RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 CTGFP29279 349 aa12.79□□□□□ -0.36
COL4A3-201ENST00000304990 CASP7P55210 303 aa12.79□□□□□ -0.36
COL4A3-201ENST00000304990 PRKCZQ05513 592 aa12.79□□□□□ -0.36
COL4A3-201ENST00000304990 PPATQ06203 517 aa12.79□□□□□ -0.36
COL4A3-201ENST00000304990 FLIIQ13045 1269 aa12.79□□□□□ -0.36
COL4A3-201ENST00000304990 ANKRD23Q86SG2 305 aa12.79□□□□□ -0.36
COL4A3-201ENST00000304990 TSR2Q969E8 191 aaKnown RBP12.79□□□□□ -0.36
COL4A3-201ENST00000304990 TEKT1Q969V4 418 aa12.79□□□□□ -0.36
COL4A3-201ENST00000304990 ZNF341Q9BYN7 854 aa12.79□□□□□ -0.36
COL4A3-201ENST00000304990 UNC93B1Q9H1C4 597 aa12.79□□□□□ -0.36
COL4A3-201ENST00000304990 PRO3102Q9H379 93 aa12.79□□□□□ -0.36
COL4A3-201ENST00000304990 SGPL1O95470 568 aa12.78□□□□□ -0.36
COL4A3-201ENST00000304990 LMBR1LQ6UX01 489 aa12.78□□□□□ -0.36
COL4A3-201ENST00000304990 MIGA2Q7L4E1 593 aa12.78□□□□□ -0.36
COL4A3-201ENST00000304990 UBE2Q1Q7Z7E8 422 aa12.78□□□□□ -0.36
COL4A3-201ENST00000304990 PARK7Q99497 189 aaKnown RBP12.78□□□□□ -0.36
COL4A3-201ENST00000304990 TAOK2Q9UL54 1235 aa12.78□□□□□ -0.36
COL4A3-201ENST00000304990 IQSEC3Q9UPP2 1182 aaPredicted RBP12.78□□□□□ -0.36
COL4A3-201ENST00000304990 FOXO4P98177 505 aa12.77□□□□□ -0.37
COL4A3-201ENST00000304990 UBE4AQ14139 1066 aa12.77□□□□□ -0.37
COL4A3-201ENST00000304990 DEFB123Q8N688 67 aa12.77□□□□□ -0.37
COL4A3-201ENST00000304990 TBC1D22AQ8WUA7 517 aa12.77□□□□□ -0.37
COL4A3-201ENST00000304990 CACNA1FO60840 1977 aa12.77□□□□□ -0.37
COL4A3-201ENST00000304990 ADCY3O60266 1144 aa12.76□□□□□ -0.37
COL4A3-201ENST00000304990 HDLBPQ00341 1268 aaKnown RBP12.76□□□□□ -0.37
COL4A3-201ENST00000304990 CAVIN4Q5BKX8 364 aa12.76□□□□□ -0.37
COL4A3-201ENST00000304990 FAM83AQ86UY5 434 aa12.76□□□□□ -0.37
COL4A3-201ENST00000304990 FAM84BQ96KN1 310 aaPredicted RBP12.76□□□□□ -0.37
COL4A3-201ENST00000304990 DEFB118Q96PH6 123 aa12.76□□□□□ -0.37
COL4A3-201ENST00000304990 MAST3O60307 1309 aa12.76□□□□□ -0.37
COL4A3-201ENST00000304990 INHAP05111 366 aa12.75□□□□□ -0.37
COL4A3-201ENST00000304990 ELNP15502 786 aa12.75□□□□□ -0.37
COL4A3-201ENST00000304990 CAPN2P17655 700 aa12.75□□□□□ -0.37
COL4A3-201ENST00000304990 INPP5BP32019 993 aa12.75□□□□□ -0.37
COL4A3-201ENST00000304990 GABRQQ9UN88 632 aa12.75□□□□□ -0.37
COL4A3-201ENST00000304990 MYH13Q9UKX3 1938 aa12.74□□□□□ -0.37
COL4A3-201ENST00000304990 TNPO2O14787 897 aaKnown RBP12.74□□□□□ -0.37
COL4A3-201ENST00000304990 CYP2C8P10632 490 aa12.74□□□□□ -0.37
COL4A3-201ENST00000304990 DDX10Q13206 875 aaKnown RBP12.74□□□□□ -0.37
COL4A3-201ENST00000304990 GRIK5Q16478 980 aa12.74□□□□□ -0.37
COL4A3-201ENST00000304990 NECAB2Q7Z6G3 386 aa12.74□□□□□ -0.37
COL4A3-201ENST00000304990 C7orf61Q8IZ16 206 aa12.74□□□□□ -0.37
COL4A3-201ENST00000304990 PAWRQ96IZ0 340 aaKnown RBP12.74□□□□□ -0.37
COL4A3-201ENST00000304990 ZDHHC15Q96MV8 337 aa12.74□□□□□ -0.37
COL4A3-201ENST00000304990 C9orf78Q9NZ63 289 aaPredicted RBP12.74□□□□□ -0.37
COL4A3-201ENST00000304990 SZT2Q5T011 3432 aa12.74□□□□□ -0.37
COL4A3-201ENST00000304990 ALPK3Q96L96 1907 aa12.74□□□□□ -0.37
COL4A3-201ENST00000304990 ADGRA2Q96PE1 1338 aa12.73□□□□□ -0.37
COL4A3-201ENST00000304990 FLT3LGP49771 235 aa12.73□□□□□ -0.37
COL4A3-201ENST00000304990 TCP10Q12799 353 aa12.73□□□□□ -0.37
COL4A3-201ENST00000304990 FKBP1CQ5VVH2 108 aa12.73□□□□□ -0.37
COL4A3-201ENST00000304990 GADL1Q6ZQY3 521 aa12.73□□□□□ -0.37
COL4A3-201ENST00000304990 ZMYND8Q9ULU4 1186 aaPredicted RBP12.73□□□□□ -0.37
COL4A3-201ENST00000304990 KCNH4Q9UQ05 1017 aa12.73□□□□□ -0.37
COL4A3-201ENST00000304990 RPAP1Q9BWH6 1393 aaPredicted RBP12.72□□□□□ -0.37
COL4A3-201ENST00000304990 MROH5Q6ZUA9 1318 aa12.72□□□□□ -0.37
COL4A3-201ENST00000304990 ZNF316A6NFI3 1004 aaPredicted RBP12.72□□□□□ -0.37
COL4A3-201ENST00000304990 F6X3S4 739 aa12.72□□□□□ -0.37
COL4A3-201ENST00000304990 GRM8O00222 908 aa12.72□□□□□ -0.37
COL4A3-201ENST00000304990 BCRP11274 1271 aa12.72□□□□□ -0.37
COL4A3-201ENST00000304990 BCAMP50895 628 aa12.72□□□□□ -0.37
COL4A3-201ENST00000304990 EPHA10Q5JZY3 1008 aa12.72□□□□□ -0.37
COL4A3-201ENST00000304990 GPR153Q6NV75 609 aa12.72□□□□□ -0.37
COL4A3-201ENST00000304990 Q7L0L9 218 aa12.72□□□□□ -0.37
COL4A3-201ENST00000304990 FASTKD5Q7L8L6 764 aaKnown RBP12.72□□□□□ -0.37
COL4A3-201ENST00000304990 PXYLP1Q8TE99 480 aa12.72□□□□□ -0.37
COL4A3-201ENST00000304990 SMCR8Q8TEV9 937 aaPredicted RBP12.72□□□□□ -0.37
COL4A3-201ENST00000304990 STXBP5LQ9Y2K9 1186 aa12.72□□□□□ -0.37
COL4A3-201ENST00000304990 BMP8BP34820 402 aa12.71□□□□□ -0.37
COL4A3-201ENST00000304990 METTL24Q5JXM2 366 aa12.71□□□□□ -0.37
COL4A3-201ENST00000304990 FAM151AQ8WW52 585 aa12.71□□□□□ -0.37
COL4A3-201ENST00000304990 COA7Q96BR5 231 aa12.71□□□□□ -0.37
COL4A3-201ENST00000304990 PUS3Q9BZE2 481 aaKnown RBP12.71□□□□□ -0.37
COL4A3-201ENST00000304990 PICK1Q9NRD5 415 aa12.71□□□□□ -0.37
COL4A3-201ENST00000304990 DOCK2Q92608 1830 aa12.7□□□□□ -0.38
COL4A3-201ENST00000304990 CXCL11O14625 94 aa12.7□□□□□ -0.38
COL4A3-201ENST00000304990 SYN1P17600 705 aa12.7□□□□□ -0.38
COL4A3-201ENST00000304990 BEND3Q5T5X7 828 aa12.7□□□□□ -0.38
COL4A3-201ENST00000304990 APOBEC3HQ6NTF7 200 aaKnown RBP12.7□□□□□ -0.38
COL4A3-201ENST00000304990 HHIPL2Q6UWX4 724 aa12.7□□□□□ -0.38
COL4A3-201ENST00000304990 FBXO33Q7Z6M2 555 aa12.7□□□□□ -0.38
COL4A3-201ENST00000304990 GDF15Q99988 308 aa12.7□□□□□ -0.38
COL4A3-201ENST00000304990 MRIQ9BWK5 157 aa12.7□□□□□ -0.38
COL4A3-201ENST00000304990 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.7□□□□□ -0.38
COL4A3-201ENST00000304990 IRF5Q13568 498 aa12.69□□□□□ -0.38
COL4A3-201ENST00000304990 MOGSQ13724 837 aa12.69□□□□□ -0.38
COL4A3-201ENST00000304990 NOL9Q5SY16 702 aaKnown RBP12.69□□□□□ -0.38
COL4A3-201ENST00000304990 GPAT2Q6NUI2 795 aa12.69□□□□□ -0.38
COL4A3-201ENST00000304990 SLC4A10Q6U841 1118 aa12.69□□□□□ -0.38
COL4A3-201ENST00000304990 TDHQ8IZJ6 230 aa12.69□□□□□ -0.38
COL4A3-201ENST00000304990 SP7Q8TDD2 431 aaPredicted RBP12.69□□□□□ -0.38
COL4A3-201ENST00000304990 DIS3LQ8TF46 1054 aaKnown RBP12.69□□□□□ -0.38
COL4A3-201ENST00000304990 UBE2OQ9C0C9 1292 aaKnown RBP12.69□□□□□ -0.38
COL4A3-201ENST00000304990 CRISPLD2Q9H0B8 497 aa12.69□□□□□ -0.38
COL4A3-201ENST00000304990 PAK6Q9NQU5 681 aaPredicted RBP12.69□□□□□ -0.38
COL4A3-201ENST00000304990 ZNF112Q9UJU3 913 aa12.69□□□□□ -0.38
COL4A3-201ENST00000304990 SUGT1Q9Y2Z0 365 aa12.69□□□□□ -0.38
COL4A3-201ENST00000304990 ZHX2Q9Y6X8 837 aa12.69□□□□□ -0.38
COL4A3-201ENST00000304990 DDX60LQ5H9U9 1706 aaKnown RBP12.68□□□□□ -0.38
COL4A3-201ENST00000304990 ZSCAN29Q8IWY8 852 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms