RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 CREBRFQ8IUR6 639 aa11.26□□□□□ -0.61
MSL3-202ENST00000337339 KIAA1524Q8TCG1 905 aa11.26□□□□□ -0.61
MSL3-202ENST00000337339 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.26□□□□□ -0.61
MSL3-202ENST00000337339 STRBPQ96SI9 672 aaKnown RBP11.26□□□□□ -0.61
MSL3-202ENST00000337339 FBXO3Q9UK99 471 aa11.26□□□□□ -0.61
MSL3-202ENST00000337339 ZNF142P52746 1687 aaPredicted RBP11.26□□□□□ -0.61
MSL3-202ENST00000337339 SYKP43405 635 aa11.26□□□□□ -0.61
MSL3-202ENST00000337339 SSRP1Q08945 709 aaKnown RBP11.26□□□□□ -0.61
MSL3-202ENST00000337339 SNW1Q13573 536 aaKnown RBP11.26□□□□□ -0.61
MSL3-202ENST00000337339 CCDC144BQ3MJ40 725 aa11.26□□□□□ -0.61
MSL3-202ENST00000337339 ADALQ6DHV7 355 aa11.26□□□□□ -0.61
MSL3-202ENST00000337339 CACTINQ8WUQ7 758 aaKnown RBP11.26□□□□□ -0.61
MSL3-202ENST00000337339 SCN11AQ9UI33 1791 aa11.25□□□□□ -0.61
MSL3-202ENST00000337339 CYP2D7A0A087X1C5 515 aa11.25□□□□□ -0.61
MSL3-202ENST00000337339 PPP4R3CPQ6ZMV5 832 aa11.25□□□□□ -0.61
MSL3-202ENST00000337339 SMIM22K7EJ46 135 aa11.25□□□□□ -0.61
MSL3-202ENST00000337339 TNNT1P13805 278 aa11.25□□□□□ -0.61
MSL3-202ENST00000337339 CHRNDQ07001 517 aa11.25□□□□□ -0.61
MSL3-202ENST00000337339 WTAPQ15007 396 aa11.25□□□□□ -0.61
MSL3-202ENST00000337339 UBE3CQ15386 1083 aa11.25□□□□□ -0.61
MSL3-202ENST00000337339 TRIM22Q8IYM9 498 aa11.25□□□□□ -0.61
MSL3-202ENST00000337339 PLA2G12BQ9BX93 195 aa11.25□□□□□ -0.61
MSL3-202ENST00000337339 AGXT2Q9BYV1 514 aa11.25□□□□□ -0.61
MSL3-202ENST00000337339 BTBD18B2RXH4 712 aa11.25□□□□□ -0.61
MSL3-202ENST00000337339 PATL2C9JE40 543 aaKnown RBP11.25□□□□□ -0.61
MSL3-202ENST00000337339 KIF23Q02241 960 aaPredicted RBP11.25□□□□□ -0.61
MSL3-202ENST00000337339 RTEL1Q9NZ71 1219 aa11.25□□□□□ -0.61
MSL3-202ENST00000337339 AFDNP55196 1824 aaKnown RBP11.25□□□□□ -0.61
MSL3-202ENST00000337339 MROH5Q6ZUA9 1318 aa11.24□□□□□ -0.61
MSL3-202ENST00000337339 SKILP12757 684 aa11.24□□□□□ -0.61
MSL3-202ENST00000337339 PFKFB1P16118 471 aa11.24□□□□□ -0.61
MSL3-202ENST00000337339 FAM98CQ17RN3 349 aaKnown RBP11.24□□□□□ -0.61
MSL3-202ENST00000337339 TDRD7Q8NHU6 1098 aaKnown RBP11.24□□□□□ -0.61
MSL3-202ENST00000337339 NBPF3Q9H094 633 aa11.24□□□□□ -0.61
MSL3-202ENST00000337339 PHRF1Q9P1Y6 1649 aaKnown RBP11.24□□□□□ -0.61
MSL3-202ENST00000337339 TPM4P67936 248 aa11.24□□□□□ -0.61
MSL3-202ENST00000337339 TFCP2L1Q9NZI6 479 aa11.24□□□□□ -0.61
MSL3-202ENST00000337339 IFNKQ9P0W0 207 aa11.24□□□□□ -0.61
MSL3-202ENST00000337339 ALS2Q96Q42 1657 aa11.24□□□□□ -0.61
MSL3-202ENST00000337339 SH2B2O14492 632 aaPredicted RBP11.23□□□□□ -0.61
MSL3-202ENST00000337339 RIOK3O14730 519 aaKnown RBP11.23□□□□□ -0.61
MSL3-202ENST00000337339 SERPINC1P01008 464 aa11.23□□□□□ -0.61
MSL3-202ENST00000337339 GUCY1A2P33402 732 aa11.23□□□□□ -0.61
MSL3-202ENST00000337339 ITPK1Q13572 414 aa11.23□□□□□ -0.61
MSL3-202ENST00000337339 TMC6Q7Z403 805 aa11.23□□□□□ -0.61
MSL3-202ENST00000337339 BRAPQ7Z569 592 aa11.23□□□□□ -0.61
MSL3-202ENST00000337339 PDCL3Q9H2J4 239 aa11.23□□□□□ -0.61
MSL3-202ENST00000337339 EPB41L4AQ9HCS5 686 aaPredicted RBP11.23□□□□□ -0.61
MSL3-202ENST00000337339 KIAA1468Q9P260 1216 aa11.23□□□□□ -0.61
MSL3-202ENST00000337339 CDHR2Q9BYE9 1310 aa11.23□□□□□ -0.61
MSL3-202ENST00000337339 DYNC1I1O14576 645 aa11.23□□□□□ -0.61
MSL3-202ENST00000337339 WDHD1O75717 1129 aaPredicted RBP11.23□□□□□ -0.61
MSL3-202ENST00000337339 RTN1Q16799 776 aa11.23□□□□□ -0.61
MSL3-202ENST00000337339 AKNAD1Q5T1N1 836 aa11.23□□□□□ -0.61
MSL3-202ENST00000337339 CNNM3Q8NE01 707 aa11.23□□□□□ -0.61
MSL3-202ENST00000337339 PNOCQ13519 176 aa11.23□□□□□ -0.61
MSL3-202ENST00000337339 ANKRD18AQ8IVF6 992 aa11.23□□□□□ -0.61
MSL3-202ENST00000337339 FMR1NBQ8N0W7 255 aaPredicted RBP11.23□□□□□ -0.61
MSL3-202ENST00000337339 JMYQ8N9B5 988 aa11.23□□□□□ -0.61
MSL3-202ENST00000337339 DYNLL1P63167 89 aaKnown RBP11.22□□□□□ -0.61
MSL3-202ENST00000337339 IQCB1Q15051 598 aa11.22□□□□□ -0.61
MSL3-202ENST00000337339 CAVIN4Q5BKX8 364 aa11.22□□□□□ -0.61
MSL3-202ENST00000337339 ZNF34Q8IZ26 560 aa11.22□□□□□ -0.61
MSL3-202ENST00000337339 VGLL2Q8N8G2 317 aa11.22□□□□□ -0.61
MSL3-202ENST00000337339 GNL3LQ9NVN8 582 aaKnown RBP11.22□□□□□ -0.61
MSL3-202ENST00000337339 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.22□□□□□ -0.61
MSL3-202ENST00000337339 V9GYY5 206 aaPredicted RBP11.22□□□□□ -0.61
MSL3-202ENST00000337339 ZMYM6O95789 1325 aa11.22□□□□□ -0.61
MSL3-202ENST00000337339 KDM4FA0A1W2PPD8 638 aa11.22□□□□□ -0.61
MSL3-202ENST00000337339 ERVV-1B6SEH8 477 aa11.22□□□□□ -0.61
MSL3-202ENST00000337339 CDK11BP21127 795 aaKnown RBP11.22□□□□□ -0.61
MSL3-202ENST00000337339 EIF5P55010 431 aaKnown RBP11.22□□□□□ -0.61
MSL3-202ENST00000337339 NR5A1Q13285 461 aa11.22□□□□□ -0.61
MSL3-202ENST00000337339 CFAP100Q494V2 611 aa11.22□□□□□ -0.61
MSL3-202ENST00000337339 ERFEQ4G0M1 354 aa11.22□□□□□ -0.61
MSL3-202ENST00000337339 DIS3L2Q8IYB7 885 aaKnown RBP11.22□□□□□ -0.61
MSL3-202ENST00000337339 ENGASEQ8NFI3 743 aa11.22□□□□□ -0.61
MSL3-202ENST00000337339 MYRIPQ8NFW9 859 aa11.22□□□□□ -0.61
MSL3-202ENST00000337339 TMEM87BQ96K49 555 aa11.22□□□□□ -0.61
MSL3-202ENST00000337339 SALL1Q9NSC2 1324 aa11.22□□□□□ -0.61
MSL3-202ENST00000337339 MRC1P22897 1456 aa11.22□□□□□ -0.61
MSL3-202ENST00000337339 GSG1L2A8MUP6 293 aa11.22□□□□□ -0.61
MSL3-202ENST00000337339 ATL3Q6DD88 541 aa11.22□□□□□ -0.61
MSL3-202ENST00000337339 INTS5Q6P9B9 1019 aaKnown RBP11.22□□□□□ -0.61
MSL3-202ENST00000337339 FAM177A1Q8N128 213 aaPredicted RBP11.22□□□□□ -0.61
MSL3-202ENST00000337339 MARCH10Q8NA82 808 aaPredicted RBP11.22□□□□□ -0.61
MSL3-202ENST00000337339 CDC5LQ99459 802 aaKnown RBP11.22□□□□□ -0.61
MSL3-202ENST00000337339 KCPQ6ZWJ8 1503 aa11.21□□□□□ -0.61
MSL3-202ENST00000337339 MAGEB6P1A0A0J9YX57 407 aa11.21□□□□□ -0.61
MSL3-202ENST00000337339 PLA2G4DQ86XP0 818 aa11.21□□□□□ -0.61
MSL3-202ENST00000337339 C8orf37Q96NL8 207 aa11.21□□□□□ -0.61
MSL3-202ENST00000337339 KRT23Q9C075 422 aa11.21□□□□□ -0.61
MSL3-202ENST00000337339 LY9Q9HBG7 655 aa11.21□□□□□ -0.61
MSL3-202ENST00000337339 CABP5Q9NP86 173 aa11.21□□□□□ -0.61
MSL3-202ENST00000337339 POLR3EQ9NVU0 708 aa11.21□□□□□ -0.61
MSL3-202ENST00000337339 ZNF652Q9Y2D9 606 aa11.21□□□□□ -0.61
MSL3-202ENST00000337339 N4BP2Q86UW6 1770 aaPredicted RBP11.21□□□□□ -0.61
MSL3-202ENST00000337339 YEATS4O95619 227 aa11.21□□□□□ -0.62
MSL3-202ENST00000337339 IGDCC4Q8TDY8 1250 aa11.21□□□□□ -0.62
MSL3-202ENST00000337339 NGLY1Q96IV0 654 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms