RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 CTCFLQ8NI51 663 aaPredicted RBP12.31□□□□□ -0.44
MUC4-201ENST00000308466 PCMTD1Q96MG8 357 aaPredicted RBP12.31□□□□□ -0.44
MUC4-201ENST00000308466 CNNM2Q9H8M5 875 aa12.31□□□□□ -0.44
MUC4-201ENST00000308466 ANKIB1Q9P2G1 1089 aa12.31□□□□□ -0.44
MUC4-201ENST00000308466 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.31□□□□□ -0.44
MUC4-201ENST00000308466 V9GYY5 206 aaPredicted RBP12.31□□□□□ -0.44
MUC4-201ENST00000308466 MED23Q9ULK4 1368 aa12.3□□□□□ -0.44
MUC4-201ENST00000308466 RGPD8O14715 1765 aaPredicted RBP12.3□□□□□ -0.44
MUC4-201ENST00000308466 TOP1P11387 765 aaKnown RBP12.3□□□□□ -0.44
MUC4-201ENST00000308466 NDUFA8P51970 172 aa12.3□□□□□ -0.44
MUC4-201ENST00000308466 ANKRD20A12PQ8NF67 263 aa12.3□□□□□ -0.44
MUC4-201ENST00000308466 ESR2Q92731 530 aa12.3□□□□□ -0.44
MUC4-201ENST00000308466 RCOR1Q9UKL0 485 aa12.3□□□□□ -0.44
MUC4-201ENST00000308466 MEGF6O75095 1541 aa12.3□□□□□ -0.44
MUC4-201ENST00000308466 CBFA2T2O43439 604 aa12.3□□□□□ -0.44
MUC4-201ENST00000308466 AFMP43652 599 aa12.3□□□□□ -0.44
MUC4-201ENST00000308466 GTF2A1P52655 376 aaPredicted RBP12.3□□□□□ -0.44
MUC4-201ENST00000308466 UBASH3AP57075 661 aa12.3□□□□□ -0.44
MUC4-201ENST00000308466 DZIP1Q86YF9 867 aaKnown RBP12.3□□□□□ -0.44
MUC4-201ENST00000308466 CPLX3Q8WVH0 158 aa12.3□□□□□ -0.44
MUC4-201ENST00000308466 AKAP12Q02952 1782 aa12.3□□□□□ -0.44
MUC4-201ENST00000308466 KDM6AO15550 1401 aaPredicted RBP12.3□□□□□ -0.44
MUC4-201ENST00000308466 MAGEB6P1A0A0J9YX57 407 aa12.3□□□□□ -0.44
MUC4-201ENST00000308466 USP5P45974 858 aa12.3□□□□□ -0.44
MUC4-201ENST00000308466 TSGA10IPQ3SY00 556 aa12.3□□□□□ -0.44
MUC4-201ENST00000308466 USPL1Q5W0Q7 1092 aa12.3□□□□□ -0.44
MUC4-201ENST00000308466 CEP135Q66GS9 1140 aa12.3□□□□□ -0.44
MUC4-201ENST00000308466 ADALQ6DHV7 355 aa12.3□□□□□ -0.44
MUC4-201ENST00000308466 KIF18AQ8NI77 898 aa12.3□□□□□ -0.44
MUC4-201ENST00000308466 CARMIL3Q8ND23 1372 aa12.3□□□□□ -0.44
MUC4-201ENST00000308466 TNS3Q68CZ2 1445 aa12.29□□□□□ -0.44
MUC4-201ENST00000308466 TSR1Q2NL82 804 aaKnown RBP12.29□□□□□ -0.44
MUC4-201ENST00000308466 C11orf57Q6ZUT1 292 aaPredicted RBP12.29□□□□□ -0.44
MUC4-201ENST00000308466 TMEM87BQ96K49 555 aa12.29□□□□□ -0.44
MUC4-201ENST00000308466 ISCA1Q9BUE6 129 aa12.29□□□□□ -0.44
MUC4-201ENST00000308466 MKNK2Q9HBH9 465 aa12.29□□□□□ -0.44
MUC4-201ENST00000308466 PIH1D3Q9NQM4 214 aaKnown RBP12.29□□□□□ -0.44
MUC4-201ENST00000308466 CCDC87Q9NVE4 849 aa12.29□□□□□ -0.44
MUC4-201ENST00000308466 TSPY2A6NKD2 308 aa12.29□□□□□ -0.44
MUC4-201ENST00000308466 NLRP5P59047 1200 aa12.29□□□□□ -0.44
MUC4-201ENST00000308466 IFIT1BQ5T764 474 aaKnown RBP12.29□□□□□ -0.44
MUC4-201ENST00000308466 NBPF5PQ86XG9 351 aaPredicted RBP12.29□□□□□ -0.44
MUC4-201ENST00000308466 IFNL3Q8IZI9 196 aa12.29□□□□□ -0.44
MUC4-201ENST00000308466 SDR42E1Q8WUS8 393 aa12.29□□□□□ -0.44
MUC4-201ENST00000308466 CEP131Q9UPN4 1083 aa12.29□□□□□ -0.44
MUC4-201ENST00000308466 RIOK3O14730 519 aaKnown RBP12.29□□□□□ -0.44
MUC4-201ENST00000308466 DIS3L2Q8IYB7 885 aaKnown RBP12.29□□□□□ -0.44
MUC4-201ENST00000308466 CABP5Q9NP86 173 aa12.29□□□□□ -0.44
MUC4-201ENST00000308466 PIK3C2AO00443 1686 aa12.29□□□□□ -0.44
MUC4-201ENST00000308466 PRKAB2O43741 272 aa12.28□□□□□ -0.44
MUC4-201ENST00000308466 NEMFO60524 1076 aa12.28□□□□□ -0.44
MUC4-201ENST00000308466 ADD2P35612 726 aa12.28□□□□□ -0.44
MUC4-201ENST00000308466 GYG1P46976 350 aa12.28□□□□□ -0.44
MUC4-201ENST00000308466 GSDMDP57764 484 aa12.28□□□□□ -0.44
MUC4-201ENST00000308466 TMX4Q9H1E5 349 aaPredicted RBP12.28□□□□□ -0.44
MUC4-201ENST00000308466 FBXO3Q9UK99 471 aa12.28□□□□□ -0.44
MUC4-201ENST00000308466 FILIP1LQ4L180 1135 aa12.28□□□□□ -0.44
MUC4-201ENST00000308466 TEX2Q8IWB9 1127 aa12.28□□□□□ -0.44
MUC4-201ENST00000308466 SMARCE1Q969G3 411 aa12.28□□□□□ -0.44
MUC4-201ENST00000308466 CLIC6Q96NY7 704 aa12.28□□□□□ -0.44
MUC4-201ENST00000308466 DACH1Q9UI36 760 aa12.28□□□□□ -0.44
MUC4-201ENST00000308466 MYCNP04198 464 aaPredicted RBP12.28□□□□□ -0.44
MUC4-201ENST00000308466 MEX3CQ5U5Q3 659 aaKnown RBP12.28□□□□□ -0.44
MUC4-201ENST00000308466 TMTC2Q8N394 836 aa12.28□□□□□ -0.44
MUC4-201ENST00000308466 KCNB2Q92953 911 aa12.28□□□□□ -0.44
MUC4-201ENST00000308466 NLRP3Q96P20 1036 aa12.28□□□□□ -0.44
MUC4-201ENST00000308466 KIAA1468Q9P260 1216 aa12.28□□□□□ -0.44
MUC4-201ENST00000308466 ATP2B2Q01814 1243 aa12.27□□□□□ -0.44
MUC4-201ENST00000308466 AKNAD1Q5T1N1 836 aa12.27□□□□□ -0.44
MUC4-201ENST00000308466 PPFIBP1Q86W92 1011 aa12.27□□□□□ -0.44
MUC4-201ENST00000308466 MYRIPQ8NFW9 859 aa12.27□□□□□ -0.44
MUC4-201ENST00000308466 BCL2L12Q9HB09 334 aa12.27□□□□□ -0.44
MUC4-201ENST00000308466 URI1O94763 535 aaPredicted RBP12.27□□□□□ -0.45
MUC4-201ENST00000308466 PFKFB1P16118 471 aa12.27□□□□□ -0.45
MUC4-201ENST00000308466 TXLNAP40222 546 aa12.27□□□□□ -0.45
MUC4-201ENST00000308466 APOA5Q6Q788 366 aa12.27□□□□□ -0.45
MUC4-201ENST00000308466 DHX58Q96C10 678 aa12.27□□□□□ -0.45
MUC4-201ENST00000308466 TFCP2L1Q9NZI6 479 aa12.27□□□□□ -0.45
MUC4-201ENST00000308466 BTBD18B2RXH4 712 aa12.27□□□□□ -0.45
MUC4-201ENST00000308466 YEATS4O95619 227 aa12.27□□□□□ -0.45
MUC4-201ENST00000308466 SNW1Q13573 536 aaKnown RBP12.27□□□□□ -0.45
MUC4-201ENST00000308466 DHX8Q14562 1220 aaKnown RBP12.27□□□□□ -0.45
MUC4-201ENST00000308466 SKIDA1Q1XH10 827 aa12.27□□□□□ -0.45
MUC4-201ENST00000308466 SETDB2Q96T68 719 aa12.27□□□□□ -0.45
MUC4-201ENST00000308466 MROH5Q6ZUA9 1318 aa12.27□□□□□ -0.45
MUC4-201ENST00000308466 STX8Q9UNK0 236 aa12.26□□□□□ -0.45
MUC4-201ENST00000308466 GNAT2P19087 354 aa12.26□□□□□ -0.45
MUC4-201ENST00000308466 STX17P56962 302 aa12.26□□□□□ -0.45
MUC4-201ENST00000308466 UBE3CQ15386 1083 aa12.26□□□□□ -0.45
MUC4-201ENST00000308466 LINC00301Q8NCQ3 95 aa12.26□□□□□ -0.45
MUC4-201ENST00000308466 KCNH3Q9ULD8 1083 aa12.26□□□□□ -0.45
MUC4-201ENST00000308466 V9GY48 417 aaPredicted RBP12.26□□□□□ -0.45
MUC4-201ENST00000308466 FAM193AP78312 1265 aa12.26□□□□□ -0.45
MUC4-201ENST00000308466 EXOSC10Q01780 885 aaKnown RBP12.26□□□□□ -0.45
MUC4-201ENST00000308466 SUSD4Q5VX71 490 aa12.26□□□□□ -0.45
MUC4-201ENST00000308466 C10orf67Q8IYJ2 551 aa12.26□□□□□ -0.45
MUC4-201ENST00000308466 KRI1Q8N9T8 703 aaKnown RBP12.26□□□□□ -0.45
MUC4-201ENST00000308466 KIAA1524Q8TCG1 905 aa12.26□□□□□ -0.45
MUC4-201ENST00000308466 CACTINQ8WUQ7 758 aaKnown RBP12.26□□□□□ -0.45
MUC4-201ENST00000308466 RTEL1Q9NZ71 1219 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms