RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 ARMC9Q7Z3E5 817 aa18.34■□□□□ 0.53
KATNA1-201ENST00000335643 ZGPATQ8N5A5 531 aaKnown RBP18.34■□□□□ 0.53
KATNA1-201ENST00000335643 RHPN1Q8TCX5 695 aa18.34■□□□□ 0.53
KATNA1-201ENST00000335643 UQCRFS1P1P0C7P4 283 aa18.34■□□□□ 0.53
KATNA1-201ENST00000335643 RRP1P56182 461 aaKnown RBP18.34■□□□□ 0.53
KATNA1-201ENST00000335643 SUPT20HL1Q3ZLR7 823 aa18.34■□□□□ 0.53
KATNA1-201ENST00000335643 TTC39AQ5SRH9 613 aa18.34■□□□□ 0.53
KATNA1-201ENST00000335643 DZIP1Q86YF9 867 aaKnown RBP18.34■□□□□ 0.53
KATNA1-201ENST00000335643 CSRNP1Q96S65 589 aa18.34■□□□□ 0.53
KATNA1-201ENST00000335643 MAST2Q6P0Q8 1798 aa18.33■□□□□ 0.53
KATNA1-201ENST00000335643 CTCFP49711 727 aaPredicted RBP18.33■□□□□ 0.52
KATNA1-201ENST00000335643 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.33■□□□□ 0.52
KATNA1-201ENST00000335643 FAM198AQ9UFP1 575 aa18.33■□□□□ 0.52
KATNA1-201ENST00000335643 NDUFB9Q9Y6M9 179 aa18.33■□□□□ 0.52
KATNA1-201ENST00000335643 RFX7Q2KHR2 1363 aa18.32■□□□□ 0.52
KATNA1-201ENST00000335643 LAMB1P07942 1786 aa18.32■□□□□ 0.52
KATNA1-201ENST00000335643 PPP1R12BO60237 982 aaPredicted RBP18.32■□□□□ 0.52
KATNA1-201ENST00000335643 CYP2E1P05181 493 aaPredicted RBP18.32■□□□□ 0.52
KATNA1-201ENST00000335643 TNNI2P48788 182 aa18.32■□□□□ 0.52
KATNA1-201ENST00000335643 CCDC158Q5M9N0 1113 aa18.32■□□□□ 0.52
KATNA1-201ENST00000335643 FKBP1CQ5VVH2 108 aa18.32■□□□□ 0.52
KATNA1-201ENST00000335643 ERICH6Q7L0X2 663 aa18.32■□□□□ 0.52
KATNA1-201ENST00000335643 FAM83AQ86UY5 434 aa18.32■□□□□ 0.52
KATNA1-201ENST00000335643 AACSQ86V21 672 aa18.32■□□□□ 0.52
KATNA1-201ENST00000335643 ERC1Q8IUD2 1116 aa18.32■□□□□ 0.52
KATNA1-201ENST00000335643 ZFPM1Q8IX07 1006 aa18.32■□□□□ 0.52
KATNA1-201ENST00000335643 NSUN4Q96CB9 384 aaKnown RBP18.32■□□□□ 0.52
KATNA1-201ENST00000335643 USP40Q9NVE5 1235 aa18.32■□□□□ 0.52
KATNA1-201ENST00000335643 MROH7-TTC4A0A0A0MT08 1334 aa18.31■□□□□ 0.52
KATNA1-201ENST00000335643 ZAP70P43403 619 aa18.31■□□□□ 0.52
KATNA1-201ENST00000335643 TCP10Q12799 353 aa18.31■□□□□ 0.52
KATNA1-201ENST00000335643 FAM163AQ96GL9 167 aaPredicted RBP18.31■□□□□ 0.52
KATNA1-201ENST00000335643 ZNF512BQ96KM6 892 aaPredicted RBP18.31■□□□□ 0.52
KATNA1-201ENST00000335643 TMOD2Q9NZR1 351 aa18.31■□□□□ 0.52
KATNA1-201ENST00000335643 HMMRO75330 724 aa18.3■□□□□ 0.52
KATNA1-201ENST00000335643 BTDP43251 543 aa18.3■□□□□ 0.52
KATNA1-201ENST00000335643 SPTY2D1Q68D10 685 aaPredicted RBP18.3■□□□□ 0.52
KATNA1-201ENST00000335643 CHMP4BQ9H444 224 aaKnown RBP18.3■□□□□ 0.52
KATNA1-201ENST00000335643 DOCK2Q92608 1830 aa18.3■□□□□ 0.52
KATNA1-201ENST00000335643 RPAP1Q9BWH6 1393 aaPredicted RBP18.3■□□□□ 0.52
KATNA1-201ENST00000335643 BEGAINQ9BUH8 593 aa18.3■□□□□ 0.52
KATNA1-201ENST00000335643 DDX4Q9NQI0 724 aaKnown RBP18.3■□□□□ 0.52
KATNA1-201ENST00000335643 PIH1D3Q9NQM4 214 aaKnown RBP18.3■□□□□ 0.52
KATNA1-201ENST00000335643 RAI14Q9P0K7 980 aa18.3■□□□□ 0.52
KATNA1-201ENST00000335643 AK9Q5TCS8 1911 aa18.29■□□□□ 0.52
KATNA1-201ENST00000335643 GJA5P36382 358 aa18.29■□□□□ 0.52
KATNA1-201ENST00000335643 IREB2P48200 963 aaKnown RBP18.29■□□□□ 0.52
KATNA1-201ENST00000335643 RHBDL3P58872 404 aa18.29■□□□□ 0.52
KATNA1-201ENST00000335643 HSP90AB4PQ58FF6 505 aa18.29■□□□□ 0.52
KATNA1-201ENST00000335643 SPRYD7Q5W111 196 aa18.29■□□□□ 0.52
KATNA1-201ENST00000335643 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.29■□□□□ 0.52
KATNA1-201ENST00000335643 ADGRA1Q86SQ6 560 aa18.29■□□□□ 0.52
KATNA1-201ENST00000335643 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.29■□□□□ 0.52
KATNA1-201ENST00000335643 FAM151AQ8WW52 585 aa18.29■□□□□ 0.52
KATNA1-201ENST00000335643 KIF1BPQ96EK5 621 aa18.29■□□□□ 0.52
KATNA1-201ENST00000335643 BCL11AQ9H165 835 aa18.29■□□□□ 0.52
KATNA1-201ENST00000335643 CDK5RAP2Q96SN8 1893 aa18.28■□□□□ 0.52
KATNA1-201ENST00000335643 GPR75-ASB3A0A0A6YYF3 556 aa18.28■□□□□ 0.52
KATNA1-201ENST00000335643 WDHD1O75717 1129 aaPredicted RBP18.28■□□□□ 0.52
KATNA1-201ENST00000335643 SLURP2P0DP57 97 aa18.28■□□□□ 0.52
KATNA1-201ENST00000335643 CNKSR2Q8WXI2 1034 aa18.28■□□□□ 0.52
KATNA1-201ENST00000335643 ANTXR1Q9H6X2 564 aa18.28■□□□□ 0.52
KATNA1-201ENST00000335643 PRDM10Q9NQV6 1147 aa18.28■□□□□ 0.52
KATNA1-201ENST00000335643 RNF186Q9NXI6 227 aa18.28■□□□□ 0.52
KATNA1-201ENST00000335643 LRP2BPQ9P2M1 347 aa18.28■□□□□ 0.52
KATNA1-201ENST00000335643 RGS3P49796 1198 aa18.27■□□□□ 0.52
KATNA1-201ENST00000335643 MIGA2Q7L4E1 593 aa18.27■□□□□ 0.52
KATNA1-201ENST00000335643 SH3BP5LQ7L8J4 393 aa18.27■□□□□ 0.52
KATNA1-201ENST00000335643 ANKRD13AQ8IZ07 590 aa18.27■□□□□ 0.52
KATNA1-201ENST00000335643 SLC10A4Q96EP9 437 aa18.27■□□□□ 0.52
KATNA1-201ENST00000335643 WNK4Q96J92 1243 aa18.27■□□□□ 0.52
KATNA1-201ENST00000335643 IDI2Q9BXS1 227 aa18.27■□□□□ 0.52
KATNA1-201ENST00000335643 ELP3Q9H9T3 547 aa18.27■□□□□ 0.52
KATNA1-201ENST00000335643 PCDHB15Q9Y5E8 787 aa18.27■□□□□ 0.52
KATNA1-201ENST00000335643 CASP8AP2Q9UKL3 1982 aa18.27■□□□□ 0.51
KATNA1-201ENST00000335643 TRPA1O75762 1119 aa18.26■□□□□ 0.51
KATNA1-201ENST00000335643 VGLL4Q14135 290 aa18.26■□□□□ 0.51
KATNA1-201ENST00000335643 CRBNQ96SW2 442 aa18.26■□□□□ 0.51
KATNA1-201ENST00000335643 ATRNL1Q5VV63 1379 aa18.26■□□□□ 0.51
KATNA1-201ENST00000335643 SMARCA5O60264 1052 aaPredicted RBP18.25■□□□□ 0.51
KATNA1-201ENST00000335643 RAB11FIP3O75154 756 aa18.25■□□□□ 0.51
KATNA1-201ENST00000335643 SLF2Q8IX21 1173 aa18.25■□□□□ 0.51
KATNA1-201ENST00000335643 CLASRPQ8N2M8 674 aaKnown RBP18.25■□□□□ 0.51
KATNA1-201ENST00000335643 FOCADQ5VW36 1801 aa18.25■□□□□ 0.51
KATNA1-201ENST00000335643 UNCXA6NJT0 531 aa18.25■□□□□ 0.51
KATNA1-201ENST00000335643 CA12O43570 354 aa18.25■□□□□ 0.51
KATNA1-201ENST00000335643 PICALMQ13492 652 aa18.25■□□□□ 0.51
KATNA1-201ENST00000335643 ZKSCAN4Q969J2 545 aaPredicted RBP18.25■□□□□ 0.51
KATNA1-201ENST00000335643 DDTLA6NHG4 134 aaPredicted RBP18.24■□□□□ 0.51
KATNA1-201ENST00000335643 TM4SF4P48230 202 aa18.24■□□□□ 0.51
KATNA1-201ENST00000335643 MAP3K9P80192 1104 aa18.24■□□□□ 0.51
KATNA1-201ENST00000335643 NAA16Q6N069 864 aaPredicted RBP18.24■□□□□ 0.51
KATNA1-201ENST00000335643 WRNIP1Q96S55 665 aa18.24■□□□□ 0.51
KATNA1-201ENST00000335643 SNCAIPQ9Y6H5 919 aa18.24■□□□□ 0.51
KATNA1-201ENST00000335643 ENTPD3O75355 529 aa18.23■□□□□ 0.51
KATNA1-201ENST00000335643 ZBTB48P10074 688 aaPredicted RBP18.23■□□□□ 0.51
KATNA1-201ENST00000335643 INPP5BP32019 993 aa18.23■□□□□ 0.51
KATNA1-201ENST00000335643 GSTO1P78417 241 aa18.23■□□□□ 0.51
KATNA1-201ENST00000335643 SH3RF3Q8TEJ3 882 aaPredicted RBP18.23■□□□□ 0.51
KATNA1-201ENST00000335643 OPTNQ96CV9 577 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms