RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 SURF6O75683 361 aaKnown RBP11.88□□□□□ -0.51
SYN3-201ENST00000332840 TNNI2P48788 182 aa11.88□□□□□ -0.51
SYN3-201ENST00000332840 SPTY2D1Q68D10 685 aaPredicted RBP11.88□□□□□ -0.51
SYN3-201ENST00000332840 HHIPL2Q6UWX4 724 aa11.88□□□□□ -0.51
SYN3-201ENST00000332840 ARMC9Q7Z3E5 817 aa11.88□□□□□ -0.51
SYN3-201ENST00000332840 ERC1Q8IUD2 1116 aa11.88□□□□□ -0.51
SYN3-201ENST00000332840 SLF2Q8IX21 1173 aa11.88□□□□□ -0.51
SYN3-201ENST00000332840 PRMT6Q96LA8 375 aaPredicted RBP11.88□□□□□ -0.51
SYN3-201ENST00000332840 ZDHHC15Q96MV8 337 aa11.88□□□□□ -0.51
SYN3-201ENST00000332840 VEZTQ9HBM0 779 aa11.88□□□□□ -0.51
SYN3-201ENST00000332840 NOP58Q9Y2X3 529 aaKnown RBP11.88□□□□□ -0.51
SYN3-201ENST00000332840 UNCXA6NJT0 531 aa11.87□□□□□ -0.51
SYN3-201ENST00000332840 PPP1R12BO60237 982 aaPredicted RBP11.87□□□□□ -0.51
SYN3-201ENST00000332840 RAB11FIP3O75154 756 aa11.87□□□□□ -0.51
SYN3-201ENST00000332840 LDHBP07195 334 aaKnown RBP11.87□□□□□ -0.51
SYN3-201ENST00000332840 UQCRFS1P1P0C7P4 283 aa11.87□□□□□ -0.51
SYN3-201ENST00000332840 PHKA1P46020 1223 aa11.87□□□□□ -0.51
SYN3-201ENST00000332840 ZNF157P51786 506 aaPredicted RBP11.87□□□□□ -0.51
SYN3-201ENST00000332840 TTLL12Q14166 644 aaPredicted RBP11.87□□□□□ -0.51
SYN3-201ENST00000332840 FKBP1CQ5VVH2 108 aa11.87□□□□□ -0.51
SYN3-201ENST00000332840 HOOK2Q96ED9 719 aa11.87□□□□□ -0.51
SYN3-201ENST00000332840 XAGE2Q96GT9 111 aa11.87□□□□□ -0.51
SYN3-201ENST00000332840 NEUROD6Q96NK8 337 aa11.87□□□□□ -0.51
SYN3-201ENST00000332840 ZNF70Q9UC06 446 aaPredicted RBP11.87□□□□□ -0.51
SYN3-201ENST00000332840 CLRN2A0PK11 232 aa11.86□□□□□ -0.51
SYN3-201ENST00000332840 IGSF3O75054 1194 aa11.86□□□□□ -0.51
SYN3-201ENST00000332840 TIMM10P62072 90 aa11.86□□□□□ -0.51
SYN3-201ENST00000332840 SLC10A3P09131 477 aa11.85□□□□□ -0.51
SYN3-201ENST00000332840 ADORA1P30542 326 aa11.85□□□□□ -0.51
SYN3-201ENST00000332840 FXR2P51116 673 aaKnown RBP eCLIP11.85□□□□□ -0.51
SYN3-201ENST00000332840 RASGRF1Q13972 1273 aa11.85□□□□□ -0.51
SYN3-201ENST00000332840 RASA3Q14644 834 aa11.85□□□□□ -0.51
SYN3-201ENST00000332840 C8orf34Q49A92 452 aa11.85□□□□□ -0.51
SYN3-201ENST00000332840 TNNI3KQ59H18 835 aa11.85□□□□□ -0.51
SYN3-201ENST00000332840 CCDC158Q5M9N0 1113 aa11.85□□□□□ -0.51
SYN3-201ENST00000332840 DZIP1Q86YF9 867 aaKnown RBP11.85□□□□□ -0.51
SYN3-201ENST00000332840 PIP4P2Q8N4L2 257 aa11.85□□□□□ -0.51
SYN3-201ENST00000332840 LRRCC1Q9C099 1032 aa11.85□□□□□ -0.51
SYN3-201ENST00000332840 TDRD3Q9H7E2 651 aaKnown RBP11.85□□□□□ -0.51
SYN3-201ENST00000332840 FPGT-TNNI3KV9GXZ4 949 aa11.85□□□□□ -0.51
SYN3-201ENST00000332840 PAPPA2Q9BXP8 1791 aa11.84□□□□□ -0.51
SYN3-201ENST00000332840 ARID4AP29374 1257 aaPredicted RBP11.84□□□□□ -0.51
SYN3-201ENST00000332840 IREB2P48200 963 aaKnown RBP11.84□□□□□ -0.51
SYN3-201ENST00000332840 FAM83AQ86UY5 434 aa11.84□□□□□ -0.51
SYN3-201ENST00000332840 EXOC6BQ9Y2D4 811 aa11.84□□□□□ -0.51
SYN3-201ENST00000332840 ZNF646O15015 1829 aaPredicted RBP11.83□□□□□ -0.51
SYN3-201ENST00000332840 RPAP1Q9BWH6 1393 aaPredicted RBP11.83□□□□□ -0.52
SYN3-201ENST00000332840 APBB1O00213 710 aa11.83□□□□□ -0.52
SYN3-201ENST00000332840 PRDX5P30044 214 aa11.83□□□□□ -0.52
SYN3-201ENST00000332840 GSTO1P78417 241 aa11.83□□□□□ -0.52
SYN3-201ENST00000332840 GRIK5Q16478 980 aa11.83□□□□□ -0.52
SYN3-201ENST00000332840 MAP3K11Q16584 847 aa11.83□□□□□ -0.52
SYN3-201ENST00000332840 TTC39AQ5SRH9 613 aa11.83□□□□□ -0.52
SYN3-201ENST00000332840 PRAMEF18Q5VWM3 479 aa11.83□□□□□ -0.52
SYN3-201ENST00000332840 APOBEC3HQ6NTF7 200 aaKnown RBP11.83□□□□□ -0.52
SYN3-201ENST00000332840 PLEKHM2Q8IWE5 1019 aa11.83□□□□□ -0.52
SYN3-201ENST00000332840 SPATA5Q8NB90 893 aa11.83□□□□□ -0.52
SYN3-201ENST00000332840 SPDYE1Q8NFV5 336 aaPredicted RBP11.83□□□□□ -0.52
SYN3-201ENST00000332840 ZNF512BQ96KM6 892 aaPredicted RBP11.83□□□□□ -0.52
SYN3-201ENST00000332840 ABCF2Q9UG63 623 aa11.83□□□□□ -0.52
SYN3-201ENST00000332840 PCDHAC2Q9Y5I4 1007 aa11.83□□□□□ -0.52
SYN3-201ENST00000332840 FAM155AB1AL88 458 aaPredicted RBP11.82□□□□□ -0.52
SYN3-201ENST00000332840 TCP10L2B9ZVM9 353 aa11.82□□□□□ -0.52
SYN3-201ENST00000332840 UBE2Q2LH0YL09 131 aa11.82□□□□□ -0.52
SYN3-201ENST00000332840 SMARCA5O60264 1052 aaPredicted RBP11.82□□□□□ -0.52
SYN3-201ENST00000332840 TRPA1O75762 1119 aa11.82□□□□□ -0.52
SYN3-201ENST00000332840 MAP4K4O95819 1239 aaPredicted RBP11.82□□□□□ -0.52
SYN3-201ENST00000332840 BMP2KLQ5H9B9 411 aa11.82□□□□□ -0.52
SYN3-201ENST00000332840 LDLRAD1Q5T700 205 aa11.82□□□□□ -0.52
SYN3-201ENST00000332840 ERICH6Q7L0X2 663 aa11.82□□□□□ -0.52
SYN3-201ENST00000332840 RASAL3Q86YV0 1011 aa11.82□□□□□ -0.52
SYN3-201ENST00000332840 KIF1BPQ96EK5 621 aa11.82□□□□□ -0.52
SYN3-201ENST00000332840 SAGE1Q9NXZ1 904 aa11.82□□□□□ -0.52
SYN3-201ENST00000332840 HMG20BQ9P0W2 317 aa11.82□□□□□ -0.52
SYN3-201ENST00000332840 ANGEL1Q9UNK9 670 aaKnown RBP11.82□□□□□ -0.52
SYN3-201ENST00000332840 SCAF8Q9UPN6 1271 aaKnown RBP11.82□□□□□ -0.52
SYN3-201ENST00000332840 DAGLAQ9Y4D2 1042 aa11.82□□□□□ -0.52
SYN3-201ENST00000332840 ARAP2Q8WZ64 1704 aa11.81□□□□□ -0.52
SYN3-201ENST00000332840 LDHCP07864 332 aa11.81□□□□□ -0.52
SYN3-201ENST00000332840 KIF23Q02241 960 aaPredicted RBP11.81□□□□□ -0.52
SYN3-201ENST00000332840 SREBF2Q12772 1141 aa11.81□□□□□ -0.52
SYN3-201ENST00000332840 DIXDC1Q155Q3 683 aa11.81□□□□□ -0.52
SYN3-201ENST00000332840 TMED8Q6PL24 325 aaPredicted RBP11.81□□□□□ -0.52
SYN3-201ENST00000332840 ANKRD13AQ8IZ07 590 aa11.81□□□□□ -0.52
SYN3-201ENST00000332840 RHPN1Q8TCX5 695 aa11.81□□□□□ -0.52
SYN3-201ENST00000332840 FAM163AQ96GL9 167 aaPredicted RBP11.81□□□□□ -0.52
SYN3-201ENST00000332840 PCDH10Q9P2E7 1040 aa11.81□□□□□ -0.52
SYN3-201ENST00000332840 GAKO14976 1311 aa11.81□□□□□ -0.52
SYN3-201ENST00000332840 AOX1Q06278 1338 aa11.81□□□□□ -0.52
SYN3-201ENST00000332840 ZBTB48P10074 688 aaPredicted RBP11.8□□□□□ -0.52
SYN3-201ENST00000332840 PRKG1Q13976 671 aa11.8□□□□□ -0.52
SYN3-201ENST00000332840 NBPF12Q5TAG4 269 aaPredicted RBP11.8□□□□□ -0.52
SYN3-201ENST00000332840 DCAF15Q66K64 600 aa11.8□□□□□ -0.52
SYN3-201ENST00000332840 CLASRPQ8N2M8 674 aaKnown RBP11.8□□□□□ -0.52
SYN3-201ENST00000332840 SLC10A4Q96EP9 437 aa11.8□□□□□ -0.52
SYN3-201ENST00000332840 TEPSINQ96N21 525 aa11.8□□□□□ -0.52
SYN3-201ENST00000332840 DBNDD2Q9BQY9 259 aa11.8□□□□□ -0.52
SYN3-201ENST00000332840 OSBPL3Q9H4L5 887 aa11.8□□□□□ -0.52
SYN3-201ENST00000332840 LRP2BPQ9P2M1 347 aa11.8□□□□□ -0.52
SYN3-201ENST00000332840 MROH7-TTC4A0A0A0MT08 1334 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms