RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CCZ1P86791 482 aaPredicted RBP19.03■□□□□ 0.64
CDC42EP4-201ENST00000335793 SLC26A6Q9BXS9 759 aa19.03■□□□□ 0.64
CDC42EP4-201ENST00000335793 ANGEL1Q9UNK9 670 aaKnown RBP19.03■□□□□ 0.64
CDC42EP4-201ENST00000335793 ATP1A3P13637 1013 aa19.02■□□□□ 0.64
CDC42EP4-201ENST00000335793 ITGA6P23229 1130 aa19.02■□□□□ 0.64
CDC42EP4-201ENST00000335793 TMEM67Q5HYA8 995 aa19.02■□□□□ 0.64
CDC42EP4-201ENST00000335793 CNNM3Q8NE01 707 aa19.02■□□□□ 0.64
CDC42EP4-201ENST00000335793 NOL10Q9BSC4 688 aaKnown RBP19.02■□□□□ 0.64
CDC42EP4-201ENST00000335793 POLR3EQ9NVU0 708 aa19.02■□□□□ 0.64
CDC42EP4-201ENST00000335793 TRMT112Q9UI30 125 aaKnown RBP19.02■□□□□ 0.64
CDC42EP4-201ENST00000335793 GOLGA8AA7E2F4 631 aa19.02■□□□□ 0.64
CDC42EP4-201ENST00000335793 CDKL5O76039 1030 aa19.02■□□□□ 0.64
CDC42EP4-201ENST00000335793 NLRP12P59046 1061 aa19.02■□□□□ 0.64
CDC42EP4-201ENST00000335793 KIF23Q02241 960 aaPredicted RBP19.02■□□□□ 0.64
CDC42EP4-201ENST00000335793 KRT40Q6A162 431 aa19.02■□□□□ 0.64
CDC42EP4-201ENST00000335793 LMTK3Q96Q04 1460 aa19.02■□□□□ 0.63
CDC42EP4-201ENST00000335793 ZBTB43O43298 467 aa19.01■□□□□ 0.63
CDC42EP4-201ENST00000335793 FANCCQ00597 558 aa19.01■□□□□ 0.63
CDC42EP4-201ENST00000335793 PNOCQ13519 176 aa19.01■□□□□ 0.63
CDC42EP4-201ENST00000335793 SALL1Q9NSC2 1324 aa19.01■□□□□ 0.63
CDC42EP4-201ENST00000335793 IFIT3O14879 490 aaKnown RBP19.01■□□□□ 0.63
CDC42EP4-201ENST00000335793 SLU7O95391 586 aaKnown RBP19.01■□□□□ 0.63
CDC42EP4-201ENST00000335793 ANTXR2P58335 489 aa19.01■□□□□ 0.63
CDC42EP4-201ENST00000335793 KMT5BQ4FZB7 885 aa19.01■□□□□ 0.63
CDC42EP4-201ENST00000335793 MB21D2Q8IYB1 491 aaPredicted RBP19.01■□□□□ 0.63
CDC42EP4-201ENST00000335793 HPS5Q9UPZ3 1129 aa19.01■□□□□ 0.63
CDC42EP4-201ENST00000335793 ANKRD18BA2A2Z9 1011 aa19.01■□□□□ 0.63
CDC42EP4-201ENST00000335793 RBM6P78332 1123 aaKnown RBP19.01■□□□□ 0.63
CDC42EP4-201ENST00000335793 WDHD1O75717 1129 aaPredicted RBP19■□□□□ 0.63
CDC42EP4-201ENST00000335793 GOLGA8FQ08AF8 430 aa19■□□□□ 0.63
CDC42EP4-201ENST00000335793 GOLGA8DPQ0D2H9 430 aa19■□□□□ 0.63
CDC42EP4-201ENST00000335793 CADPS2Q86UW7 1296 aa19■□□□□ 0.63
CDC42EP4-201ENST00000335793 NUP133Q8WUM0 1156 aa19■□□□□ 0.63
CDC42EP4-201ENST00000335793 ZKSCAN3Q9BRR0 538 aa19■□□□□ 0.63
CDC42EP4-201ENST00000335793 GREM2Q9H772 168 aa19■□□□□ 0.63
CDC42EP4-201ENST00000335793 DNAI1Q9UI46 699 aa19■□□□□ 0.63
CDC42EP4-201ENST00000335793 MORC2Q9Y6X9 1032 aaPredicted RBP19■□□□□ 0.63
CDC42EP4-201ENST00000335793 TMEM94Q12767 1356 aa19■□□□□ 0.63
CDC42EP4-201ENST00000335793 IL2RBP14784 551 aa19■□□□□ 0.63
CDC42EP4-201ENST00000335793 MCAMP43121 646 aa19■□□□□ 0.63
CDC42EP4-201ENST00000335793 SAFBQ15424 915 aaKnown RBP eCLIP19■□□□□ 0.63
CDC42EP4-201ENST00000335793 CCDC150Q8NCX0 1101 aa19■□□□□ 0.63
CDC42EP4-201ENST00000335793 NAPBQ9H115 298 aa19■□□□□ 0.63
CDC42EP4-201ENST00000335793 CMA1P23946 247 aa18.99■□□□□ 0.63
CDC42EP4-201ENST00000335793 SLC12A7Q9Y666 1083 aa18.99■□□□□ 0.63
CDC42EP4-201ENST00000335793 ERVV-2B6SEH9 535 aa18.99■□□□□ 0.63
CDC42EP4-201ENST00000335793 STARD3NLO95772 234 aa18.99■□□□□ 0.63
CDC42EP4-201ENST00000335793 ASAP1Q9ULH1 1129 aa18.99■□□□□ 0.63
CDC42EP4-201ENST00000335793 ZNF532Q9HCE3 1301 aa18.99■□□□□ 0.63
CDC42EP4-201ENST00000335793 SENP2Q9HC62 589 aa18.99■□□□□ 0.63
CDC42EP4-201ENST00000335793 ATG3Q9NT62 314 aa18.99■□□□□ 0.63
CDC42EP4-201ENST00000335793 TOP1P11387 765 aaKnown RBP18.98■□□□□ 0.63
CDC42EP4-201ENST00000335793 CCDC102BQ68D86 513 aa18.98■□□□□ 0.63
CDC42EP4-201ENST00000335793 URI1O94763 535 aaPredicted RBP18.98■□□□□ 0.63
CDC42EP4-201ENST00000335793 SLC39A14Q15043 492 aa18.98■□□□□ 0.63
CDC42EP4-201ENST00000335793 CYB5R4Q7L1T6 521 aa18.98■□□□□ 0.63
CDC42EP4-201ENST00000335793 NBPF11Q86T75 865 aa18.98■□□□□ 0.63
CDC42EP4-201ENST00000335793 MNS1Q8NEH6 495 aa18.98■□□□□ 0.63
CDC42EP4-201ENST00000335793 UTP14AQ9BVJ6 771 aaKnown RBP18.98■□□□□ 0.63
CDC42EP4-201ENST00000335793 IMPACTQ9P2X3 320 aa18.98■□□□□ 0.63
CDC42EP4-201ENST00000335793 KIF2AO00139 706 aaPredicted RBP18.98■□□□□ 0.63
CDC42EP4-201ENST00000335793 SNAP23O00161 211 aa18.98■□□□□ 0.63
CDC42EP4-201ENST00000335793 CTDSPL2Q05D32 466 aa18.98■□□□□ 0.63
CDC42EP4-201ENST00000335793 ERCC6LQ2NKX8 1250 aa18.98■□□□□ 0.63
CDC42EP4-201ENST00000335793 ARMCX5Q6P1M9 558 aa18.98■□□□□ 0.63
CDC42EP4-201ENST00000335793 TBC1D10CQ8IV04 446 aa18.98■□□□□ 0.63
CDC42EP4-201ENST00000335793 CMTR1Q8N1G2 835 aaKnown RBP18.98■□□□□ 0.63
CDC42EP4-201ENST00000335793 PIP4K2BP78356 416 aa18.97■□□□□ 0.63
CDC42EP4-201ENST00000335793 CREBRFQ8IUR6 639 aa18.97■□□□□ 0.63
CDC42EP4-201ENST00000335793 ERO1AQ96HE7 468 aa18.97■□□□□ 0.63
CDC42EP4-201ENST00000335793 DRC1Q96MC2 740 aa18.97■□□□□ 0.63
CDC42EP4-201ENST00000335793 RASSF4Q9H2L5 321 aa18.97■□□□□ 0.63
CDC42EP4-201ENST00000335793 UBE2Q2LH0YL09 131 aa18.97■□□□□ 0.63
CDC42EP4-201ENST00000335793 IRS4O14654 1257 aaPredicted RBP18.97■□□□□ 0.63
CDC42EP4-201ENST00000335793 TDO2P48775 406 aa18.97■□□□□ 0.63
CDC42EP4-201ENST00000335793 SART3Q15020 963 aaKnown RBP18.97■□□□□ 0.63
CDC42EP4-201ENST00000335793 ZNF397Q8NF99 534 aaPredicted RBP18.97■□□□□ 0.63
CDC42EP4-201ENST00000335793 CDC27P30260 824 aa18.96■□□□□ 0.63
CDC42EP4-201ENST00000335793 PHKA1P46020 1223 aa18.96■□□□□ 0.63
CDC42EP4-201ENST00000335793 SSRP1Q08945 709 aaKnown RBP18.96■□□□□ 0.63
CDC42EP4-201ENST00000335793 APOA5Q6Q788 366 aa18.96■□□□□ 0.63
CDC42EP4-201ENST00000335793 PPP1R13BQ96KQ4 1090 aa18.96■□□□□ 0.63
CDC42EP4-201ENST00000335793 CHD2O14647 1828 aaKnown RBP18.96■□□□□ 0.63
CDC42EP4-201ENST00000335793 SLIT3O75094 1523 aa18.96■□□□□ 0.63
CDC42EP4-201ENST00000335793 MYL5Q02045 173 aa18.96■□□□□ 0.63
CDC42EP4-201ENST00000335793 HLFQ16534 295 aa18.96■□□□□ 0.63
CDC42EP4-201ENST00000335793 E4F1Q66K89 784 aaPredicted RBP18.96■□□□□ 0.63
CDC42EP4-201ENST00000335793 NYAP1Q6ZVC0 841 aa18.96■□□□□ 0.63
CDC42EP4-201ENST00000335793 ZBTB38Q8NAP3 1195 aaPredicted RBP18.96■□□□□ 0.63
CDC42EP4-201ENST00000335793 FOXP2O15409 715 aa18.96■□□□□ 0.63
CDC42EP4-201ENST00000335793 TTF1Q15361 905 aaPredicted RBP18.96■□□□□ 0.63
CDC42EP4-201ENST00000335793 KRBA2Q6ZNG9 492 aa18.96■□□□□ 0.63
CDC42EP4-201ENST00000335793 ISCA1Q9BUE6 129 aa18.96■□□□□ 0.63
CDC42EP4-201ENST00000335793 PIH1D3Q9NQM4 214 aaKnown RBP18.96■□□□□ 0.63
CDC42EP4-201ENST00000335793 LCMT1Q9UIC8 334 aa18.96■□□□□ 0.63
CDC42EP4-201ENST00000335793 WWC3Q9ULE0 1092 aa18.96■□□□□ 0.63
CDC42EP4-201ENST00000335793 KCNJ14Q9UNX9 436 aa18.96■□□□□ 0.63
CDC42EP4-201ENST00000335793 ERICH2A1L162 156 aa18.95■□□□□ 0.62
CDC42EP4-201ENST00000335793 CBFA2T2O43439 604 aa18.95■□□□□ 0.62
CDC42EP4-201ENST00000335793 PCCAP05165 728 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms