RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 CAVIN4Q5BKX8 364 aa12.39□□□□□ -0.43
CUL4A-201ENST00000326335 CPLX2Q6PUV4 134 aaKnown RBP12.39□□□□□ -0.43
CUL4A-201ENST00000326335 APOA5Q6Q788 366 aa12.39□□□□□ -0.43
CUL4A-201ENST00000326335 ILDR1Q86SU0 546 aaPredicted RBP12.39□□□□□ -0.43
CUL4A-201ENST00000326335 TRIM28Q13263 835 aaKnown RBP12.38□□□□□ -0.43
CUL4A-201ENST00000326335 TTF1Q15361 905 aaPredicted RBP12.38□□□□□ -0.43
CUL4A-201ENST00000326335 KRT40Q6A162 431 aa12.38□□□□□ -0.43
CUL4A-201ENST00000326335 ZNF396Q96N95 335 aaPredicted RBP12.38□□□□□ -0.43
CUL4A-201ENST00000326335 CPVLQ9H3G5 476 aa12.38□□□□□ -0.43
CUL4A-201ENST00000326335 RIC1Q4ADV7 1423 aa12.38□□□□□ -0.43
CUL4A-201ENST00000326335 UQCRHLA0A096LP55 91 aa12.38□□□□□ -0.43
CUL4A-201ENST00000326335 FAM205CA6NFA0 338 aa12.38□□□□□ -0.43
CUL4A-201ENST00000326335 UQCRHP07919 91 aa12.38□□□□□ -0.43
CUL4A-201ENST00000326335 RFC4P35249 363 aa12.38□□□□□ -0.43
CUL4A-201ENST00000326335 NAA16Q6N069 864 aaPredicted RBP12.38□□□□□ -0.43
CUL4A-201ENST00000326335 NACAP1Q9BZK3 213 aa12.38□□□□□ -0.43
CUL4A-201ENST00000326335 ZNF652Q9Y2D9 606 aa12.38□□□□□ -0.43
CUL4A-201ENST00000326335 USP17L12C9JPN9 530 aa12.38□□□□□ -0.43
CUL4A-201ENST00000326335 USP17L21D6R901 530 aa12.38□□□□□ -0.43
CUL4A-201ENST00000326335 LMOD1P29536 600 aaPredicted RBP12.38□□□□□ -0.43
CUL4A-201ENST00000326335 WTAPQ15007 396 aa12.38□□□□□ -0.43
CUL4A-201ENST00000326335 ZNF827Q17R98 1081 aa12.38□□□□□ -0.43
CUL4A-201ENST00000326335 GRAMD1CQ8IYS0 662 aa12.38□□□□□ -0.43
CUL4A-201ENST00000326335 VGLL2Q8N8G2 317 aa12.38□□□□□ -0.43
CUL4A-201ENST00000326335 CDC5LQ99459 802 aaKnown RBP12.38□□□□□ -0.43
CUL4A-201ENST00000326335 TMX1Q9H3N1 280 aa12.38□□□□□ -0.43
CUL4A-201ENST00000326335 VPS54Q9P1Q0 977 aa12.38□□□□□ -0.43
CUL4A-201ENST00000326335 NOL7Q9UMY1 257 aaKnown RBP12.38□□□□□ -0.43
CUL4A-201ENST00000326335 MAGEB6P1A0A0J9YX57 407 aa12.37□□□□□ -0.43
CUL4A-201ENST00000326335 GSG1L2A8MUP6 293 aa12.37□□□□□ -0.43
CUL4A-201ENST00000326335 RIMBP2O15034 1052 aa12.37□□□□□ -0.43
CUL4A-201ENST00000326335 SPTLC2O15270 562 aa12.37□□□□□ -0.43
CUL4A-201ENST00000326335 DHX16O60231 1041 aaKnown RBP12.37□□□□□ -0.43
CUL4A-201ENST00000326335 UQCRFS1P1P0C7P4 283 aa12.37□□□□□ -0.43
CUL4A-201ENST00000326335 FAM200AQ8TCP9 573 aa12.37□□□□□ -0.43
CUL4A-201ENST00000326335 NLRP3Q96P20 1036 aa12.37□□□□□ -0.43
CUL4A-201ENST00000326335 TULP1O00294 542 aaPredicted RBP12.37□□□□□ -0.43
CUL4A-201ENST00000326335 TOM1O60784 492 aa12.37□□□□□ -0.43
CUL4A-201ENST00000326335 NTSR2O95665 410 aa12.37□□□□□ -0.43
CUL4A-201ENST00000326335 CASP1P29466 404 aa12.37□□□□□ -0.43
CUL4A-201ENST00000326335 AKAP17AQ02040 695 aaKnown RBP12.37□□□□□ -0.43
CUL4A-201ENST00000326335 GOLGA8FQ08AF8 430 aa12.37□□□□□ -0.43
CUL4A-201ENST00000326335 GOLGA8DPQ0D2H9 430 aa12.37□□□□□ -0.43
CUL4A-201ENST00000326335 SAMD1Q6SPF0 538 aaPredicted RBP12.37□□□□□ -0.43
CUL4A-201ENST00000326335 MRC1P22897 1456 aa12.37□□□□□ -0.43
CUL4A-201ENST00000326335 TSGA10IPQ3SY00 556 aa12.37□□□□□ -0.43
CUL4A-201ENST00000326335 OLFM4Q6UX06 510 aa12.37□□□□□ -0.43
CUL4A-201ENST00000326335 FAM196AQ6ZSG2 479 aa12.37□□□□□ -0.43
CUL4A-201ENST00000326335 KLHL10Q6JEL2 608 aa12.36□□□□□ -0.43
CUL4A-201ENST00000326335 FBXO18Q8NFZ0 1043 aa12.36□□□□□ -0.43
CUL4A-201ENST00000326335 CLSTN2Q9H4D0 955 aa12.36□□□□□ -0.43
CUL4A-201ENST00000326335 ZSCAN16Q9H4T2 348 aaPredicted RBP12.36□□□□□ -0.43
CUL4A-201ENST00000326335 CLIP2Q9UDT6 1046 aa12.36□□□□□ -0.43
CUL4A-201ENST00000326335 FOXN1O15353 648 aa12.36□□□□□ -0.43
CUL4A-201ENST00000326335 MYSM1Q5VVJ2 828 aa12.36□□□□□ -0.43
CUL4A-201ENST00000326335 RASGRP2Q7LDG7 609 aa12.36□□□□□ -0.43
CUL4A-201ENST00000326335 OXER1Q8TDS5 423 aa12.36□□□□□ -0.43
CUL4A-201ENST00000326335 MROH5Q6ZUA9 1318 aa12.36□□□□□ -0.43
CUL4A-201ENST00000326335 GRIN1Q05586 938 aa12.36□□□□□ -0.43
CUL4A-201ENST00000326335 NFIXQ14938 502 aa12.36□□□□□ -0.43
CUL4A-201ENST00000326335 DZIP1Q86YF9 867 aaKnown RBP12.36□□□□□ -0.43
CUL4A-201ENST00000326335 TMEM87AQ8NBN3 555 aa12.36□□□□□ -0.43
CUL4A-201ENST00000326335 PDLIM2Q96JY6 352 aa12.36□□□□□ -0.43
CUL4A-201ENST00000326335 VAT1LQ9HCJ6 419 aa12.36□□□□□ -0.43
CUL4A-201ENST00000326335 MINPP1Q9UNW1 487 aa12.36□□□□□ -0.43
CUL4A-201ENST00000326335 PATL2C9JE40 543 aaKnown RBP12.35□□□□□ -0.43
CUL4A-201ENST00000326335 DPCR1Q3MIW9 517 aa12.35□□□□□ -0.43
CUL4A-201ENST00000326335 NOM1Q5C9Z4 860 aaKnown RBP12.35□□□□□ -0.43
CUL4A-201ENST00000326335 AKNAD1Q5T1N1 836 aa12.35□□□□□ -0.43
CUL4A-201ENST00000326335 FAM177A1Q8N128 213 aaPredicted RBP12.35□□□□□ -0.43
CUL4A-201ENST00000326335 SLC44A5Q8NCS7 719 aa12.35□□□□□ -0.43
CUL4A-201ENST00000326335 SMARCC2Q8TAQ2 1214 aa12.35□□□□□ -0.43
CUL4A-201ENST00000326335 DYNLL2Q96FJ2 89 aa12.35□□□□□ -0.43
CUL4A-201ENST00000326335 ZNF274Q96GC6 653 aaPredicted RBP12.35□□□□□ -0.43
CUL4A-201ENST00000326335 PLIN2Q99541 437 aa12.35□□□□□ -0.43
CUL4A-201ENST00000326335 CABP5Q9NP86 173 aa12.35□□□□□ -0.43
CUL4A-201ENST00000326335 DDX19AQ9NUU7 478 aaKnown RBP12.35□□□□□ -0.43
CUL4A-201ENST00000326335 RTCBQ9Y3I0 505 aaKnown RBP12.35□□□□□ -0.43
CUL4A-201ENST00000326335 LETM1O95202 739 aaPredicted RBP12.35□□□□□ -0.43
CUL4A-201ENST00000326335 EIF6P56537 245 aaKnown RBP12.35□□□□□ -0.43
CUL4A-201ENST00000326335 SSRP1Q08945 709 aaKnown RBP12.35□□□□□ -0.43
CUL4A-201ENST00000326335 PNOCQ13519 176 aa12.35□□□□□ -0.43
CUL4A-201ENST00000326335 RTN1Q16799 776 aa12.35□□□□□ -0.43
CUL4A-201ENST00000326335 MRPS27Q92552 414 aaKnown RBP12.35□□□□□ -0.43
CUL4A-201ENST00000326335 MCM9Q9NXL9 1143 aa12.35□□□□□ -0.43
CUL4A-201ENST00000326335 STX8Q9UNK0 236 aa12.35□□□□□ -0.43
CUL4A-201ENST00000326335 V9GY48 417 aaPredicted RBP12.35□□□□□ -0.43
CUL4A-201ENST00000326335 SLURP2P0DP57 97 aa12.35□□□□□ -0.43
CUL4A-201ENST00000326335 CDC25AP30304 524 aa12.35□□□□□ -0.43
CUL4A-201ENST00000326335 RPS8P62241 208 aaKnown RBP12.35□□□□□ -0.43
CUL4A-201ENST00000326335 ATP2B2Q01814 1243 aa12.35□□□□□ -0.43
CUL4A-201ENST00000326335 SART3Q15020 963 aaKnown RBP12.35□□□□□ -0.43
CUL4A-201ENST00000326335 MSL1Q68DK7 614 aa12.35□□□□□ -0.43
CUL4A-201ENST00000326335 AK7Q96M32 723 aa12.35□□□□□ -0.43
CUL4A-201ENST00000326335 GNL3LQ9NVN8 582 aaKnown RBP12.35□□□□□ -0.43
CUL4A-201ENST00000326335 TAF1P21675 1872 aa12.35□□□□□ -0.43
CUL4A-201ENST00000326335 SIPA1L3O60292 1781 aaPredicted RBP12.34□□□□□ -0.43
CUL4A-201ENST00000326335 WDHD1O75717 1129 aaPredicted RBP12.34□□□□□ -0.43
CUL4A-201ENST00000326335 USP17L8P0C7I0 530 aa12.34□□□□□ -0.43
CUL4A-201ENST00000326335 AFMP43652 599 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms