RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 IREB2P48200 963 aaKnown RBP19.76■□□□□ 0.75
HDDC2-201ENST00000318787 SPATA5Q8NB90 893 aa19.76■□□□□ 0.75
HDDC2-201ENST00000318787 DBNDD2Q9BQY9 259 aa19.76■□□□□ 0.75
HDDC2-201ENST00000318787 HMG20BQ9P0W2 317 aa19.76■□□□□ 0.75
HDDC2-201ENST00000318787 TCP10Q12799 353 aa19.75■□□□□ 0.75
HDDC2-201ENST00000318787 CCDC158Q5M9N0 1113 aa19.75■□□□□ 0.75
HDDC2-201ENST00000318787 SPTY2D1Q68D10 685 aaPredicted RBP19.75■□□□□ 0.75
HDDC2-201ENST00000318787 TBC1D9Q6ZT07 1266 aa19.75■□□□□ 0.75
HDDC2-201ENST00000318787 ERICH6Q7L0X2 663 aa19.75■□□□□ 0.75
HDDC2-201ENST00000318787 SLC10A4Q96EP9 437 aa19.75■□□□□ 0.75
HDDC2-201ENST00000318787 CLMNQ96JQ2 1002 aa19.75■□□□□ 0.75
HDDC2-201ENST00000318787 MRIQ9BWK5 157 aa19.75■□□□□ 0.75
HDDC2-201ENST00000318787 CCDC8Q9H0W5 538 aaPredicted RBP19.75■□□□□ 0.75
HDDC2-201ENST00000318787 SNRKQ9NRH2 765 aa19.75■□□□□ 0.75
HDDC2-201ENST00000318787 CA12O43570 354 aa19.74■□□□□ 0.75
HDDC2-201ENST00000318787 TRPA1O75762 1119 aa19.74■□□□□ 0.75
HDDC2-201ENST00000318787 UQCRFS1P1P0C7P4 283 aa19.74■□□□□ 0.75
HDDC2-201ENST00000318787 CSRNP1Q96S65 589 aa19.74■□□□□ 0.75
HDDC2-201ENST00000318787 CHMP4BQ9H444 224 aaKnown RBP19.74■□□□□ 0.75
HDDC2-201ENST00000318787 USP40Q9NVE5 1235 aa19.74■□□□□ 0.75
HDDC2-201ENST00000318787 NOP58Q9Y2X3 529 aaKnown RBP19.74■□□□□ 0.75
HDDC2-201ENST00000318787 ARID4AP29374 1257 aaPredicted RBP19.73■□□□□ 0.75
HDDC2-201ENST00000318787 MCAMP43121 646 aa19.73■□□□□ 0.75
HDDC2-201ENST00000318787 CDC42EP5Q6NZY7 148 aa19.73■□□□□ 0.75
HDDC2-201ENST00000318787 TEPSINQ96N21 525 aa19.73■□□□□ 0.75
HDDC2-201ENST00000318787 GPR108Q9NPR9 543 aa19.73■□□□□ 0.75
HDDC2-201ENST00000318787 TLR7Q9NYK1 1049 aaKnown RBP19.73■□□□□ 0.75
HDDC2-201ENST00000318787 RAI14Q9P0K7 980 aa19.73■□□□□ 0.75
HDDC2-201ENST00000318787 PDS5AQ29RF7 1337 aaKnown RBP19.73■□□□□ 0.75
HDDC2-201ENST00000318787 DOCK2Q92608 1830 aa19.73■□□□□ 0.75
HDDC2-201ENST00000318787 HMMRO75330 724 aa19.72■□□□□ 0.75
HDDC2-201ENST00000318787 USP2O75604 605 aaPredicted RBP19.72■□□□□ 0.75
HDDC2-201ENST00000318787 LDLRAD1Q5T700 205 aa19.72■□□□□ 0.75
HDDC2-201ENST00000318787 SLF2Q8IX21 1173 aa19.72■□□□□ 0.75
HDDC2-201ENST00000318787 IL1RAPL2Q9NP60 686 aa19.72■□□□□ 0.75
HDDC2-201ENST00000318787 ZBTB40Q9NUA8 1239 aa19.72■□□□□ 0.75
HDDC2-201ENST00000318787 LRP2BPQ9P2M1 347 aa19.72■□□□□ 0.75
HDDC2-201ENST00000318787 MAST2Q6P0Q8 1798 aa19.72■□□□□ 0.75
HDDC2-201ENST00000318787 MECOMQ03112 1051 aa19.71■□□□□ 0.75
HDDC2-201ENST00000318787 AACSQ86V21 672 aa19.71■□□□□ 0.75
HDDC2-201ENST00000318787 ERC1Q8IUD2 1116 aa19.71■□□□□ 0.75
HDDC2-201ENST00000318787 ANKRD13AQ8IZ07 590 aa19.71■□□□□ 0.75
HDDC2-201ENST00000318787 ELP3Q9H9T3 547 aa19.71■□□□□ 0.75
HDDC2-201ENST00000318787 BTDP43251 543 aa19.7■□□□□ 0.74
HDDC2-201ENST00000318787 NFIAQ12857 509 aa19.7■□□□□ 0.74
HDDC2-201ENST00000318787 PDE3AQ14432 1141 aa19.7■□□□□ 0.74
HDDC2-201ENST00000318787 MAP3K11Q16584 847 aa19.7■□□□□ 0.74
HDDC2-201ENST00000318787 HSP90AB4PQ58FF6 505 aa19.7■□□□□ 0.74
HDDC2-201ENST00000318787 FAM83AQ86UY5 434 aa19.7■□□□□ 0.74
HDDC2-201ENST00000318787 RPAP2Q8IXW5 612 aaPredicted RBP19.7■□□□□ 0.74
HDDC2-201ENST00000318787 RNF186Q9NXI6 227 aa19.7■□□□□ 0.74
HDDC2-201ENST00000318787 DBNLQ9UJU6 430 aaKnown RBP19.7■□□□□ 0.74
HDDC2-201ENST00000318787 PICALMQ13492 652 aa19.7■□□□□ 0.74
HDDC2-201ENST00000318787 SPRYD7Q5W111 196 aa19.7■□□□□ 0.74
HDDC2-201ENST00000318787 EAF2Q96CJ1 260 aaPredicted RBP19.7■□□□□ 0.74
HDDC2-201ENST00000318787 MROH7-TTC4A0A0A0MT08 1334 aa19.69■□□□□ 0.74
HDDC2-201ENST00000318787 SREBF2Q12772 1141 aa19.69■□□□□ 0.74
HDDC2-201ENST00000318787 FKBP1CQ5VVH2 108 aa19.69■□□□□ 0.74
HDDC2-201ENST00000318787 MIGA2Q7L4E1 593 aa19.69■□□□□ 0.74
HDDC2-201ENST00000318787 ZSCAN29Q8IWY8 852 aaPredicted RBP19.69■□□□□ 0.74
HDDC2-201ENST00000318787 REM2Q8IYK8 340 aaPredicted RBP19.69■□□□□ 0.74
HDDC2-201ENST00000318787 WNK4Q96J92 1243 aa19.69■□□□□ 0.74
HDDC2-201ENST00000318787 CSADQ9Y600 493 aa19.69■□□□□ 0.74
HDDC2-201ENST00000318787 GSTO1P78417 241 aa19.68■□□□□ 0.74
HDDC2-201ENST00000318787 RHPN1Q8TCX5 695 aa19.68■□□□□ 0.74
HDDC2-201ENST00000318787 FAM151AQ8WW52 585 aa19.68■□□□□ 0.74
HDDC2-201ENST00000318787 HOOK2Q96ED9 719 aa19.68■□□□□ 0.74
HDDC2-201ENST00000318787 WRNIP1Q96S55 665 aa19.68■□□□□ 0.74
HDDC2-201ENST00000318787 GAKO14976 1311 aa19.67■□□□□ 0.74
HDDC2-201ENST00000318787 ZAP70P43403 619 aa19.67■□□□□ 0.74
HDDC2-201ENST00000318787 RGS3P49796 1198 aa19.67■□□□□ 0.74
HDDC2-201ENST00000318787 VGLL4Q14135 290 aa19.67■□□□□ 0.74
HDDC2-201ENST00000318787 DCAF15Q66K64 600 aa19.67■□□□□ 0.74
HDDC2-201ENST00000318787 SIRT2Q8IXJ6 389 aa19.67■□□□□ 0.74
HDDC2-201ENST00000318787 OPTNQ96CV9 577 aa19.67■□□□□ 0.74
HDDC2-201ENST00000318787 NOL10Q9BSC4 688 aaKnown RBP19.67■□□□□ 0.74
HDDC2-201ENST00000318787 SAGE1Q9NXZ1 904 aa19.67■□□□□ 0.74
HDDC2-201ENST00000318787 FAM198AQ9UFP1 575 aa19.67■□□□□ 0.74
HDDC2-201ENST00000318787 LAMB1P07942 1786 aa19.66■□□□□ 0.74
HDDC2-201ENST00000318787 ZBTB22O15209 634 aa19.66■□□□□ 0.74
HDDC2-201ENST00000318787 TBC1D8O95759 1140 aa19.66■□□□□ 0.74
HDDC2-201ENST00000318787 LDHCP07864 332 aa19.66■□□□□ 0.74
HDDC2-201ENST00000318787 MAP3K9P80192 1104 aa19.66■□□□□ 0.74
HDDC2-201ENST00000318787 CLASRPQ8N2M8 674 aaKnown RBP19.66■□□□□ 0.74
HDDC2-201ENST00000318787 NSUN4Q96CB9 384 aaKnown RBP19.66■□□□□ 0.74
HDDC2-201ENST00000318787 NDUFB9Q9Y6M9 179 aa19.66■□□□□ 0.74
HDDC2-201ENST00000318787 RPAP1Q9BWH6 1393 aaPredicted RBP19.66■□□□□ 0.74
HDDC2-201ENST00000318787 CYP2E1P05181 493 aaPredicted RBP19.65■□□□□ 0.74
HDDC2-201ENST00000318787 ZBTB48P10074 688 aaPredicted RBP19.65■□□□□ 0.74
HDDC2-201ENST00000318787 NAA16Q6N069 864 aaPredicted RBP19.65■□□□□ 0.74
HDDC2-201ENST00000318787 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.65■□□□□ 0.74
HDDC2-201ENST00000318787 ZFPM1Q8IX07 1006 aa19.65■□□□□ 0.74
HDDC2-201ENST00000318787 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.65■□□□□ 0.747e-6■■■□□ 14.8
HDDC2-201ENST00000318787 ZNF384Q8TF68 577 aa19.65■□□□□ 0.74
HDDC2-201ENST00000318787 ZKSCAN4Q969J2 545 aaPredicted RBP19.65■□□□□ 0.74
HDDC2-201ENST00000318787 KIF1BPQ96EK5 621 aa19.65■□□□□ 0.74
HDDC2-201ENST00000318787 OTUD5Q96G74 571 aa19.65■□□□□ 0.74
HDDC2-201ENST00000318787 CDK5RAP2Q96SN8 1893 aa19.65■□□□□ 0.74
HDDC2-201ENST00000318787 MANSC4A6NHS7 340 aaPredicted RBP19.64■□□□□ 0.73
HDDC2-201ENST00000318787 IFIT2P09913 472 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms