RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 APOBRQ0VD83 1088 aa13.05□□□□□ -0.32
LRP1-202ENST00000338962 SCRN1Q12765 414 aa13.05□□□□□ -0.32
LRP1-202ENST00000338962 CHST3Q7LGC8 479 aa13.05□□□□□ -0.32
LRP1-202ENST00000338962 PSMD1Q99460 953 aa13.05□□□□□ -0.32
LRP1-202ENST00000338962 RBM27Q9P2N5 1060 aaKnown RBP13.05□□□□□ -0.32
LRP1-202ENST00000338962 NAP1L2Q9ULW6 460 aaPredicted RBP13.05□□□□□ -0.32
LRP1-202ENST00000338962 TCRBV5S4A2TA0A5A2 114 aa13.04□□□□□ -0.32
LRP1-202ENST00000338962 FIBPO43427 364 aa13.04□□□□□ -0.32
LRP1-202ENST00000338962 JAK2O60674 1132 aa13.04□□□□□ -0.32
LRP1-202ENST00000338962 ATP2B4P23634 1241 aa13.04□□□□□ -0.32
LRP1-202ENST00000338962 MCM5P33992 734 aa13.04□□□□□ -0.32
LRP1-202ENST00000338962 UBE4AQ14139 1066 aa13.04□□□□□ -0.32
LRP1-202ENST00000338962 CDC37L1Q7L3B6 337 aa13.04□□□□□ -0.32
LRP1-202ENST00000338962 MAGEB6Q8N7X4 407 aa13.04□□□□□ -0.32
LRP1-202ENST00000338962 NCOA7Q8NI08 942 aa13.04□□□□□ -0.32
LRP1-202ENST00000338962 LLPHQ9BRT6 129 aaKnown RBP13.04□□□□□ -0.32
LRP1-202ENST00000338962 PANK2Q9BZ23 570 aa13.04□□□□□ -0.32
LRP1-202ENST00000338962 TMEM63CQ9P1W3 806 aa13.04□□□□□ -0.32
LRP1-202ENST00000338962 ANKIB1Q9P2G1 1089 aa13.04□□□□□ -0.32
LRP1-202ENST00000338962 ZNF219Q9P2Y4 722 aaPredicted RBP13.04□□□□□ -0.32
LRP1-202ENST00000338962 BRCA1P38398 1863 aaKnown RBP13.04□□□□□ -0.32
LRP1-202ENST00000338962 DNM1Q05193 864 aaKnown RBP13.04□□□□□ -0.32
LRP1-202ENST00000338962 TRDNQ13061 729 aa13.04□□□□□ -0.32
LRP1-202ENST00000338962 DPP8Q6V1X1 898 aaPredicted RBP13.04□□□□□ -0.32
LRP1-202ENST00000338962 FBXL16Q8N461 479 aa13.04□□□□□ -0.32
LRP1-202ENST00000338962 FAM184AQ8NB25 1140 aa13.04□□□□□ -0.32
LRP1-202ENST00000338962 TBC1D16Q8TBP0 767 aa13.04□□□□□ -0.32
LRP1-202ENST00000338962 CHMP4CQ96CF2 233 aa13.04□□□□□ -0.32
LRP1-202ENST00000338962 GNL3LQ9NVN8 582 aaKnown RBP13.04□□□□□ -0.32
LRP1-202ENST00000338962 POLLQ9UGP5 575 aa13.04□□□□□ -0.32
LRP1-202ENST00000338962 KIF3AQ9Y496 699 aa13.04□□□□□ -0.32
LRP1-202ENST00000338962 LTBP3Q9NS15 1303 aa13.04□□□□□ -0.32
LRP1-202ENST00000338962 TCHHQ07283 1943 aa13.03□□□□□ -0.32
LRP1-202ENST00000338962 GADD45BO75293 160 aaPredicted RBP13.03□□□□□ -0.32
LRP1-202ENST00000338962 C15orf52Q6ZUT6 534 aaKnown RBP13.03□□□□□ -0.32
LRP1-202ENST00000338962 FERMT3Q86UX7 667 aa13.03□□□□□ -0.32
LRP1-202ENST00000338962 ZNF274Q96GC6 653 aaPredicted RBP13.03□□□□□ -0.32
LRP1-202ENST00000338962 VPS33BQ9H267 617 aa13.03□□□□□ -0.32
LRP1-202ENST00000338962 GGA1Q9UJY5 639 aa13.03□□□□□ -0.32
LRP1-202ENST00000338962 MYO5AQ9Y4I1 1855 aaKnown RBP13.03□□□□□ -0.32
LRP1-202ENST00000338962 NFKBIEO00221 500 aa13.03□□□□□ -0.32
LRP1-202ENST00000338962 GRIN3BO60391 1043 aa13.03□□□□□ -0.32
LRP1-202ENST00000338962 UBE2HP62256 183 aa13.03□□□□□ -0.32
LRP1-202ENST00000338962 HMGN5P82970 282 aaKnown RBP13.03□□□□□ -0.32
LRP1-202ENST00000338962 CAVIN4Q5BKX8 364 aa13.03□□□□□ -0.32
LRP1-202ENST00000338962 VPS37DQ86XT2 251 aa13.03□□□□□ -0.32
LRP1-202ENST00000338962 DDX11Q96FC9 970 aa13.03□□□□□ -0.32
LRP1-202ENST00000338962 STRBPQ96SI9 672 aaKnown RBP13.03□□□□□ -0.32
LRP1-202ENST00000338962 LRP2BPQ9P2M1 347 aa13.03□□□□□ -0.32
LRP1-202ENST00000338962 ZNF804BA4D1E1 1349 aa13.02□□□□□ -0.32
LRP1-202ENST00000338962 TAF1P21675 1872 aa13.02□□□□□ -0.32
LRP1-202ENST00000338962 WTIPA6NIX2 430 aaPredicted RBP13.02□□□□□ -0.33
LRP1-202ENST00000338962 H3BQV1 296 aa13.02□□□□□ -0.33
LRP1-202ENST00000338962 PRC1O43663 620 aa13.02□□□□□ -0.33
LRP1-202ENST00000338962 MBD4O95243 580 aa13.02□□□□□ -0.33
LRP1-202ENST00000338962 CCT2P78371 535 aaKnown RBP13.02□□□□□ -0.33
LRP1-202ENST00000338962 KRT85P78386 507 aa13.02□□□□□ -0.33
LRP1-202ENST00000338962 GPR162Q16538 588 aa13.02□□□□□ -0.33
LRP1-202ENST00000338962 IFFO2Q5TF58 517 aa13.02□□□□□ -0.33
LRP1-202ENST00000338962 MB21D2Q8IYB1 491 aaPredicted RBP13.02□□□□□ -0.33
LRP1-202ENST00000338962 SUPT20HQ8NEM7 779 aa13.02□□□□□ -0.33
LRP1-202ENST00000338962 SMARCC2Q8TAQ2 1214 aa13.02□□□□□ -0.33
LRP1-202ENST00000338962 IRS2Q9Y4H2 1338 aa13.02□□□□□ -0.33
LRP1-202ENST00000338962 LRRC37AA6NMS7 1700 aa13.02□□□□□ -0.33
LRP1-202ENST00000338962 DOCK2Q92608 1830 aa13.02□□□□□ -0.33
LRP1-202ENST00000338962 SYCE3A1L190 88 aa13.01□□□□□ -0.33
LRP1-202ENST00000338962 PDIA3P30101 505 aaKnown RBP13.01□□□□□ -0.33
LRP1-202ENST00000338962 NSUN7Q8NE18 718 aaKnown RBP13.01□□□□□ -0.33
LRP1-202ENST00000338962 TAOK3Q9H2K8 898 aa13.01□□□□□ -0.33
LRP1-202ENST00000338962 IQSEC3Q9UPP2 1182 aaPredicted RBP13.01□□□□□ -0.33
LRP1-202ENST00000338962 PTPDC1A2A3K4 754 aa13.01□□□□□ -0.33
LRP1-202ENST00000338962 UFL1O94874 794 aa13.01□□□□□ -0.33
LRP1-202ENST00000338962 GYG1P46976 350 aa13.01□□□□□ -0.33
LRP1-202ENST00000338962 EVCP57679 992 aa13.01□□□□□ -0.33
LRP1-202ENST00000338962 NAPBQ9H115 298 aa13.01□□□□□ -0.33
LRP1-202ENST00000338962 ZMYM6O95789 1325 aa13.01□□□□□ -0.33
LRP1-202ENST00000338962 WDR19Q8NEZ3 1342 aa13.01□□□□□ -0.33
LRP1-202ENST00000338962 UTRNP46939 3433 aa13.01□□□□□ -0.33
LRP1-202ENST00000338962 NASPP49321 788 aaPredicted RBP13□□□□□ -0.33
LRP1-202ENST00000338962 ARHGAP27Q6ZUM4 889 aa13□□□□□ -0.33
LRP1-202ENST00000338962 EYA3Q99504 573 aa13□□□□□ -0.33
LRP1-202ENST00000338962 ARMT1Q9H993 441 aa13□□□□□ -0.33
LRP1-202ENST00000338962 NCOA5Q9HCD5 579 aaKnown RBP13□□□□□ -0.33
LRP1-202ENST00000338962 ABCF2Q9UG63 623 aa13□□□□□ -0.33
LRP1-202ENST00000338962 PATL2C9JE40 543 aaKnown RBP13□□□□□ -0.33
LRP1-202ENST00000338962 C6orf229H3BNL8 230 aa13□□□□□ -0.33
LRP1-202ENST00000338962 DHX16O60231 1041 aaKnown RBP13□□□□□ -0.33
LRP1-202ENST00000338962 GNAT2P19087 354 aa13□□□□□ -0.33
LRP1-202ENST00000338962 KIAA2012Q0VF49 1180 aa13□□□□□ -0.33
LRP1-202ENST00000338962 ALX1Q15699 326 aa13□□□□□ -0.33
LRP1-202ENST00000338962 LRSAM1Q6UWE0 723 aa13□□□□□ -0.33
LRP1-202ENST00000338962 TBC1D10CQ8IV04 446 aa13□□□□□ -0.33
LRP1-202ENST00000338962 NACAP1Q9BZK3 213 aa13□□□□□ -0.33
LRP1-202ENST00000338962 NBPF3Q9H094 633 aa13□□□□□ -0.33
LRP1-202ENST00000338962 KLF18A0A0U1RQI7 1052 aa12.99□□□□□ -0.33
LRP1-202ENST00000338962 ZBTB22O15209 634 aa12.99□□□□□ -0.33
LRP1-202ENST00000338962 CTDNEP1O95476 244 aa12.99□□□□□ -0.33
LRP1-202ENST00000338962 TPRNQ4KMQ1 711 aa12.99□□□□□ -0.33
LRP1-202ENST00000338962 IFNL3Q8IZI9 196 aa12.99□□□□□ -0.33
LRP1-202ENST00000338962 ANP32BQ92688 251 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms