RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 ANTXR1Q9H6X2 564 aa5.95□□□□□ -1.46
SMCO3-201ENST00000316048 JPH1Q9HDC5 661 aaPredicted RBP5.95□□□□□ -1.46
SMCO3-201ENST00000316048 MBIPQ9NS73 344 aa5.95□□□□□ -1.46
SMCO3-201ENST00000316048 SNTG2Q9NY99 539 aa5.95□□□□□ -1.46
SMCO3-201ENST00000316048 FRRS1LQ9P0K9 344 aa5.95□□□□□ -1.46
SMCO3-201ENST00000316048 IGF1RP08069 1367 aa5.94□□□□□ -1.46
SMCO3-201ENST00000316048 H3BRJ5 948 aa5.94□□□□□ -1.46
SMCO3-201ENST00000316048 LINC01387J3KSC0 135 aa5.94□□□□□ -1.46
SMCO3-201ENST00000316048 GSTP1P09211 210 aaKnown RBP5.94□□□□□ -1.46
SMCO3-201ENST00000316048 HSP90B1P14625 803 aaKnown RBP5.94□□□□□ -1.46
SMCO3-201ENST00000316048 TCEAL1Q15170 157 aa5.94□□□□□ -1.46
SMCO3-201ENST00000316048 RUFY4Q6ZNE9 571 aa5.94□□□□□ -1.46
SMCO3-201ENST00000316048 CCDC84Q86UT8 332 aaPredicted RBP5.94□□□□□ -1.46
SMCO3-201ENST00000316048 LSRQ86X29 649 aaPredicted RBP5.94□□□□□ -1.46
SMCO3-201ENST00000316048 IL22RA1Q8N6P7 574 aa5.94□□□□□ -1.46
SMCO3-201ENST00000316048 MICAL1Q8TDZ2 1067 aa5.94□□□□□ -1.46
SMCO3-201ENST00000316048 KCNB2Q92953 911 aa5.94□□□□□ -1.46
SMCO3-201ENST00000316048 SRPK1Q96SB4 655 aaKnown RBP5.94□□□□□ -1.46
SMCO3-201ENST00000316048 NRSN2Q9GZP1 204 aa5.94□□□□□ -1.46
SMCO3-201ENST00000316048 TNKS2Q9H2K2 1166 aa5.94□□□□□ -1.46
SMCO3-201ENST00000316048 KANSL2Q9H9L4 492 aa5.94□□□□□ -1.46
SMCO3-201ENST00000316048 ST7Q9NRC1 585 aa5.94□□□□□ -1.46
SMCO3-201ENST00000316048 SAMM50Q9Y512 469 aa5.94□□□□□ -1.46
SMCO3-201ENST00000316048 RGS9O75916 674 aaPredicted RBP5.93□□□□□ -1.46
SMCO3-201ENST00000316048 GIPRP48546 466 aa5.93□□□□□ -1.46
SMCO3-201ENST00000316048 EIF6P56537 245 aaKnown RBP5.93□□□□□ -1.46
SMCO3-201ENST00000316048 NBPF6Q5VWK0 638 aa5.93□□□□□ -1.46
SMCO3-201ENST00000316048 GPBAR1Q8TDU6 330 aa5.93□□□□□ -1.46
SMCO3-201ENST00000316048 NBPF4Q96M43 638 aa5.93□□□□□ -1.46
SMCO3-201ENST00000316048 ZNRF3Q9ULT6 936 aa5.93□□□□□ -1.46
SMCO3-201ENST00000316048 PCDHB14Q9Y5E9 798 aa5.93□□□□□ -1.46
SMCO3-201ENST00000316048 ANKRD62A6NC57 917 aa5.93□□□□□ -1.46
SMCO3-201ENST00000316048 BPNT1O95861 308 aa5.93□□□□□ -1.46
SMCO3-201ENST00000316048 C20orf204Q6ZNR8 217 aa5.93□□□□□ -1.46
SMCO3-201ENST00000316048 MRFAP1L1Q96HT8 127 aa5.93□□□□□ -1.46
SMCO3-201ENST00000316048 COL25A1Q9BXS0 654 aaPredicted RBP5.93□□□□□ -1.46
SMCO3-201ENST00000316048 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.93□□□□□ -1.46
SMCO3-201ENST00000316048 CORINQ9Y5Q5 1042 aa5.93□□□□□ -1.46
SMCO3-201ENST00000316048 ROBO2Q9HCK4 1378 aa5.93□□□□□ -1.46
SMCO3-201ENST00000316048 ERBB4Q15303 1308 aa5.92□□□□□ -1.46
SMCO3-201ENST00000316048 AFF1P51825 1210 aaKnown RBP5.92□□□□□ -1.46
SMCO3-201ENST00000316048 KRT76Q01546 638 aa5.92□□□□□ -1.46
SMCO3-201ENST00000316048 RPL6Q02878 288 aaKnown RBP5.92□□□□□ -1.46
SMCO3-201ENST00000316048 INPP5AQ14642 412 aa5.92□□□□□ -1.46
SMCO3-201ENST00000316048 LRRC14Q15048 493 aa5.92□□□□□ -1.46
SMCO3-201ENST00000316048 NFE2L2Q16236 605 aa5.92□□□□□ -1.46
SMCO3-201ENST00000316048 WDR89Q96FK6 387 aaPredicted RBP5.92□□□□□ -1.46
SMCO3-201ENST00000316048 DEPDC7Q96QD5 511 aa5.92□□□□□ -1.46
SMCO3-201ENST00000316048 NXF1Q9UBU9 619 aaKnown RBP5.92□□□□□ -1.46
SMCO3-201ENST00000316048 ZNF165P49910 485 aa5.92□□□□□ -1.46
SMCO3-201ENST00000316048 CABP4P57796 275 aa5.92□□□□□ -1.46
SMCO3-201ENST00000316048 EGFLAMQ63HQ2 1017 aa5.92□□□□□ -1.46
SMCO3-201ENST00000316048 CCDC86Q9H6F5 360 aaKnown RBP5.92□□□□□ -1.46
SMCO3-201ENST00000316048 SBNO2Q9Y2G9 1366 aa5.91□□□□□ -1.46
SMCO3-201ENST00000316048 B2RBV5 119 aa5.91□□□□□ -1.46
SMCO3-201ENST00000316048 H3BM21 787 aa5.91□□□□□ -1.46
SMCO3-201ENST00000316048 TRIM37O94972 964 aa5.91□□□□□ -1.46
SMCO3-201ENST00000316048 EPXP11678 715 aa5.91□□□□□ -1.46
SMCO3-201ENST00000316048 MAP2K3P46734 347 aa5.91□□□□□ -1.46
SMCO3-201ENST00000316048 WIPI1Q5MNZ9 446 aaPredicted RBP5.91□□□□□ -1.46
SMCO3-201ENST00000316048 SLCO4C1Q6ZQN7 724 aa5.91□□□□□ -1.46
SMCO3-201ENST00000316048 PLPPR2Q96GM1 343 aa5.91□□□□□ -1.46
SMCO3-201ENST00000316048 EMILIN2Q9BXX0 1053 aa5.91□□□□□ -1.46
SMCO3-201ENST00000316048 CACNA2D2Q9NY47 1150 aa5.91□□□□□ -1.46
SMCO3-201ENST00000316048 SIRPGQ9P1W8 387 aa5.91□□□□□ -1.46
SMCO3-201ENST00000316048 PCDHA4Q9UN74 947 aa5.91□□□□□ -1.46
SMCO3-201ENST00000316048 FAM177BA6PVY3 158 aa5.9□□□□□ -1.46
SMCO3-201ENST00000316048 M0R082 166 aa5.9□□□□□ -1.46
SMCO3-201ENST00000316048 TM4SF5O14894 197 aa5.9□□□□□ -1.46
SMCO3-201ENST00000316048 U2SURPO15042 1029 aaKnown RBP5.9□□□□□ -1.46
SMCO3-201ENST00000316048 DNAJA2O60884 412 aa5.9□□□□□ -1.46
SMCO3-201ENST00000316048 MAOBP27338 520 aa5.9□□□□□ -1.46
SMCO3-201ENST00000316048 CANXP27824 592 aaKnown RBP5.9□□□□□ -1.46
SMCO3-201ENST00000316048 AP3B2Q13367 1082 aa5.9□□□□□ -1.46
SMCO3-201ENST00000316048 LARP1BQ659C4 914 aaKnown RBP5.9□□□□□ -1.46
SMCO3-201ENST00000316048 LRFN4Q6PJG9 635 aa5.9□□□□□ -1.46
SMCO3-201ENST00000316048 REXO1Q8N1G1 1221 aaKnown RBP5.9□□□□□ -1.46
SMCO3-201ENST00000316048 ZNF417Q8TAU3 575 aa5.9□□□□□ -1.46
SMCO3-201ENST00000316048 TTC9Q92623 222 aa5.9□□□□□ -1.46
SMCO3-201ENST00000316048 ACSBG1Q96GR2 724 aa5.9□□□□□ -1.46
SMCO3-201ENST00000316048 RNPC3Q96LT9 517 aaKnown RBP5.9□□□□□ -1.46
SMCO3-201ENST00000316048 ZNF587Q96SQ5 575 aaPredicted RBP5.9□□□□□ -1.46
SMCO3-201ENST00000316048 ACTR10Q9NZ32 417 aa5.9□□□□□ -1.46
SMCO3-201ENST00000316048 R3HCC1Q9Y3T6 440 aaKnown RBP5.9□□□□□ -1.46
SMCO3-201ENST00000316048 PPME1Q9Y570 386 aa5.9□□□□□ -1.46
SMCO3-201ENST00000316048 RB1CC1Q8TDY2 1594 aa5.9□□□□□ -1.46
SMCO3-201ENST00000316048 FSCN2O14926 492 aa5.9□□□□□ -1.47
SMCO3-201ENST00000316048 PPM1GO15355 546 aaPredicted RBP5.9□□□□□ -1.47
SMCO3-201ENST00000316048 ZNF862O60290 1169 aa5.9□□□□□ -1.47
SMCO3-201ENST00000316048 NLRP12P59046 1061 aa5.9□□□□□ -1.47
SMCO3-201ENST00000316048 PPP2R5EQ16537 467 aa5.9□□□□□ -1.47
SMCO3-201ENST00000316048 DDR2Q16832 855 aa5.9□□□□□ -1.47
SMCO3-201ENST00000316048 GALNT11Q8NCW6 608 aa5.9□□□□□ -1.47
SMCO3-201ENST00000316048 ACDQ96AP0 544 aa5.9□□□□□ -1.47
SMCO3-201ENST00000316048 KLHDC7BQ96G42 594 aa5.9□□□□□ -1.47
SMCO3-201ENST00000316048 MAPK8IP1Q9UQF2 711 aa5.9□□□□□ -1.47
SMCO3-201ENST00000316048 SCRIBQ14160 1630 aa5.89□□□□□ -1.47
SMCO3-201ENST00000316048 GFRA2O00451 464 aa5.89□□□□□ -1.47
SMCO3-201ENST00000316048 DDX3YO15523 660 aaKnown RBP5.89□□□□□ -1.47
SMCO3-201ENST00000316048 DLGAP3O95886 979 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms