RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 AACSQ86V21 672 aa19.9■□□□□ 0.78
PDLIM1-201ENST00000329399 DAGLAQ9Y4D2 1042 aa19.9■□□□□ 0.78
PDLIM1-201ENST00000329399 TCP10L2B9ZVM9 353 aa19.89■□□□□ 0.77
PDLIM1-201ENST00000329399 HUNKP57058 714 aa19.89■□□□□ 0.77
PDLIM1-201ENST00000329399 GRM1Q13255 1194 aa19.89■□□□□ 0.77
PDLIM1-201ENST00000329399 RASA3Q14644 834 aa19.89■□□□□ 0.77
PDLIM1-201ENST00000329399 HHIPL2Q6UWX4 724 aa19.89■□□□□ 0.77
PDLIM1-201ENST00000329399 APOBEC3FQ8IUX4 373 aaKnown RBP19.89■□□□□ 0.77
PDLIM1-201ENST00000329399 ZIC5Q96T25 663 aa19.89■□□□□ 0.77
PDLIM1-201ENST00000329399 PRKG1Q13976 671 aa19.88■□□□□ 0.77
PDLIM1-201ENST00000329399 NBPF12Q5TAG4 269 aaPredicted RBP19.88■□□□□ 0.77
PDLIM1-201ENST00000329399 OTUD7AQ8TE49 926 aaPredicted RBP19.88■□□□□ 0.77
PDLIM1-201ENST00000329399 IPO9Q96P70 1041 aaKnown RBP19.88■□□□□ 0.77
PDLIM1-201ENST00000329399 PDS5AQ29RF7 1337 aaKnown RBP19.88■□□□□ 0.77
PDLIM1-201ENST00000329399 UBE2Q2LH0YL09 131 aa19.87■□□□□ 0.77
PDLIM1-201ENST00000329399 AOC2O75106 756 aa19.87■□□□□ 0.77
PDLIM1-201ENST00000329399 CYP2E1P05181 493 aaPredicted RBP19.87■□□□□ 0.77
PDLIM1-201ENST00000329399 SDSP20132 328 aa19.87■□□□□ 0.77
PDLIM1-201ENST00000329399 ZAP70P43403 619 aa19.87■□□□□ 0.77
PDLIM1-201ENST00000329399 MECOMQ03112 1051 aa19.87■□□□□ 0.77
PDLIM1-201ENST00000329399 TTC39AQ5SRH9 613 aa19.87■□□□□ 0.77
PDLIM1-201ENST00000329399 TICAM2Q86XR7 235 aa19.87■□□□□ 0.77
PDLIM1-201ENST00000329399 C2orf69Q8N8R5 385 aa19.87■□□□□ 0.77
PDLIM1-201ENST00000329399 CAPNS2Q96L46 248 aa19.87■□□□□ 0.77
PDLIM1-201ENST00000329399 ECHDC1Q9NTX5 307 aa19.87■□□□□ 0.77
PDLIM1-201ENST00000329399 AKAP11Q9UKA4 1901 aa19.87■□□□□ 0.77
PDLIM1-201ENST00000329399 WDR33Q9C0J8 1336 aaKnown RBP19.87■□□□□ 0.77
PDLIM1-201ENST00000329399 MYO1BO43795 1136 aa19.86■□□□□ 0.77
PDLIM1-201ENST00000329399 UQCRFS1P1P0C7P4 283 aa19.86■□□□□ 0.77
PDLIM1-201ENST00000329399 CCDC158Q5M9N0 1113 aa19.86■□□□□ 0.77
PDLIM1-201ENST00000329399 CDC42EP5Q6NZY7 148 aa19.86■□□□□ 0.77
PDLIM1-201ENST00000329399 TEPSINQ96N21 525 aa19.86■□□□□ 0.77
PDLIM1-201ENST00000329399 TBC1D32Q96NH3 1257 aa19.86■□□□□ 0.77
PDLIM1-201ENST00000329399 TMEM39BQ9GZU3 492 aa19.86■□□□□ 0.77
PDLIM1-201ENST00000329399 SSC5DA1L4H1 1573 aa19.86■□□□□ 0.77
PDLIM1-201ENST00000329399 EPB41L2O43491 1005 aaKnown RBP19.86■□□□□ 0.77
PDLIM1-201ENST00000329399 PAXIP1Q6ZW49 1069 aaPredicted RBP19.86■□□□□ 0.77
PDLIM1-201ENST00000329399 ZNF512BQ96KM6 892 aaPredicted RBP19.86■□□□□ 0.77
PDLIM1-201ENST00000329399 PIH1D3Q9NQM4 214 aaKnown RBP19.86■□□□□ 0.77
PDLIM1-201ENST00000329399 NFIAQ12857 509 aa19.85■□□□□ 0.77
PDLIM1-201ENST00000329399 ANTXR1Q9H6X2 564 aa19.85■□□□□ 0.77
PDLIM1-201ENST00000329399 MAST3O60307 1309 aa19.85■□□□□ 0.77
PDLIM1-201ENST00000329399 FAM155AB1AL88 458 aaPredicted RBP19.84■□□□□ 0.77
PDLIM1-201ENST00000329399 ECM29Q5VYK3 1845 aa19.84■□□□□ 0.77
PDLIM1-201ENST00000329399 ERICH6Q7L0X2 663 aa19.84■□□□□ 0.77
PDLIM1-201ENST00000329399 ZFPM1Q8IX07 1006 aa19.84■□□□□ 0.77
PDLIM1-201ENST00000329399 NSUN4Q96CB9 384 aaKnown RBP19.84■□□□□ 0.77
PDLIM1-201ENST00000329399 GAKO14976 1311 aa19.83■□□□□ 0.76
PDLIM1-201ENST00000329399 REC8O95072 547 aa19.83■□□□□ 0.76
PDLIM1-201ENST00000329399 SEC24BO95487 1268 aa19.83■□□□□ 0.76
PDLIM1-201ENST00000329399 PI4K2BQ8TCG2 481 aa19.83■□□□□ 0.76
PDLIM1-201ENST00000329399 C22orf23Q9BZE7 217 aa19.83■□□□□ 0.76
PDLIM1-201ENST00000329399 USP40Q9NVE5 1235 aa19.83■□□□□ 0.76
PDLIM1-201ENST00000329399 RBM25P49756 843 aaKnown RBP19.82■□□□□ 0.76
PDLIM1-201ENST00000329399 RGMBQ6NW40 437 aa19.82■□□□□ 0.76
PDLIM1-201ENST00000329399 DZIP1Q86YF9 867 aaKnown RBP19.82■□□□□ 0.76
PDLIM1-201ENST00000329399 ZGPATQ8N5A5 531 aaKnown RBP19.82■□□□□ 0.76
PDLIM1-201ENST00000329399 IL27Q8NEV9 243 aa19.82■□□□□ 0.76
PDLIM1-201ENST00000329399 FAM163AQ96GL9 167 aaPredicted RBP19.82■□□□□ 0.76
PDLIM1-201ENST00000329399 HHIPL1Q96JK4 782 aa19.82■□□□□ 0.76
PDLIM1-201ENST00000329399 RAI14Q9P0K7 980 aa19.82■□□□□ 0.76
PDLIM1-201ENST00000329399 FAM198AQ9UFP1 575 aa19.82■□□□□ 0.76
PDLIM1-201ENST00000329399 MYH2Q9UKX2 1941 aa19.82■□□□□ 0.76
PDLIM1-201ENST00000329399 MYO5AQ9Y4I1 1855 aaKnown RBP19.81■□□□□ 0.76
PDLIM1-201ENST00000329399 TTLL12Q14166 644 aaPredicted RBP19.81■□□□□ 0.76
PDLIM1-201ENST00000329399 SPTY2D1Q68D10 685 aaPredicted RBP19.81■□□□□ 0.76
PDLIM1-201ENST00000329399 ADGRA1Q86SQ6 560 aa19.81■□□□□ 0.76
PDLIM1-201ENST00000329399 EDC3Q96F86 508 aaKnown RBP19.81■□□□□ 0.76
PDLIM1-201ENST00000329399 LRP2BPQ9P2M1 347 aa19.81■□□□□ 0.76
PDLIM1-201ENST00000329399 TRIM6-TRIM34B2RNG4 842 aa19.8■□□□□ 0.76
PDLIM1-201ENST00000329399 HIP1O00291 1037 aa19.8■□□□□ 0.76
PDLIM1-201ENST00000329399 USP2O75604 605 aaPredicted RBP19.8■□□□□ 0.76
PDLIM1-201ENST00000329399 ZNF157P51786 506 aaPredicted RBP19.8■□□□□ 0.76
PDLIM1-201ENST00000329399 TCP10Q12799 353 aa19.8■□□□□ 0.76
PDLIM1-201ENST00000329399 ANGEL1Q9UNK9 670 aaKnown RBP19.8■□□□□ 0.76
PDLIM1-201ENST00000329399 PPP2R3BQ9Y5P8 575 aa19.8■□□□□ 0.76
PDLIM1-201ENST00000329399 MROH7-TTC4A0A0A0MT08 1334 aa19.8■□□□□ 0.76
PDLIM1-201ENST00000329399 SLURP2P0DP57 97 aa19.79■□□□□ 0.76
PDLIM1-201ENST00000329399 BTDP43251 543 aa19.79■□□□□ 0.76
PDLIM1-201ENST00000329399 MFAP1P55081 439 aaKnown RBP19.79■□□□□ 0.76
PDLIM1-201ENST00000329399 RHBDL3P58872 404 aa19.79■□□□□ 0.76
PDLIM1-201ENST00000329399 FKBP1BP68106 108 aa19.79■□□□□ 0.76
PDLIM1-201ENST00000329399 LDLRAD1Q5T700 205 aa19.79■□□□□ 0.76
PDLIM1-201ENST00000329399 EVI5LQ96CN4 794 aa19.79■□□□□ 0.76
PDLIM1-201ENST00000329399 CLMNQ96JQ2 1002 aa19.79■□□□□ 0.76
PDLIM1-201ENST00000329399 DDX4Q9NQI0 724 aaKnown RBP19.79■□□□□ 0.76
PDLIM1-201ENST00000329399 GPR75-ASB3A0A0A6YYF3 556 aa19.79■□□□□ 0.76
PDLIM1-201ENST00000329399 HSPA1AP0DMV8 641 aaKnown RBP19.79■□□□□ 0.76
PDLIM1-201ENST00000329399 HSPA1BP0DMV9 641 aaKnown RBP19.79■□□□□ 0.76
PDLIM1-201ENST00000329399 FKBP1CQ5VVH2 108 aa19.79■□□□□ 0.76
PDLIM1-201ENST00000329399 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.79■□□□□ 0.76
PDLIM1-201ENST00000329399 WDHD1O75717 1129 aaPredicted RBP19.78■□□□□ 0.76
PDLIM1-201ENST00000329399 ATP5JP18859 108 aa19.78■□□□□ 0.76
PDLIM1-201ENST00000329399 ECE1P42892 770 aa19.78■□□□□ 0.76
PDLIM1-201ENST00000329399 TNFAIP1Q13829 316 aa19.78■□□□□ 0.76
PDLIM1-201ENST00000329399 SH3BP5LQ7L8J4 393 aa19.78■□□□□ 0.76
PDLIM1-201ENST00000329399 RASAL3Q86YV0 1011 aa19.78■□□□□ 0.76
PDLIM1-201ENST00000329399 WBP1LQ9NX94 342 aa19.78■□□□□ 0.76
PDLIM1-201ENST00000329399 PAPPA2Q9BXP8 1791 aa19.78■□□□□ 0.76
PDLIM1-201ENST00000329399 NF2P35240 595 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms