RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 IGSF3O75054 1194 aa15.06■□□□□ 0
CMTM1-203ENST00000333001 HMMRO75330 724 aa15.06■□□□□ 0
CMTM1-203ENST00000333001 USP2O75604 605 aaPredicted RBP15.06■□□□□ 0
CMTM1-203ENST00000333001 ZBTB48P10074 688 aaPredicted RBP15.06■□□□□ 0
CMTM1-203ENST00000333001 ARID4AP29374 1257 aaPredicted RBP15.06■□□□□ 0
CMTM1-203ENST00000333001 TM4SF4P48230 202 aa15.06■□□□□ 0
CMTM1-203ENST00000333001 TNNI3KQ59H18 835 aa15.06■□□□□ 0
CMTM1-203ENST00000333001 ERICH6Q7L0X2 663 aa15.06■□□□□ 0
CMTM1-203ENST00000333001 SPATA5Q8NB90 893 aa15.06■□□□□ 0
CMTM1-203ENST00000333001 FAM163AQ96GL9 167 aaPredicted RBP15.06■□□□□ 0
CMTM1-203ENST00000333001 TEPSINQ96N21 525 aa15.06■□□□□ 0
CMTM1-203ENST00000333001 TMEM39BQ9GZU3 492 aa15.06■□□□□ 0
CMTM1-203ENST00000333001 RNF186Q9NXI6 227 aa15.06■□□□□ 0
CMTM1-203ENST00000333001 FPGT-TNNI3KV9GXZ4 949 aa15.06■□□□□ 0
CMTM1-203ENST00000333001 MANSC4A6NHS7 340 aaPredicted RBP15.05■□□□□ -0
CMTM1-203ENST00000333001 TRPA1O75762 1119 aa15.05■□□□□ -0
CMTM1-203ENST00000333001 LDHCP07864 332 aa15.05■□□□□ -0
CMTM1-203ENST00000333001 GSTO1P78417 241 aa15.05■□□□□ -0
CMTM1-203ENST00000333001 DIXDC1Q155Q3 683 aa15.05■□□□□ -0
CMTM1-203ENST00000333001 SPRYD7Q5W111 196 aa15.05■□□□□ -0
CMTM1-203ENST00000333001 DCAF15Q66K64 600 aa15.05■□□□□ -0
CMTM1-203ENST00000333001 FAM151AQ8WW52 585 aa15.05■□□□□ -0
CMTM1-203ENST00000333001 COG6Q9Y2V7 657 aa15.05■□□□□ -0
CMTM1-203ENST00000333001 MYH2Q9UKX2 1941 aa15.04■□□□□ -0
CMTM1-203ENST00000333001 RPAP1Q9BWH6 1393 aaPredicted RBP15.04■□□□□ -0
CMTM1-203ENST00000333001 MAP4K4O95819 1239 aaPredicted RBP15.04■□□□□ -0
CMTM1-203ENST00000333001 MAP3K9P80192 1104 aa15.04■□□□□ -0
CMTM1-203ENST00000333001 TTC39AQ5SRH9 613 aa15.04■□□□□ -0
CMTM1-203ENST00000333001 CDC42EP5Q6NZY7 148 aa15.04■□□□□ -0
CMTM1-203ENST00000333001 ZNF512BQ96KM6 892 aaPredicted RBP15.04■□□□□ -0
CMTM1-203ENST00000333001 ZBTB40Q9NUA8 1239 aa15.04■□□□□ -0
CMTM1-203ENST00000333001 USP40Q9NVE5 1235 aa15.04■□□□□ -0
CMTM1-203ENST00000333001 HMG20BQ9P0W2 317 aa15.04■□□□□ -0
CMTM1-203ENST00000333001 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.04■□□□□ -0
CMTM1-203ENST00000333001 SSC5DA1L4H1 1573 aa15.03■□□□□ -0
CMTM1-203ENST00000333001 GAKO14976 1311 aa15.03■□□□□ -0
CMTM1-203ENST00000333001 ALDH1A1P00352 501 aa15.03■□□□□ -0
CMTM1-203ENST00000333001 CACNB3P54284 484 aa15.03■□□□□ -0
CMTM1-203ENST00000333001 CSADQ9Y600 493 aa15.03■□□□□ -0
CMTM1-203ENST00000333001 AK9Q5TCS8 1911 aa15.02■□□□□ -0
CMTM1-203ENST00000333001 OTUD7BQ6GQQ9 843 aa15.02■□□□□ -0
CMTM1-203ENST00000333001 WNK4Q96J92 1243 aa15.02■□□□□ -0
CMTM1-203ENST00000333001 LRP2BPQ9P2M1 347 aa15.02■□□□□ -0
CMTM1-203ENST00000333001 FZD1Q9UP38 647 aa15.02■□□□□ -0
CMTM1-203ENST00000333001 ENTPD3O75355 529 aa15.01□□□□□ -0.01
CMTM1-203ENST00000333001 MCAMP43121 646 aa15.01□□□□□ -0.01
CMTM1-203ENST00000333001 MECOMQ03112 1051 aa15.01□□□□□ -0.01
CMTM1-203ENST00000333001 MKRN3Q13064 507 aaKnown RBP15.01□□□□□ -0.01
CMTM1-203ENST00000333001 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.01□□□□□ -0.01
CMTM1-203ENST00000333001 CLMNQ96JQ2 1002 aa15.01□□□□□ -0.01
CMTM1-203ENST00000333001 DBNDD2Q9BQY9 259 aa15.01□□□□□ -0.01
CMTM1-203ENST00000333001 IDI2Q9BXS1 227 aa15.01□□□□□ -0.01
CMTM1-203ENST00000333001 RAI14Q9P0K7 980 aa15.01□□□□□ -0.01
CMTM1-203ENST00000333001 MROH7-TTC4A0A0A0MT08 1334 aa15□□□□□ -0.01
CMTM1-203ENST00000333001 GPR75-ASB3A0A0A6YYF3 556 aa15□□□□□ -0.01
CMTM1-203ENST00000333001 RAB11FIP3O75154 756 aa15□□□□□ -0.01
CMTM1-203ENST00000333001 NOM1Q5C9Z4 860 aaKnown RBP15□□□□□ -0.01
CMTM1-203ENST00000333001 PPP1R3FQ6ZSY5 799 aaPredicted RBP15□□□□□ -0.01
CMTM1-203ENST00000333001 NSUN4Q96CB9 384 aaKnown RBP15□□□□□ -0.01
CMTM1-203ENST00000333001 NOL10Q9BSC4 688 aaKnown RBP15□□□□□ -0.01
CMTM1-203ENST00000333001 CFHR5Q9BXR6 569 aa15□□□□□ -0.01
CMTM1-203ENST00000333001 ZNF341Q9BYN7 854 aa15□□□□□ -0.01
CMTM1-203ENST00000333001 EXOC6BQ9Y2D4 811 aa15□□□□□ -0.01
CMTM1-203ENST00000333001 NPM3O75607 178 aaKnown RBP14.99□□□□□ -0.01
CMTM1-203ENST00000333001 BTDP43251 543 aa14.99□□□□□ -0.01
CMTM1-203ENST00000333001 TCP10Q12799 353 aa14.99□□□□□ -0.01
CMTM1-203ENST00000333001 VGLL4Q14135 290 aa14.99□□□□□ -0.01
CMTM1-203ENST00000333001 TMED8Q6PL24 325 aaPredicted RBP14.99□□□□□ -0.01
CMTM1-203ENST00000333001 CDAN1Q8IWY9 1227 aa14.99□□□□□ -0.01
CMTM1-203ENST00000333001 CLASRPQ8N2M8 674 aaKnown RBP14.99□□□□□ -0.01
CMTM1-203ENST00000333001 RHPN1Q8TCX5 695 aa14.99□□□□□ -0.01
CMTM1-203ENST00000333001 EAF2Q96CJ1 260 aaPredicted RBP14.99□□□□□ -0.01
CMTM1-203ENST00000333001 OPTNQ96CV9 577 aa14.99□□□□□ -0.01
CMTM1-203ENST00000333001 KIF1BPQ96EK5 621 aa14.99□□□□□ -0.01
CMTM1-203ENST00000333001 ELP3Q9H9T3 547 aa14.99□□□□□ -0.01
CMTM1-203ENST00000333001 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.99□□□□□ -0.01
CMTM1-203ENST00000333001 FAM198AQ9UFP1 575 aa14.99□□□□□ -0.01
CMTM1-203ENST00000333001 BAG3O95817 575 aa14.98□□□□□ -0.01
CMTM1-203ENST00000333001 PLCG2P16885 1265 aa14.98□□□□□ -0.01
CMTM1-203ENST00000333001 NFIAQ12857 509 aa14.98□□□□□ -0.01
CMTM1-203ENST00000333001 PI16Q6UXB8 463 aa14.98□□□□□ -0.01
CMTM1-203ENST00000333001 TBC1D9Q6ZT07 1266 aa14.98□□□□□ -0.01
CMTM1-203ENST00000333001 AACSQ86V21 672 aa14.98□□□□□ -0.01
CMTM1-203ENST00000333001 ERO1BQ86YB8 467 aa14.98□□□□□ -0.01
CMTM1-203ENST00000333001 IFNL1Q8IU54 200 aa14.98□□□□□ -0.01
CMTM1-203ENST00000333001 WRNIP1Q96S55 665 aa14.98□□□□□ -0.01
CMTM1-203ENST00000333001 CCDC8Q9H0W5 538 aaPredicted RBP14.98□□□□□ -0.01
CMTM1-203ENST00000333001 DBNLQ9UJU6 430 aaKnown RBP14.98□□□□□ -0.01
CMTM1-203ENST00000333001 TNRC18O15417 2968 aaPredicted RBP14.98□□□□□ -0.01
CMTM1-203ENST00000333001 TESPA1A2RU30 521 aaPredicted RBP14.97□□□□□ -0.01
CMTM1-203ENST00000333001 RGS3P49796 1198 aa14.97□□□□□ -0.01
CMTM1-203ENST00000333001 GTF2A2P52657 109 aa14.97□□□□□ -0.01
CMTM1-203ENST00000333001 NAA16Q6N069 864 aaPredicted RBP14.97□□□□□ -0.01
CMTM1-203ENST00000333001 POTEDQ86YR6 584 aa14.97□□□□□ -0.01
CMTM1-203ENST00000333001 ZSCAN29Q8IWY8 852 aaPredicted RBP14.97□□□□□ -0.01
CMTM1-203ENST00000333001 SNRKQ9NRH2 765 aa14.97□□□□□ -0.01
CMTM1-203ENST00000333001 PCDH10Q9P2E7 1040 aa14.97□□□□□ -0.01
CMTM1-203ENST00000333001 PDE4DIPQ5VU43 2346 aa14.97□□□□□ -0.01
CMTM1-203ENST00000333001 SPDYE5A6NIY4 337 aa14.96□□□□□ -0.01
CMTM1-203ENST00000333001 TBC1D8O95759 1140 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms