RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 WDR33Q9C0J8 1336 aaKnown RBP11.02□□□□□ -0.65
RBFOX1-201ENST00000311745 TAF1LQ8IZX4 1826 aa11.02□□□□□ -0.65
RBFOX1-201ENST00000311745 ATRNO75882 1429 aa11.02□□□□□ -0.65
RBFOX1-201ENST00000311745 KLHL33A6NCF5 533 aa11.02□□□□□ -0.65
RBFOX1-201ENST00000311745 EXOSC10Q01780 885 aaKnown RBP11.02□□□□□ -0.65
RBFOX1-201ENST00000311745 MCMDC2Q4G0Z9 681 aa11.02□□□□□ -0.65
RBFOX1-201ENST00000311745 TTLL11Q8NHH1 800 aa11.02□□□□□ -0.65
RBFOX1-201ENST00000311745 CTDNEP1O95476 244 aa11.01□□□□□ -0.65
RBFOX1-201ENST00000311745 TPM1P09493 284 aa11.01□□□□□ -0.65
RBFOX1-201ENST00000311745 THOC1Q96FV9 657 aaKnown RBP11.01□□□□□ -0.65
RBFOX1-201ENST00000311745 FUCA2Q9BTY2 467 aa11.01□□□□□ -0.65
RBFOX1-201ENST00000311745 NBPF3Q9H094 633 aa11.01□□□□□ -0.65
RBFOX1-201ENST00000311745 THSD7AQ9UPZ6 1657 aa11.01□□□□□ -0.65
RBFOX1-201ENST00000311745 MAGEA9P43362 315 aa11.01□□□□□ -0.65
RBFOX1-201ENST00000311745 ZNF34Q8IZ26 560 aa11.01□□□□□ -0.65
RBFOX1-201ENST00000311745 OSBP2Q969R2 916 aa11.01□□□□□ -0.65
RBFOX1-201ENST00000311745 GREM2Q9H772 168 aa11.01□□□□□ -0.65
RBFOX1-201ENST00000311745 SH2B1Q9NRF2 756 aaPredicted RBP11.01□□□□□ -0.65
RBFOX1-201ENST00000311745 HMG20BQ9P0W2 317 aa11.01□□□□□ -0.65
RBFOX1-201ENST00000311745 SBF2Q86WG5 1849 aa11.01□□□□□ -0.65
RBFOX1-201ENST00000311745 SALL1Q9NSC2 1324 aa11.01□□□□□ -0.65
RBFOX1-201ENST00000311745 SMTNL1A8MU46 457 aa11.01□□□□□ -0.65
RBFOX1-201ENST00000311745 TPM4P67936 248 aa11.01□□□□□ -0.65
RBFOX1-201ENST00000311745 PI16Q6UXB8 463 aa11.01□□□□□ -0.65
RBFOX1-201ENST00000311745 CDC37L1Q7L3B6 337 aa11.01□□□□□ -0.65
RBFOX1-201ENST00000311745 KIAA1524Q8TCG1 905 aa11.01□□□□□ -0.65
RBFOX1-201ENST00000311745 CCDC196A0A1B0GTZ2 297 aa11□□□□□ -0.65
RBFOX1-201ENST00000311745 ZSCAN31Q96LW9 406 aaPredicted RBP11□□□□□ -0.65
RBFOX1-201ENST00000311745 PICK1Q9NRD5 415 aa11□□□□□ -0.65
RBFOX1-201ENST00000311745 ZNF215Q9UL58 517 aaPredicted RBP11□□□□□ -0.65
RBFOX1-201ENST00000311745 MAFGO15525 162 aa11□□□□□ -0.65
RBFOX1-201ENST00000311745 HSPD1P10809 573 aaKnown RBP11□□□□□ -0.65
RBFOX1-201ENST00000311745 AP1ARQ63HQ0 302 aa11□□□□□ -0.65
RBFOX1-201ENST00000311745 TMTC2Q8N394 836 aa11□□□□□ -0.65
RBFOX1-201ENST00000311745 XAGE2Q96GT9 111 aa11□□□□□ -0.65
RBFOX1-201ENST00000311745 HELLSQ9NRZ9 838 aa11□□□□□ -0.65
RBFOX1-201ENST00000311745 LY75O60449 1722 aa11□□□□□ -0.65
RBFOX1-201ENST00000311745 BTAF1O14981 1849 aa11□□□□□ -0.65
RBFOX1-201ENST00000311745 ABCC12Q96J65 1359 aa11□□□□□ -0.65
RBFOX1-201ENST00000311745 SMC2O95347 1197 aa10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 ECEL1O95672 775 aa10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 PAX7P23759 505 aa10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 MARCH10Q8NA82 808 aaPredicted RBP10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 MMS22LQ6ZRQ5 1243 aa10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 MICALL1Q8N3F8 863 aa10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 DSCC1Q9BVC3 393 aa10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 CACNA1SQ13698 1873 aa10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 EIF3CLB5ME19 914 aaKnown RBP10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 KIF3CO14782 793 aa10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 JAK2O60674 1132 aa10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 EIF5P55010 431 aaKnown RBP10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 DNM1Q05193 864 aaKnown RBP10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 ITPK1Q13572 414 aa10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 TPD52L1Q16890 204 aaPredicted RBP10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 CCDC96Q2M329 555 aa10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 SMARCC2Q8TAQ2 1214 aa10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 PPM1EQ8WY54 764 aa10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 EIF3CQ99613 913 aaKnown RBP10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 TEX13AQ9BXU3 409 aaPredicted RBP10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 BSDC1Q9NW68 430 aaPredicted RBP10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.99□□□□□ -0.65
RBFOX1-201ENST00000311745 FGFR2P21802 821 aa10.98□□□□□ -0.65
RBFOX1-201ENST00000311745 MCAMP43121 646 aa10.98□□□□□ -0.65
RBFOX1-201ENST00000311745 CCDC85AQ96PX6 553 aaPredicted RBP10.98□□□□□ -0.65
RBFOX1-201ENST00000311745 CHMP3Q9Y3E7 222 aa10.98□□□□□ -0.65
RBFOX1-201ENST00000311745 NHSQ6T4R5 1651 aa10.98□□□□□ -0.65
RBFOX1-201ENST00000311745 EP400Q96L91 3159 aa10.98□□□□□ -0.65
RBFOX1-201ENST00000311745 ADD1P35611 737 aaKnown RBP10.98□□□□□ -0.65
RBFOX1-201ENST00000311745 CTSWP56202 376 aa10.98□□□□□ -0.65
RBFOX1-201ENST00000311745 SCRN1Q12765 414 aa10.98□□□□□ -0.65
RBFOX1-201ENST00000311745 DHX8Q14562 1220 aaKnown RBP10.98□□□□□ -0.65
RBFOX1-201ENST00000311745 BLOC1S2Q6QNY1 142 aa10.98□□□□□ -0.65
RBFOX1-201ENST00000311745 LEKR1Q6ZMV7 388 aa10.98□□□□□ -0.65
RBFOX1-201ENST00000311745 SPATA31A5Q5VU36 1347 aa10.98□□□□□ -0.65
RBFOX1-201ENST00000311745 SPATA31A7Q8IWB4 1347 aa10.98□□□□□ -0.65
RBFOX1-201ENST00000311745 RNF113AO15541 343 aaKnown RBP10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 Q6ZUG5 572 aa10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 DRC7Q8IY82 874 aa10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 FBXL16Q8N461 479 aa10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 FBXO18Q8NFZ0 1043 aa10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 SMC3Q9UQE7 1217 aa10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 TACC3Q9Y6A5 838 aa10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 U3KPZ7 1027 aaPredicted RBP10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 DLEC1Q9Y238 1755 aa10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 TCRBV5S4A2TA0A5A2 114 aa10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 ERVV-1B6SEH8 477 aa10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 ZKSCAN1P17029 563 aaPredicted RBP10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 GPTP24298 496 aa10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 AK7Q96M32 723 aa10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 NEUROD6Q96NK8 337 aa10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 NEK1Q96PY6 1258 aa10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 PUS7LQ9H0K6 701 aaKnown RBP10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 G3BP2Q9UN86 482 aaKnown RBP10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 TNRC6CQ9HCJ0 1690 aaKnown RBP10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 ITGA6P23229 1130 aa10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 EVCP57679 992 aa10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 FAM173BQ6P4H8 233 aa10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 ZNF512BQ96KM6 892 aaPredicted RBP10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 LRRC2Q9BYS8 371 aa10.97□□□□□ -0.65
RBFOX1-201ENST00000311745 KAT6BQ8WYB5 2073 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms