RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 CRKLP46109 303 aaKnown RBP17.25■□□□□ 0.35
UBA1-201ENST00000335972 ZRSR1Q15695 479 aaKnown RBP17.25■□□□□ 0.35
UBA1-201ENST00000335972 LPIN2Q92539 896 aa17.25■□□□□ 0.35
UBA1-201ENST00000335972 PDCL3Q9H2J4 239 aa17.25■□□□□ 0.35
UBA1-201ENST00000335972 KCNJ14Q9UNX9 436 aa17.25■□□□□ 0.35
UBA1-201ENST00000335972 hCG_1642624A0A1W2PR95 340 aa17.25■□□□□ 0.35
UBA1-201ENST00000335972 ZBTB43O43298 467 aa17.25■□□□□ 0.35
UBA1-201ENST00000335972 PFKFB1P16118 471 aa17.25■□□□□ 0.35
UBA1-201ENST00000335972 TDO2P48775 406 aa17.25■□□□□ 0.35
UBA1-201ENST00000335972 PAPPAQ13219 1627 aa17.25■□□□□ 0.35
UBA1-201ENST00000335972 KDM4FA0A1W2PPD8 638 aa17.24■□□□□ 0.35
UBA1-201ENST00000335972 MINDY4BA8MYZ0 360 aa17.24■□□□□ 0.35
UBA1-201ENST00000335972 ZNF202O95125 648 aa17.24■□□□□ 0.35
UBA1-201ENST00000335972 TTF1Q15361 905 aaPredicted RBP17.24■□□□□ 0.35
UBA1-201ENST00000335972 ZNF34Q8IZ26 560 aa17.24■□□□□ 0.35
UBA1-201ENST00000335972 NUP133Q8WUM0 1156 aa17.24■□□□□ 0.35
UBA1-201ENST00000335972 SDR42E1Q8WUS8 393 aa17.24■□□□□ 0.35
UBA1-201ENST00000335972 ANO10Q9NW15 660 aa17.24■□□□□ 0.35
UBA1-201ENST00000335972 KCNQ2O43526 872 aa17.24■□□□□ 0.35
UBA1-201ENST00000335972 ITPK1Q13572 414 aa17.24■□□□□ 0.35
UBA1-201ENST00000335972 CEP57L1Q8IYX8 460 aa17.24■□□□□ 0.35
UBA1-201ENST00000335972 ZNF710Q8N1W2 664 aa17.24■□□□□ 0.35
UBA1-201ENST00000335972 SLC4A4Q9Y6R1 1079 aa17.24■□□□□ 0.35
UBA1-201ENST00000335972 SLC5A1P13866 664 aa17.24■□□□□ 0.35
UBA1-201ENST00000335972 UBE3CQ15386 1083 aa17.24■□□□□ 0.35
UBA1-201ENST00000335972 INTS5Q6P9B9 1019 aaKnown RBP17.24■□□□□ 0.35
UBA1-201ENST00000335972 LRP2BPQ9P2M1 347 aa17.24■□□□□ 0.35
UBA1-201ENST00000335972 AKAP11Q9UKA4 1901 aa17.23■□□□□ 0.35
UBA1-201ENST00000335972 PLEKHG2Q9H7P9 1386 aa17.23■□□□□ 0.35
UBA1-201ENST00000335972 SMC2O95347 1197 aa17.23■□□□□ 0.35
UBA1-201ENST00000335972 NAA30Q147X3 362 aaPredicted RBP17.23■□□□□ 0.35
UBA1-201ENST00000335972 TPD52L1Q16890 204 aaPredicted RBP17.23■□□□□ 0.35
UBA1-201ENST00000335972 SLC4A8Q2Y0W8 1093 aa17.23■□□□□ 0.35
UBA1-201ENST00000335972 LY9Q9HBG7 655 aa17.23■□□□□ 0.35
UBA1-201ENST00000335972 CTAGE5O15320 804 aa17.23■□□□□ 0.35
UBA1-201ENST00000335972 GYG1P46976 350 aa17.23■□□□□ 0.35
UBA1-201ENST00000335972 IGDCC4Q8TDY8 1250 aa17.23■□□□□ 0.35
UBA1-201ENST00000335972 JAG2Q9Y219 1238 aa17.23■□□□□ 0.35
UBA1-201ENST00000335972 ZMYM6O95789 1325 aa17.23■□□□□ 0.35
UBA1-201ENST00000335972 CYP2D7A0A087X1C5 515 aa17.23■□□□□ 0.35
UBA1-201ENST00000335972 IL6STP40189 918 aaPredicted RBP17.23■□□□□ 0.35
UBA1-201ENST00000335972 IARSP41252 1262 aaKnown RBP17.23■□□□□ 0.35
UBA1-201ENST00000335972 C3orf67Q6ZVT6 689 aa17.23■□□□□ 0.35
UBA1-201ENST00000335972 UTP14AQ9BVJ6 771 aaKnown RBP17.23■□□□□ 0.35
UBA1-201ENST00000335972 FAM217BQ9NTX9 383 aaPredicted RBP17.23■□□□□ 0.35
UBA1-201ENST00000335972 SLIT2O94813 1529 aa17.22■□□□□ 0.35
UBA1-201ENST00000335972 SLC3A2P08195 630 aaKnown RBP17.22■□□□□ 0.35
UBA1-201ENST00000335972 FGFR2P21802 821 aa17.22■□□□□ 0.35
UBA1-201ENST00000335972 ARID4AP29374 1257 aaPredicted RBP17.22■□□□□ 0.35
UBA1-201ENST00000335972 MAP3K12Q12852 859 aa17.22■□□□□ 0.35
UBA1-201ENST00000335972 AXDND1Q5T1B0 1012 aaPredicted RBP17.22■□□□□ 0.35
UBA1-201ENST00000335972 KIAA1468Q9P260 1216 aa17.22■□□□□ 0.35
UBA1-201ENST00000335972 SLC12A7Q9Y666 1083 aa17.22■□□□□ 0.35
UBA1-201ENST00000335972 GSG1L2A8MUP6 293 aa17.22■□□□□ 0.35
UBA1-201ENST00000335972 ADGRA1Q86SQ6 560 aa17.22■□□□□ 0.35
UBA1-201ENST00000335972 KCNG4Q8TDN1 519 aa17.22■□□□□ 0.35
UBA1-201ENST00000335972 TPM3P06753 285 aa17.22■□□□□ 0.35
UBA1-201ENST00000335972 LMOD1P29536 600 aaPredicted RBP17.22■□□□□ 0.35
UBA1-201ENST00000335972 BCL2L12Q9HB09 334 aa17.22■□□□□ 0.35
UBA1-201ENST00000335972 CCDC87Q9NVE4 849 aa17.22■□□□□ 0.35
UBA1-201ENST00000335972 ITGB4P16144 1822 aa17.21■□□□□ 0.35
UBA1-201ENST00000335972 CCDC69A6NI79 296 aa17.21■□□□□ 0.35
UBA1-201ENST00000335972 PRDM1O75626 825 aa17.21■□□□□ 0.35
UBA1-201ENST00000335972 UQCRFS1P1P0C7P4 283 aa17.21■□□□□ 0.35
UBA1-201ENST00000335972 EIF5P55010 431 aaKnown RBP17.21■□□□□ 0.35
UBA1-201ENST00000335972 PNOCQ13519 176 aa17.21■□□□□ 0.35
UBA1-201ENST00000335972 POLR3EQ9NVU0 708 aa17.21■□□□□ 0.35
UBA1-201ENST00000335972 PATL2C9JE40 543 aaKnown RBP17.21■□□□□ 0.35
UBA1-201ENST00000335972 FOXN1O15353 648 aa17.21■□□□□ 0.35
UBA1-201ENST00000335972 TNNT1P13805 278 aa17.21■□□□□ 0.35
UBA1-201ENST00000335972 EVX2Q03828 476 aa17.21■□□□□ 0.35
UBA1-201ENST00000335972 CHAF1AQ13111 956 aaPredicted RBP17.21■□□□□ 0.35
UBA1-201ENST00000335972 DDB1Q16531 1140 aa17.21■□□□□ 0.35
UBA1-201ENST00000335972 IFNKQ9P0W0 207 aa17.21■□□□□ 0.35
UBA1-201ENST00000335972 BTBD18B2RXH4 712 aa17.2■□□□□ 0.34
UBA1-201ENST00000335972 GRIN1Q05586 938 aa17.2■□□□□ 0.34
UBA1-201ENST00000335972 PRIMPOLQ96LW4 560 aa17.2■□□□□ 0.34
UBA1-201ENST00000335972 LOC102724428A0A0B4J2F2 783 aa17.2■□□□□ 0.34
UBA1-201ENST00000335972 SKILP12757 684 aa17.2■□□□□ 0.34
UBA1-201ENST00000335972 SIK1P57059 783 aa17.2■□□□□ 0.34
UBA1-201ENST00000335972 CHRNDQ07001 517 aa17.2■□□□□ 0.34
UBA1-201ENST00000335972 LRRC8AQ8IWT6 810 aa17.2■□□□□ 0.34
UBA1-201ENST00000335972 RAI14Q9P0K7 980 aa17.2■□□□□ 0.34
UBA1-201ENST00000335972 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.2■□□□□ 0.34
UBA1-201ENST00000335972 ATP1A3P13637 1013 aa17.2■□□□□ 0.34
UBA1-201ENST00000335972 MFSD6Q6ZSS7 791 aa17.2■□□□□ 0.34
UBA1-201ENST00000335972 IGHMBP2P38935 993 aaKnown RBP17.19■□□□□ 0.34
UBA1-201ENST00000335972 SHC4Q6S5L8 630 aa17.19■□□□□ 0.34
UBA1-201ENST00000335972 BRAPQ7Z569 592 aa17.19■□□□□ 0.34
UBA1-201ENST00000335972 FBXL16Q8N461 479 aa17.19■□□□□ 0.34
UBA1-201ENST00000335972 MARCH10Q8NA82 808 aaPredicted RBP17.19■□□□□ 0.34
UBA1-201ENST00000335972 MROH5Q6ZUA9 1318 aa17.19■□□□□ 0.34
UBA1-201ENST00000335972 ABCA3Q99758 1704 aa17.19■□□□□ 0.34
UBA1-201ENST00000335972 YEATS4O95619 227 aa17.19■□□□□ 0.34
UBA1-201ENST00000335972 CYP7A1P22680 504 aa17.19■□□□□ 0.34
UBA1-201ENST00000335972 SYKP43405 635 aa17.19■□□□□ 0.34
UBA1-201ENST00000335972 GOLGA8FQ08AF8 430 aa17.19■□□□□ 0.34
UBA1-201ENST00000335972 GOLGA8DPQ0D2H9 430 aa17.19■□□□□ 0.34
UBA1-201ENST00000335972 TRIM29Q14134 588 aa17.19■□□□□ 0.34
UBA1-201ENST00000335972 NTRK3Q16288 839 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms