RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 FAM177A1Q8N128 213 aaPredicted RBP5.45□□□□□ -1.54
PTPN13-201ENST00000316707 TC2NQ8N9U0 490 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 NOP2P46087 812 aaKnown RBP5.44□□□□□ -1.54
PTPN13-201ENST00000316707 CASP8Q14790 479 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 DBNDD2Q9BQY9 259 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 PAG1Q9NWQ8 432 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 SLIT1O75093 1534 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 PRC1O43663 620 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 TTLL5Q6EMB2 1281 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 STOX1Q6ZVD7 989 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 ZNF579Q8NAF0 562 aaKnown RBP5.44□□□□□ -1.54
PTPN13-201ENST00000316707 AFAP1L1Q8TED9 768 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 DHX58Q96C10 678 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 LTV1Q96GA3 475 aaPredicted RBP5.44□□□□□ -1.54
PTPN13-201ENST00000316707 TAF6LQ9Y6J9 622 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 TNRQ92752 1358 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 SHTN1A0MZ66 631 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 EIF3CLB5ME19 914 aaKnown RBP5.44□□□□□ -1.54
PTPN13-201ENST00000316707 ZNF18P17022 549 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 AARSP49588 968 aaKnown RBP eCLIP5.44□□□□□ -1.54
PTPN13-201ENST00000316707 KRT40Q6A162 431 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 MCTP2Q6DN12 878 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 KAZALD1Q96I82 304 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 EIF3CQ99613 913 aaKnown RBP5.44□□□□□ -1.54
PTPN13-201ENST00000316707 CHD1O14646 1710 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 HEG1Q9ULI3 1381 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 WDR17Q8IZU2 1322 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 RNMTO43148 476 aaKnown RBP5.44□□□□□ -1.54
PTPN13-201ENST00000316707 IARSP41252 1262 aaKnown RBP5.44□□□□□ -1.54
PTPN13-201ENST00000316707 DDX46Q7L014 1031 aaKnown RBP5.44□□□□□ -1.54
PTPN13-201ENST00000316707 TRIM22Q8IYM9 498 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 LRRC2Q9BYS8 371 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 WWC3Q9ULE0 1092 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 ST5P78524 1137 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 ILDR1Q86SU0 546 aaPredicted RBP5.44□□□□□ -1.54
PTPN13-201ENST00000316707 TADA2BQ86TJ2 420 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 RUBCNQ92622 972 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 KIFC2Q96AC6 838 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 TMEM87BQ96K49 555 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 TLR7Q9NYK1 1049 aaKnown RBP5.44□□□□□ -1.54
PTPN13-201ENST00000316707 A0A1B0GTH6 734 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 CCDC196A0A1B0GTZ2 297 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 TARSL2A2RTX5 802 aaKnown RBP5.44□□□□□ -1.54
PTPN13-201ENST00000316707 PTPN12Q05209 780 aaKnown RBP5.44□□□□□ -1.54
PTPN13-201ENST00000316707 SPATA1Q5VX52 437 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 RESP18Q5W5W9 173 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 ANKRD13DQ6ZTN6 518 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 VPS37DQ86XT2 251 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 ABTB2Q8N961 1025 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 NCOA5Q9HCD5 579 aaKnown RBP5.44□□□□□ -1.54
PTPN13-201ENST00000316707 CEP126Q9P2H0 1117 aa5.44□□□□□ -1.54
PTPN13-201ENST00000316707 ABCC12Q96J65 1359 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 NEDD4P46934 1319 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 NEURL1BA8MQ27 555 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 GUCY1B3Q02153 619 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 PPFIA1Q13136 1202 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 PPP2R5BQ15173 497 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 LRRN4CLQ8ND94 238 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 ALG1Q9BT22 464 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 AKAP2Q9Y2D5 859 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 TRIM66O15016 1216 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 ANXA1P04083 346 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 NT5DC1Q5TFE4 455 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 RASGRP2Q7LDG7 609 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 IGSF22Q8N9C0 903 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 IQCDQ96DY2 449 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 NEUROD6Q96NK8 337 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 GSDMAQ96QA5 445 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 ABCB6Q9NP58 842 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 FAN1Q9Y2M0 1017 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 CLIC4Q9Y696 253 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 DTNBO60941 627 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 IFIT1P09914 478 aaKnown RBP5.43□□□□□ -1.54
PTPN13-201ENST00000316707 FECHP22830 423 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 TFCP2Q12800 502 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.43□□□□□ -1.54
PTPN13-201ENST00000316707 ANO9A1A5B4 782 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 H3BQF6 201 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 GOLIM4O00461 696 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 IGKV5-2P06315 115 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 ATP2B1P20020 1258 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 RFX5P48382 616 aaPredicted RBP5.43□□□□□ -1.54
PTPN13-201ENST00000316707 PLCD1P51178 756 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 RCAN1P53805 252 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 APBA1Q02410 837 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 TTC39AQ5SRH9 613 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 MICALCLQ6ZW33 695 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 PLCD3Q8N3E9 789 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 DPF2Q92785 391 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 CLGNO14967 610 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 OPA1O60313 960 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 KRT83P78385 493 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 NBPF14Q5TI25 921 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 FAM76AQ8TAV0 307 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 ANGEL1Q9UNK9 670 aaKnown RBP5.43□□□□□ -1.54
PTPN13-201ENST00000316707 ITIH6Q6UXX5 1313 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 CLSTN1O94985 981 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 PTPREP23469 700 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 FOSBP53539 338 aa5.43□□□□□ -1.54
PTPN13-201ENST00000316707 SEMA3FQ13275 785 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms