RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 RIOK1Q9BRS2 568 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP1-202ENST00000346416 CNNM2Q9H8M5 875 aa16.56■□□□□ 0.24
CDK5RAP1-202ENST00000346416 ANKIB1Q9P2G1 1089 aa16.56■□□□□ 0.24
CDK5RAP1-202ENST00000346416 TACC3Q9Y6A5 838 aa16.56■□□□□ 0.24
CDK5RAP1-202ENST00000346416 ELP1O95163 1332 aa16.56■□□□□ 0.24
CDK5RAP1-202ENST00000346416 PDS5AQ29RF7 1337 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP1-202ENST00000346416 MYH13Q9UKX3 1938 aa16.56■□□□□ 0.24
CDK5RAP1-202ENST00000346416 KDM4AO75164 1064 aa16.55■□□□□ 0.24
CDK5RAP1-202ENST00000346416 SLC51AQ86UW1 340 aa16.55■□□□□ 0.24
CDK5RAP1-202ENST00000346416 IGDCC4Q8TDY8 1250 aa16.55■□□□□ 0.24
CDK5RAP1-202ENST00000346416 SDR42E1Q8WUS8 393 aa16.55■□□□□ 0.24
CDK5RAP1-202ENST00000346416 RBSNQ9H1K0 784 aa16.55■□□□□ 0.24
CDK5RAP1-202ENST00000346416 ZSWIM5Q9P217 1185 aa16.55■□□□□ 0.24
CDK5RAP1-202ENST00000346416 CPLX1O14810 134 aa16.55■□□□□ 0.24
CDK5RAP1-202ENST00000346416 SERPINB2P05120 415 aa16.55■□□□□ 0.24
CDK5RAP1-202ENST00000346416 CCDC183Q5T5S1 534 aa16.55■□□□□ 0.24
CDK5RAP1-202ENST00000346416 PROM2Q8N271 834 aa16.55■□□□□ 0.24
CDK5RAP1-202ENST00000346416 STAG1Q8WVM7 1258 aa16.55■□□□□ 0.24
CDK5RAP1-202ENST00000346416 SPATA32Q96LK8 384 aa16.55■□□□□ 0.24
CDK5RAP1-202ENST00000346416 SENP2Q9HC62 589 aa16.55■□□□□ 0.24
CDK5RAP1-202ENST00000346416 IRS2Q9Y4H2 1338 aa16.55■□□□□ 0.24
CDK5RAP1-202ENST00000346416 TIAM2Q8IVF5 1701 aa16.55■□□□□ 0.24
CDK5RAP1-202ENST00000346416 TXNRD1Q16881 649 aa16.54■□□□□ 0.24
CDK5RAP1-202ENST00000346416 NSUN4Q96CB9 384 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP1-202ENST00000346416 KRT23Q9C075 422 aa16.54■□□□□ 0.24
CDK5RAP1-202ENST00000346416 ST5P78524 1137 aa16.54■□□□□ 0.24
CDK5RAP1-202ENST00000346416 CHAF1AQ13111 956 aaPredicted RBP16.54■□□□□ 0.24
CDK5RAP1-202ENST00000346416 TMEM67Q5HYA8 995 aa16.54■□□□□ 0.24
CDK5RAP1-202ENST00000346416 APOA5Q6Q788 366 aa16.54■□□□□ 0.24
CDK5RAP1-202ENST00000346416 LEO1Q8WVC0 666 aaPredicted RBP16.54■□□□□ 0.24
CDK5RAP1-202ENST00000346416 RPGRQ92834 1020 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP1-202ENST00000346416 LY9Q9HBG7 655 aa16.54■□□□□ 0.24
CDK5RAP1-202ENST00000346416 DYNLL1P63167 89 aaKnown RBP16.53■□□□□ 0.24
CDK5RAP1-202ENST00000346416 GUCY1B3Q02153 619 aa16.53■□□□□ 0.24
CDK5RAP1-202ENST00000346416 MECOMQ03112 1051 aa16.53■□□□□ 0.24
CDK5RAP1-202ENST00000346416 PPARAQ07869 468 aa16.53■□□□□ 0.24
CDK5RAP1-202ENST00000346416 CRY2Q49AN0 593 aa16.53■□□□□ 0.24
CDK5RAP1-202ENST00000346416 TOMM22Q9NS69 142 aa16.53■□□□□ 0.24
CDK5RAP1-202ENST00000346416 LEMD3Q9Y2U8 911 aa16.53■□□□□ 0.24
CDK5RAP1-202ENST00000346416 METAP2P50579 478 aaKnown RBP eCLIP16.52■□□□□ 0.24
CDK5RAP1-202ENST00000346416 RRP12Q5JTH9 1297 aaKnown RBP16.52■□□□□ 0.24
CDK5RAP1-202ENST00000346416 NFXL1Q6ZNB6 911 aa16.52■□□□□ 0.24
CDK5RAP1-202ENST00000346416 SGMS1Q86VZ5 419 aa16.52■□□□□ 0.24
CDK5RAP1-202ENST00000346416 STK11IPQ8N1F8 1099 aa16.52■□□□□ 0.24
CDK5RAP1-202ENST00000346416 ORC3Q9UBD5 711 aaPredicted RBP16.52■□□□□ 0.24
CDK5RAP1-202ENST00000346416 XDHP47989 1333 aa16.52■□□□□ 0.23
CDK5RAP1-202ENST00000346416 MINDY4BA8MYZ0 360 aa16.52■□□□□ 0.23
CDK5RAP1-202ENST00000346416 IFIT3O14879 490 aaKnown RBP16.52■□□□□ 0.23
CDK5RAP1-202ENST00000346416 RXRAP19793 462 aa16.52■□□□□ 0.23
CDK5RAP1-202ENST00000346416 PRDX5P30044 214 aa16.52■□□□□ 0.23
CDK5RAP1-202ENST00000346416 ADD1P35611 737 aaKnown RBP16.52■□□□□ 0.23
CDK5RAP1-202ENST00000346416 LIFRP42702 1097 aa16.52■□□□□ 0.23
CDK5RAP1-202ENST00000346416 RNF41Q9H4P4 317 aaPredicted RBP16.52■□□□□ 0.23
CDK5RAP1-202ENST00000346416 CFAP45Q9UL16 551 aa16.52■□□□□ 0.23
CDK5RAP1-202ENST00000346416 JAG2Q9Y219 1238 aa16.52■□□□□ 0.23
CDK5RAP1-202ENST00000346416 ZBTB43O43298 467 aa16.51■□□□□ 0.23
CDK5RAP1-202ENST00000346416 DDR1Q08345 913 aa16.51■□□□□ 0.23
CDK5RAP1-202ENST00000346416 MICU3Q86XE3 530 aa16.51■□□□□ 0.23
CDK5RAP1-202ENST00000346416 RBM6P78332 1123 aaKnown RBP16.51■□□□□ 0.23
CDK5RAP1-202ENST00000346416 C8orf76Q96K31 380 aa16.51■□□□□ 0.23
CDK5RAP1-202ENST00000346416 BRIP1Q9BX63 1249 aa16.51■□□□□ 0.23
CDK5RAP1-202ENST00000346416 TSPY26PQ9H489 355 aa16.51■□□□□ 0.23
CDK5RAP1-202ENST00000346416 ANAPC4Q9UJX5 808 aa16.51■□□□□ 0.23
CDK5RAP1-202ENST00000346416 GOLGA6L4A6NEF3 574 aa16.5■□□□□ 0.23
CDK5RAP1-202ENST00000346416 ZBTB22O15209 634 aa16.5■□□□□ 0.23
CDK5RAP1-202ENST00000346416 LETM1O95202 739 aaPredicted RBP16.5■□□□□ 0.23
CDK5RAP1-202ENST00000346416 BAZ2AQ9UIF9 1905 aaKnown RBP16.5■□□□□ 0.23
CDK5RAP1-202ENST00000346416 SMIM22K7EJ46 135 aa16.49■□□□□ 0.23
CDK5RAP1-202ENST00000346416 POLRMTO00411 1230 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP1-202ENST00000346416 CDC27P30260 824 aa16.49■□□□□ 0.23
CDK5RAP1-202ENST00000346416 SART3Q15020 963 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP1-202ENST00000346416 OTUD7BQ6GQQ9 843 aa16.49■□□□□ 0.23
CDK5RAP1-202ENST00000346416 CCDC144CPQ8IYA2 1237 aa16.49■□□□□ 0.23
CDK5RAP1-202ENST00000346416 FBXO18Q8NFZ0 1043 aa16.49■□□□□ 0.23
CDK5RAP1-202ENST00000346416 ANP32BQ92688 251 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP1-202ENST00000346416 RBM17Q96I25 401 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP1-202ENST00000346416 ZKSCAN3Q9BRR0 538 aa16.49■□□□□ 0.23
CDK5RAP1-202ENST00000346416 MYL10Q9BUA6 226 aa16.49■□□□□ 0.23
CDK5RAP1-202ENST00000346416 SLC12A7Q9Y666 1083 aa16.49■□□□□ 0.23
CDK5RAP1-202ENST00000346416 MYH15Q9Y2K3 1946 aa16.49■□□□□ 0.23
CDK5RAP1-202ENST00000346416 CCDC69A6NI79 296 aa16.49■□□□□ 0.23
CDK5RAP1-202ENST00000346416 CDKL5O76039 1030 aa16.49■□□□□ 0.23
CDK5RAP1-202ENST00000346416 HMGB2P26583 209 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP1-202ENST00000346416 GPSM2P81274 684 aa16.49■□□□□ 0.23
CDK5RAP1-202ENST00000346416 ZNF772Q68DY9 489 aaPredicted RBP16.49■□□□□ 0.23
CDK5RAP1-202ENST00000346416 ILDR1Q86SU0 546 aaPredicted RBP16.49■□□□□ 0.23
CDK5RAP1-202ENST00000346416 AATFQ9NY61 560 aaKnown RBP eCLIP16.49■□□□□ 0.23
CDK5RAP1-202ENST00000346416 CCDC88AQ3V6T2 1871 aa16.48■□□□□ 0.23
CDK5RAP1-202ENST00000346416 GOLGA8AA7E2F4 631 aa16.48■□□□□ 0.23
CDK5RAP1-202ENST00000346416 LIG1P18858 919 aa16.48■□□□□ 0.23
CDK5RAP1-202ENST00000346416 CEBPZQ03701 1054 aaKnown RBP16.48■□□□□ 0.23
CDK5RAP1-202ENST00000346416 SPTY2D1Q68D10 685 aaPredicted RBP16.48■□□□□ 0.23
CDK5RAP1-202ENST00000346416 GIMAP6Q6P9H5 292 aa16.48■□□□□ 0.23
CDK5RAP1-202ENST00000346416 CPLX2Q6PUV4 134 aaKnown RBP16.48■□□□□ 0.23
CDK5RAP1-202ENST00000346416 TDRD7Q8NHU6 1098 aaKnown RBP16.48■□□□□ 0.23
CDK5RAP1-202ENST00000346416 PGBD1Q96JS3 809 aa16.48■□□□□ 0.23
CDK5RAP1-202ENST00000346416 GPR101Q96P66 508 aaPredicted RBP16.48■□□□□ 0.23
CDK5RAP1-202ENST00000346416 CYP2D7A0A087X1C5 515 aa16.48■□□□□ 0.23
CDK5RAP1-202ENST00000346416 WTAPQ15007 396 aa16.48■□□□□ 0.23
CDK5RAP1-202ENST00000346416 TMED8Q6PL24 325 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms