RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 TMC4Q7Z404 712 aa17.21■□□□□ 0.35
PBX3-201ENST00000342287 IRS2Q9Y4H2 1338 aa17.21■□□□□ 0.35
PBX3-201ENST00000342287 SLFN14P0C7P3 912 aa17.21■□□□□ 0.35
PBX3-201ENST00000342287 PDE6BP35913 854 aa17.21■□□□□ 0.35
PBX3-201ENST00000342287 IMMTQ16891 758 aaKnown RBP17.21■□□□□ 0.35
PBX3-201ENST00000342287 STRBPQ96SI9 672 aaKnown RBP17.21■□□□□ 0.35
PBX3-201ENST00000342287 TXNRD3Q86VQ6 643 aa17.2■□□□□ 0.34
PBX3-201ENST00000342287 NSFL1CQ9UNZ2 370 aaKnown RBP17.2■□□□□ 0.34
PBX3-201ENST00000342287 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.2■□□□□ 0.34
PBX3-201ENST00000342287 PATL2C9JE40 543 aaKnown RBP17.2■□□□□ 0.34
PBX3-201ENST00000342287 GPSM2P81274 684 aa17.2■□□□□ 0.34
PBX3-201ENST00000342287 GABPB1Q06547 395 aaPredicted RBP17.2■□□□□ 0.34
PBX3-201ENST00000342287 MSL1Q68DK7 614 aa17.2■□□□□ 0.34
PBX3-201ENST00000342287 TTLL5Q6EMB2 1281 aa17.2■□□□□ 0.34
PBX3-201ENST00000342287 C15orf52Q6ZUT6 534 aaKnown RBP17.2■□□□□ 0.34
PBX3-201ENST00000342287 OGFRQ9NZT2 677 aa17.2■□□□□ 0.34
PBX3-201ENST00000342287 RAI14Q9P0K7 980 aa17.2■□□□□ 0.34
PBX3-201ENST00000342287 ATP2B4P23634 1241 aa17.19■□□□□ 0.34
PBX3-201ENST00000342287 BAG6P46379 1132 aa17.19■□□□□ 0.34
PBX3-201ENST00000342287 NUCB2P80303 420 aa17.19■□□□□ 0.34
PBX3-201ENST00000342287 LARP6Q9BRS8 491 aaKnown RBP17.19■□□□□ 0.34
PBX3-201ENST00000342287 SH2B1Q9NRF2 756 aaPredicted RBP17.19■□□□□ 0.34
PBX3-201ENST00000342287 DOCK2Q92608 1830 aa17.19■□□□□ 0.34
PBX3-201ENST00000342287 COL1A1P02452 1464 aaPredicted RBP17.19■□□□□ 0.34
PBX3-201ENST00000342287 E7EWF7 191 aa17.19■□□□□ 0.34
PBX3-201ENST00000342287 PRR29P0C7W0 189 aa17.19■□□□□ 0.34
PBX3-201ENST00000342287 SRGNP10124 158 aa17.19■□□□□ 0.34
PBX3-201ENST00000342287 NPR1P16066 1061 aa17.19■□□□□ 0.34
PBX3-201ENST00000342287 COL9A3Q14050 684 aaPredicted RBP17.19■□□□□ 0.34
PBX3-201ENST00000342287 STOX1Q6ZVD7 989 aa17.19■□□□□ 0.34
PBX3-201ENST00000342287 NRXN2Q9P2S2 1712 aa17.19■□□□□ 0.34
PBX3-201ENST00000342287 FAM193AP78312 1265 aa17.18■□□□□ 0.34
PBX3-201ENST00000342287 FEZ1Q99689 392 aa17.18■□□□□ 0.34
PBX3-201ENST00000342287 GGA1Q9UJY5 639 aa17.18■□□□□ 0.34
PBX3-201ENST00000342287 MYO5AQ9Y4I1 1855 aaKnown RBP17.18■□□□□ 0.34
PBX3-201ENST00000342287 MBD4O95243 580 aa17.18■□□□□ 0.34
PBX3-201ENST00000342287 CYP7A1P22680 504 aa17.18■□□□□ 0.34
PBX3-201ENST00000342287 TNNT3P45378 269 aaPredicted RBP17.18■□□□□ 0.34
PBX3-201ENST00000342287 SLC51AQ86UW1 340 aa17.18■□□□□ 0.34
PBX3-201ENST00000342287 SP8Q8IXZ3 490 aa17.18■□□□□ 0.34
PBX3-201ENST00000342287 LOC102724159A0A0B4J2E5 919 aa17.17■□□□□ 0.34
PBX3-201ENST00000342287 A0A0G2JLW4 131 aa17.17■□□□□ 0.34
PBX3-201ENST00000342287 ZNF213O14771 459 aa17.17■□□□□ 0.34
PBX3-201ENST00000342287 GNAT2P19087 354 aa17.17■□□□□ 0.34
PBX3-201ENST00000342287 ALDH1B1P30837 517 aa17.17■□□□□ 0.34
PBX3-201ENST00000342287 PWP2Q15269 919 aaKnown RBP17.17■□□□□ 0.34
PBX3-201ENST00000342287 DHX32Q7L7V1 743 aaKnown RBP17.17■□□□□ 0.34
PBX3-201ENST00000342287 ZNF804AQ7Z570 1209 aa17.17■□□□□ 0.34
PBX3-201ENST00000342287 PPEF1O14829 653 aaPredicted RBP17.17■□□□□ 0.34
PBX3-201ENST00000342287 UFL1O94874 794 aa17.17■□□□□ 0.34
PBX3-201ENST00000342287 C17orf53Q8N3J3 647 aaPredicted RBP17.17■□□□□ 0.34
PBX3-201ENST00000342287 TCEANC2Q96MN5 208 aa17.17■□□□□ 0.34
PBX3-201ENST00000342287 TULP2O00295 520 aa17.17■□□□□ 0.34
PBX3-201ENST00000342287 ALX1Q15699 326 aa17.17■□□□□ 0.34
PBX3-201ENST00000342287 RNF214Q8ND24 703 aa17.17■□□□□ 0.34
PBX3-201ENST00000342287 ARMT1Q9H993 441 aa17.17■□□□□ 0.34
PBX3-201ENST00000342287 TPCN1Q9ULQ1 816 aa17.17■□□□□ 0.34
PBX3-201ENST00000342287 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.17■□□□□ 0.34
PBX3-201ENST00000342287 TOB2Q14106 344 aaPredicted RBP17.16■□□□□ 0.34
PBX3-201ENST00000342287 NOLC1Q14978 699 aaKnown RBP eCLIP17.16■□□□□ 0.34
PBX3-201ENST00000342287 HAND2P61296 217 aa17.16■□□□□ 0.34
PBX3-201ENST00000342287 CHAF1AQ13111 956 aaPredicted RBP17.16■□□□□ 0.34
PBX3-201ENST00000342287 TDRD7Q8NHU6 1098 aaKnown RBP17.16■□□□□ 0.34
PBX3-201ENST00000342287 MASTLQ96GX5 879 aa17.16■□□□□ 0.34
PBX3-201ENST00000342287 CALCOCO1Q9P1Z2 691 aa17.16■□□□□ 0.34
PBX3-201ENST00000342287 ATP6V0A2Q9Y487 856 aa17.16■□□□□ 0.34
PBX3-201ENST00000342287 ME3Q16798 604 aa17.15■□□□□ 0.34
PBX3-201ENST00000342287 TMED8Q6PL24 325 aaPredicted RBP17.15■□□□□ 0.34
PBX3-201ENST00000342287 GEMIN8Q9NWZ8 242 aaKnown RBP17.15■□□□□ 0.34
PBX3-201ENST00000342287 ZMYM6O95789 1325 aa17.15■□□□□ 0.34
PBX3-201ENST00000342287 LARGE1O95461 756 aa17.15■□□□□ 0.34
PBX3-201ENST00000342287 EXOSC10Q01780 885 aaKnown RBP17.15■□□□□ 0.34
PBX3-201ENST00000342287 SPTY2D1Q68D10 685 aaPredicted RBP17.15■□□□□ 0.34
PBX3-201ENST00000342287 MCTP1Q6DN14 999 aa17.15■□□□□ 0.34
PBX3-201ENST00000342287 NAA16Q6N069 864 aaPredicted RBP17.15■□□□□ 0.34
PBX3-201ENST00000342287 Q6ZUG5 572 aa17.15■□□□□ 0.34
PBX3-201ENST00000342287 IFNL3Q8IZI9 196 aa17.15■□□□□ 0.34
PBX3-201ENST00000342287 MIGA1Q8NAN2 632 aa17.15■□□□□ 0.34
PBX3-201ENST00000342287 DEFB132Q7Z7B7 95 aa17.14■□□□□ 0.33
PBX3-201ENST00000342287 LCORLQ8N3X6 602 aa17.14■□□□□ 0.33
PBX3-201ENST00000342287 TBC1D16Q8TBP0 767 aa17.14■□□□□ 0.33
PBX3-201ENST00000342287 WDR66Q8TBY9 1149 aa17.14■□□□□ 0.33
PBX3-201ENST00000342287 NACAP1Q9BZK3 213 aa17.14■□□□□ 0.33
PBX3-201ENST00000342287 MAGEB6P1A0A0J9YX57 407 aa17.14■□□□□ 0.33
PBX3-201ENST00000342287 BAG4O95429 457 aaKnown RBP17.14■□□□□ 0.33
PBX3-201ENST00000342287 ADGRA1Q86SQ6 560 aa17.14■□□□□ 0.33
PBX3-201ENST00000342287 NSUN4Q96CB9 384 aaKnown RBP17.14■□□□□ 0.33
PBX3-201ENST00000342287 SLC4A4Q9Y6R1 1079 aa17.14■□□□□ 0.33
PBX3-201ENST00000342287 ANKRD31Q8N7Z5 1873 aa17.14■□□□□ 0.33
PBX3-201ENST00000342287 GSG1L2A8MUP6 293 aa17.13■□□□□ 0.33
PBX3-201ENST00000342287 EP400NLQ6ZTU2 488 aa17.13■□□□□ 0.33
PBX3-201ENST00000342287 GPR101Q96P66 508 aaPredicted RBP17.13■□□□□ 0.33
PBX3-201ENST00000342287 NAPBQ9H115 298 aa17.13■□□□□ 0.33
PBX3-201ENST00000342287 POLLQ9UGP5 575 aa17.13■□□□□ 0.33
PBX3-201ENST00000342287 SALL1Q9NSC2 1324 aa17.13■□□□□ 0.33
PBX3-201ENST00000342287 MECOMQ03112 1051 aa17.13■□□□□ 0.33
PBX3-201ENST00000342287 CCDC83Q8IWF9 413 aa17.13■□□□□ 0.33
PBX3-201ENST00000342287 RBM27Q9P2N5 1060 aaKnown RBP17.13■□□□□ 0.33
PBX3-201ENST00000342287 C6orf229H3BNL8 230 aa17.12■□□□□ 0.33
PBX3-201ENST00000342287 TERF2Q15554 542 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms