RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 KCNG4Q8TDN1 519 aa16.29■□□□□ 0.2
PABPC1-201ENST00000318607 ANKRD24Q8TF21 1146 aa16.29■□□□□ 0.2
PABPC1-201ENST00000318607 IQSEC3Q9UPP2 1182 aaPredicted RBP16.29■□□□□ 0.2
PABPC1-201ENST00000318607 MROH7-TTC4A0A0A0MT08 1334 aa16.29■□□□□ 0.2
PABPC1-201ENST00000318607 SNAP23O00161 211 aa16.29■□□□□ 0.2
PABPC1-201ENST00000318607 ZNF213O14771 459 aa16.29■□□□□ 0.2
PABPC1-201ENST00000318607 LRRFIP1Q32MZ4 808 aaKnown RBP16.29■□□□□ 0.2
PABPC1-201ENST00000318607 DRC1Q96MC2 740 aa16.29■□□□□ 0.2
PABPC1-201ENST00000318607 KCNG1Q9UIX4 513 aa16.29■□□□□ 0.2
PABPC1-201ENST00000318607 FAN1Q9Y2M0 1017 aa16.29■□□□□ 0.2
PABPC1-201ENST00000318607 FGAP02671 866 aa16.29■□□□□ 0.2
PABPC1-201ENST00000318607 GPTP24298 496 aa16.29■□□□□ 0.2
PABPC1-201ENST00000318607 SYCP1Q15431 976 aa16.29■□□□□ 0.2
PABPC1-201ENST00000318607 LONRF2Q1L5Z9 754 aa16.29■□□□□ 0.2
PABPC1-201ENST00000318607 NAA16Q6N069 864 aaPredicted RBP16.29■□□□□ 0.2
PABPC1-201ENST00000318607 PPFIBP1Q86W92 1011 aa16.29■□□□□ 0.2
PABPC1-201ENST00000318607 A0A1B0GUL7 405 aa16.28■□□□□ 0.2
PABPC1-201ENST00000318607 CDC25AP30304 524 aa16.28■□□□□ 0.2
PABPC1-201ENST00000318607 AXDND1Q5T1B0 1012 aaPredicted RBP16.28■□□□□ 0.2
PABPC1-201ENST00000318607 CCDC102BQ68D86 513 aa16.28■□□□□ 0.2
PABPC1-201ENST00000318607 CC2D1AQ6P1N0 951 aaPredicted RBP16.28■□□□□ 0.2
PABPC1-201ENST00000318607 RASSF8Q8NHQ8 419 aa16.28■□□□□ 0.2
PABPC1-201ENST00000318607 PSMB7Q99436 277 aa16.28■□□□□ 0.2
PABPC1-201ENST00000318607 RASSF4Q9H2L5 321 aa16.28■□□□□ 0.2
PABPC1-201ENST00000318607 H3BQF6 201 aa16.28■□□□□ 0.2
PABPC1-201ENST00000318607 MYO1CO00159 1063 aa16.28■□□□□ 0.2
PABPC1-201ENST00000318607 ATP5JP18859 108 aa16.28■□□□□ 0.2
PABPC1-201ENST00000318607 METAP2P50579 478 aaKnown RBP eCLIP16.28■□□□□ 0.28e-11■■■□□ 16.6
PABPC1-201ENST00000318607 DHX8Q14562 1220 aaKnown RBP16.28■□□□□ 0.2
PABPC1-201ENST00000318607 DDX21Q9NR30 783 aaKnown RBP eCLIP16.28■□□□□ 0.2
PABPC1-201ENST00000318607 NPHP4O75161 1426 aaPredicted RBP16.28■□□□□ 0.2
PABPC1-201ENST00000318607 TADA3O75528 432 aa16.28■□□□□ 0.2
PABPC1-201ENST00000318607 TBC1D8O95759 1140 aa16.28■□□□□ 0.2
PABPC1-201ENST00000318607 FBXO18Q8NFZ0 1043 aa16.28■□□□□ 0.2
PABPC1-201ENST00000318607 PARP3Q9Y6F1 533 aa16.28■□□□□ 0.2
PABPC1-201ENST00000318607 MAST3O60307 1309 aa16.27■□□□□ 0.2
PABPC1-201ENST00000318607 TEX33O43247 280 aa16.27■□□□□ 0.2
PABPC1-201ENST00000318607 USP49Q70CQ1 688 aa16.27■□□□□ 0.2
PABPC1-201ENST00000318607 RIN2Q8WYP3 895 aaPredicted RBP16.27■□□□□ 0.2
PABPC1-201ENST00000318607 CEP126Q9P2H0 1117 aa16.27■□□□□ 0.2
PABPC1-201ENST00000318607 KCNH3Q9ULD8 1083 aa16.27■□□□□ 0.2
PABPC1-201ENST00000318607 PHF8Q9UPP1 1060 aa16.27■□□□□ 0.2
PABPC1-201ENST00000318607 CAMTA1Q9Y6Y1 1673 aa16.27■□□□□ 0.2
PABPC1-201ENST00000318607 ABL1P00519 1130 aa16.27■□□□□ 0.19
PABPC1-201ENST00000318607 CHMP4BP1P59074 171 aa16.27■□□□□ 0.19
PABPC1-201ENST00000318607 KRT40Q6A162 431 aa16.27■□□□□ 0.19
PABPC1-201ENST00000318607 GSPT2Q8IYD1 628 aaKnown RBP16.27■□□□□ 0.19
PABPC1-201ENST00000318607 ACRBPQ8NEB7 543 aa16.27■□□□□ 0.19
PABPC1-201ENST00000318607 ORAI2Q96SN7 254 aa16.27■□□□□ 0.19
PABPC1-201ENST00000318607 BTBD18B2RXH4 712 aa16.27■□□□□ 0.19
PABPC1-201ENST00000318607 EPB41L2O43491 1005 aaKnown RBP16.27■□□□□ 0.19
PABPC1-201ENST00000318607 PRR29P0C7W0 189 aa16.27■□□□□ 0.19
PABPC1-201ENST00000318607 SF3A3Q12874 501 aaKnown RBP eCLIP16.27■□□□□ 0.194e-9■■■■■ 29.3
PABPC1-201ENST00000318607 SART3Q15020 963 aaKnown RBP16.27■□□□□ 0.19
PABPC1-201ENST00000318607 AKAP4Q5JQC9 854 aa16.27■□□□□ 0.19
PABPC1-201ENST00000318607 GOLGA6L1Q8N7Z2 621 aa16.27■□□□□ 0.19
PABPC1-201ENST00000318607 MRPL44Q9H9J2 332 aaKnown RBP16.27■□□□□ 0.19
PABPC1-201ENST00000318607 GUCA1BQ9UMX6 200 aa16.27■□□□□ 0.19
PABPC1-201ENST00000318607 TMEM2Q9UHN6 1383 aa16.26■□□□□ 0.19
PABPC1-201ENST00000318607 VWA3AA6NCI4 1184 aa16.26■□□□□ 0.19
PABPC1-201ENST00000318607 NCAPHQ15003 741 aa16.26■□□□□ 0.19
PABPC1-201ENST00000318607 TTLL7Q6ZT98 887 aa16.26■□□□□ 0.19
PABPC1-201ENST00000318607 SYNE4Q8N205 404 aa16.26■□□□□ 0.19
PABPC1-201ENST00000318607 TXLNBQ8N3L3 684 aa16.26■□□□□ 0.19
PABPC1-201ENST00000318607 PLIN2Q99541 437 aa16.26■□□□□ 0.19
PABPC1-201ENST00000318607 PUS7LQ9H0K6 701 aaKnown RBP16.26■□□□□ 0.19
PABPC1-201ENST00000318607 VPS16Q9H269 839 aa16.26■□□□□ 0.19
PABPC1-201ENST00000318607 SERTAD1Q9UHV2 236 aa16.26■□□□□ 0.19
PABPC1-201ENST00000318607 A1BGP04217 495 aa16.26■□□□□ 0.19
PABPC1-201ENST00000318607 ZNF790Q6PG37 636 aa16.26■□□□□ 0.19
PABPC1-201ENST00000318607 OSBPL5Q9H0X9 879 aaPredicted RBP16.26■□□□□ 0.19
PABPC1-201ENST00000318607 FMN2Q9NZ56 1722 aa16.26■□□□□ 0.19
PABPC1-201ENST00000318607 CBFA2T2O43439 604 aa16.25■□□□□ 0.19
PABPC1-201ENST00000318607 ZAP70P43403 619 aa16.25■□□□□ 0.19
PABPC1-201ENST00000318607 SCARF1Q14162 830 aa16.25■□□□□ 0.19
PABPC1-201ENST00000318607 TRIM65Q6PJ69 517 aa16.25■□□□□ 0.19
PABPC1-201ENST00000318607 DHX16O60231 1041 aaKnown RBP16.25■□□□□ 0.19
PABPC1-201ENST00000318607 HMGB1P09429 215 aaKnown RBP16.25■□□□□ 0.19
PABPC1-201ENST00000318607 FMR1Q06787 632 aaKnown RBP eCLIP16.25■□□□□ 0.191e-11■■■■■ 56.2
PABPC1-201ENST00000318607 FOXP4Q8IVH2 680 aaPredicted RBP16.25■□□□□ 0.19
PABPC1-201ENST00000318607 GOLGA1Q92805 767 aa16.25■□□□□ 0.19
PABPC1-201ENST00000318607 PCMTD1Q96MG8 357 aaPredicted RBP16.25■□□□□ 0.19
PABPC1-201ENST00000318607 RTEL1Q9NZ71 1219 aa16.25■□□□□ 0.19
PABPC1-201ENST00000318607 NR5A1Q13285 461 aa16.25■□□□□ 0.19
PABPC1-201ENST00000318607 NCAPH2Q6IBW4 605 aa16.25■□□□□ 0.19
PABPC1-201ENST00000318607 TMED8Q6PL24 325 aaPredicted RBP16.25■□□□□ 0.19
PABPC1-201ENST00000318607 CPLX2Q6PUV4 134 aaKnown RBP16.25■□□□□ 0.19
PABPC1-201ENST00000318607 SHC4Q6S5L8 630 aa16.25■□□□□ 0.19
PABPC1-201ENST00000318607 SMARCC2Q8TAQ2 1214 aa16.25■□□□□ 0.19
PABPC1-201ENST00000318607 NKX2-3Q8TAU0 364 aa16.25■□□□□ 0.19
PABPC1-201ENST00000318607 FAM89AQ96GI7 184 aa16.25■□□□□ 0.19
PABPC1-201ENST00000318607 IMPACTQ9P2X3 320 aa16.25■□□□□ 0.19
PABPC1-201ENST00000318607 AXIN2Q9Y2T1 843 aa16.25■□□□□ 0.19
PABPC1-201ENST00000318607 KIF5CO60282 957 aa16.24■□□□□ 0.19
PABPC1-201ENST00000318607 IARSP41252 1262 aaKnown RBP16.24■□□□□ 0.19
PABPC1-201ENST00000318607 REXO1L1PQ8IX06 675 aa16.24■□□□□ 0.19
PABPC1-201ENST00000318607 SLF1Q9BQI6 1058 aa16.24■□□□□ 0.19
PABPC1-201ENST00000318607 STRCP1A6NGW2 1772 aa16.24■□□□□ 0.19
PABPC1-201ENST00000318607 PSDA5PKW4 1024 aaPredicted RBP16.24■□□□□ 0.19
PABPC1-201ENST00000318607 GOLGA8AA7E2F4 631 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms