RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 HMGN5P82970 282 aaKnown RBP20.1■□□□□ 0.81
SMARCC2-202ENST00000347471 DIXDC1Q155Q3 683 aa20.1■□□□□ 0.81
SMARCC2-202ENST00000347471 ANKRD2Q9GZV1 360 aa20.1■□□□□ 0.81
SMARCC2-202ENST00000347471 DHX16O60231 1041 aaKnown RBP20.09■□□□□ 0.81
SMARCC2-202ENST00000347471 GYS1P13807 737 aa20.09■□□□□ 0.81
SMARCC2-202ENST00000347471 CPLX2Q6PUV4 134 aaKnown RBP20.09■□□□□ 0.81
SMARCC2-202ENST00000347471 ZBTB43O43298 467 aa20.09■□□□□ 0.81
SMARCC2-202ENST00000347471 EVX2Q03828 476 aa20.09■□□□□ 0.81
SMARCC2-202ENST00000347471 AKNAD1Q5T1N1 836 aa20.09■□□□□ 0.81
SMARCC2-202ENST00000347471 hCG_1642624A0A1W2PR95 340 aa20.08■□□□□ 0.81
SMARCC2-202ENST00000347471 G3V3G9 751 aa20.08■□□□□ 0.81
SMARCC2-202ENST00000347471 UBE2Q2LH0YL09 131 aa20.08■□□□□ 0.81
SMARCC2-202ENST00000347471 MECOMQ03112 1051 aa20.08■□□□□ 0.81
SMARCC2-202ENST00000347471 DCAF8Q5TAQ9 597 aa20.08■□□□□ 0.81
SMARCC2-202ENST00000347471 OLFM4Q6UX06 510 aa20.08■□□□□ 0.81
SMARCC2-202ENST00000347471 USP17L12C9JPN9 530 aa20.08■□□□□ 0.81
SMARCC2-202ENST00000347471 USP17L21D6R901 530 aa20.08■□□□□ 0.81
SMARCC2-202ENST00000347471 ME1P48163 572 aa20.08■□□□□ 0.81
SMARCC2-202ENST00000347471 SART3Q15020 963 aaKnown RBP20.08■□□□□ 0.81
SMARCC2-202ENST00000347471 SLC26A6Q9BXS9 759 aa20.08■□□□□ 0.81
SMARCC2-202ENST00000347471 TSPY26PQ9H489 355 aa20.08■□□□□ 0.81
SMARCC2-202ENST00000347471 SLC10A5Q5PT55 438 aa20.08■□□□□ 0.8
SMARCC2-202ENST00000347471 LIG1P18858 919 aa20.07■□□□□ 0.8
SMARCC2-202ENST00000347471 PPARAQ07869 468 aa20.07■□□□□ 0.8
SMARCC2-202ENST00000347471 ZNF274Q96GC6 653 aaPredicted RBP20.07■□□□□ 0.8
SMARCC2-202ENST00000347471 CARMIL3Q8ND23 1372 aa20.07■□□□□ 0.8
SMARCC2-202ENST00000347471 TAF1P21675 1872 aa20.07■□□□□ 0.8
SMARCC2-202ENST00000347471 LRSAM1Q6UWE0 723 aa20.07■□□□□ 0.8
SMARCC2-202ENST00000347471 USP5P45974 858 aa20.06■□□□□ 0.8
SMARCC2-202ENST00000347471 GRAPQ13588 217 aa20.06■□□□□ 0.8
SMARCC2-202ENST00000347471 WTAPQ15007 396 aa20.06■□□□□ 0.8
SMARCC2-202ENST00000347471 GRAPLQ8TC17 118 aaPredicted RBP20.06■□□□□ 0.8
SMARCC2-202ENST00000347471 ZNF622Q969S3 477 aaKnown RBP eCLIP20.06■□□□□ 0.83e-7■■□□□ 12.6
SMARCC2-202ENST00000347471 DACT1Q9NYF0 836 aa20.06■□□□□ 0.8
SMARCC2-202ENST00000347471 FAM47AQ5JRC9 791 aa20.06■□□□□ 0.8
SMARCC2-202ENST00000347471 LEO1Q8WVC0 666 aaPredicted RBP20.05■□□□□ 0.8
SMARCC2-202ENST00000347471 ALG1Q9BT22 464 aa20.05■□□□□ 0.8
SMARCC2-202ENST00000347471 ALDH8A1Q9H2A2 487 aaPredicted RBP20.05■□□□□ 0.8
SMARCC2-202ENST00000347471 MCM9Q9NXL9 1143 aa20.05■□□□□ 0.8
SMARCC2-202ENST00000347471 PTMAP06454 111 aaKnown RBP20.05■□□□□ 0.8
SMARCC2-202ENST00000347471 CYP2D6P10635 497 aa20.05■□□□□ 0.8
SMARCC2-202ENST00000347471 CCDC183Q5T5S1 534 aa20.05■□□□□ 0.8
SMARCC2-202ENST00000347471 APOA5Q6Q788 366 aa20.05■□□□□ 0.8
SMARCC2-202ENST00000347471 SCAND2PQ9GZW5 306 aaPredicted RBP20.05■□□□□ 0.8
SMARCC2-202ENST00000347471 LDHBP07195 334 aaKnown RBP20.04■□□□□ 0.8
SMARCC2-202ENST00000347471 GNAT2P19087 354 aa20.04■□□□□ 0.8
SMARCC2-202ENST00000347471 CDC27P30260 824 aa20.04■□□□□ 0.8
SMARCC2-202ENST00000347471 IARSP41252 1262 aaKnown RBP20.04■□□□□ 0.8
SMARCC2-202ENST00000347471 ZNF445P59923 1031 aa20.04■□□□□ 0.8
SMARCC2-202ENST00000347471 SAP30BPQ9UHR5 308 aaKnown RBP20.04■□□□□ 0.8
SMARCC2-202ENST00000347471 FDPSP14324 419 aaKnown RBP20.04■□□□□ 0.8
SMARCC2-202ENST00000347471 GPSM2P81274 684 aa20.04■□□□□ 0.8
SMARCC2-202ENST00000347471 USP28Q96RU2 1077 aa20.04■□□□□ 0.8
SMARCC2-202ENST00000347471 SH2B2O14492 632 aaPredicted RBP20.03■□□□□ 0.8
SMARCC2-202ENST00000347471 TM4SF1P30408 202 aa20.03■□□□□ 0.8
SMARCC2-202ENST00000347471 TRIM29Q14134 588 aa20.03■□□□□ 0.8
SMARCC2-202ENST00000347471 LLPHQ9BRT6 129 aaKnown RBP20.03■□□□□ 0.8
SMARCC2-202ENST00000347471 NOL10Q9BSC4 688 aaKnown RBP20.03■□□□□ 0.8
SMARCC2-202ENST00000347471 HPS5Q9UPZ3 1129 aa20.03■□□□□ 0.8
SMARCC2-202ENST00000347471 DDR1Q08345 913 aa20.03■□□□□ 0.8
SMARCC2-202ENST00000347471 STK38Q15208 465 aa20.03■□□□□ 0.8
SMARCC2-202ENST00000347471 KRT23Q9C075 422 aa20.03■□□□□ 0.8
SMARCC2-202ENST00000347471 TACC3Q9Y6A5 838 aa20.03■□□□□ 0.8
SMARCC2-202ENST00000347471 COL4A1P02462 1669 aa20.03■□□□□ 0.8
SMARCC2-202ENST00000347471 FBXO33Q7Z6M2 555 aa20.03■□□□□ 0.8
SMARCC2-202ENST00000347471 ERCC4Q92889 916 aaPredicted RBP20.03■□□□□ 0.8
SMARCC2-202ENST00000347471 RESTQ13127 1097 aa20.02■□□□□ 0.8
SMARCC2-202ENST00000347471 PROM2Q8N271 834 aa20.02■□□□□ 0.8
SMARCC2-202ENST00000347471 SMARCC2Q8TAQ2 1214 aa20.02■□□□□ 0.8
SMARCC2-202ENST00000347471 NWD2Q9ULI1 1742 aa20.02■□□□□ 0.8
SMARCC2-202ENST00000347471 GRIK5Q16478 980 aa20.02■□□□□ 0.8
SMARCC2-202ENST00000347471 CRNKL1Q9BZJ0 848 aaKnown RBP20.02■□□□□ 0.8
SMARCC2-202ENST00000347471 GGA1Q9UJY5 639 aa20.02■□□□□ 0.8
SMARCC2-202ENST00000347471 RTL9Q8NET4 1388 aa20.02■□□□□ 0.79
SMARCC2-202ENST00000347471 NSUN4Q96CB9 384 aaKnown RBP20.02■□□□□ 0.79
SMARCC2-202ENST00000347471 NUP62CLQ9H1M0 184 aa20.02■□□□□ 0.79
SMARCC2-202ENST00000347471 TNMDQ9H2S6 317 aa20.02■□□□□ 0.79
SMARCC2-202ENST00000347471 CFAP45Q9UL16 551 aa20.02■□□□□ 0.79
SMARCC2-202ENST00000347471 RNF41Q9H4P4 317 aaPredicted RBP20.01■□□□□ 0.79
SMARCC2-202ENST00000347471 TCHHQ07283 1943 aa20.01■□□□□ 0.79
SMARCC2-202ENST00000347471 NMT2O60551 498 aa20.01■□□□□ 0.79
SMARCC2-202ENST00000347471 ZNF827Q17R98 1081 aa20.01■□□□□ 0.79
SMARCC2-202ENST00000347471 ZNF804AQ7Z570 1209 aa20.01■□□□□ 0.79
SMARCC2-202ENST00000347471 ESR2Q92731 530 aa20.01■□□□□ 0.79
SMARCC2-202ENST00000347471 RBM17Q96I25 401 aaKnown RBP20.01■□□□□ 0.79
SMARCC2-202ENST00000347471 CNNM2Q9H8M5 875 aa20.01■□□□□ 0.79
SMARCC2-202ENST00000347471 USP17L8P0C7I0 530 aa20.01■□□□□ 0.79
SMARCC2-202ENST00000347471 TMX4Q9H1E5 349 aaPredicted RBP20.01■□□□□ 0.79
SMARCC2-202ENST00000347471 MARCKSP29966 332 aaPredicted RBP20■□□□□ 0.79
SMARCC2-202ENST00000347471 AKAP17AQ02040 695 aaKnown RBP20■□□□□ 0.79
SMARCC2-202ENST00000347471 ZNF384Q8TF68 577 aa20■□□□□ 0.79
SMARCC2-202ENST00000347471 MMP10P09238 476 aa20■□□□□ 0.79
SMARCC2-202ENST00000347471 DOK7Q18PE1 504 aa20■□□□□ 0.79
SMARCC2-202ENST00000347471 MAPKAPK5Q8IW41 473 aa20■□□□□ 0.79
SMARCC2-202ENST00000347471 ZSCAN16Q9H4T2 348 aaPredicted RBP20■□□□□ 0.79
SMARCC2-202ENST00000347471 XDHP47989 1333 aa20■□□□□ 0.79
SMARCC2-202ENST00000347471 A0A087WWV3 80 aa20■□□□□ 0.79
SMARCC2-202ENST00000347471 TSPY2A6NKD2 308 aa20■□□□□ 0.79
SMARCC2-202ENST00000347471 RTN1Q16799 776 aa20■□□□□ 0.79
SMARCC2-202ENST00000347471 TGFBRAP1Q8WUH2 860 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms