RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 STAMQ92783 540 aa18.12■□□□□ 0.49
CHAF1A-201ENST00000301280 GPR101Q96P66 508 aaPredicted RBP18.12■□□□□ 0.49
CHAF1A-201ENST00000301280 DSCC1Q9BVC3 393 aa18.12■□□□□ 0.49
CHAF1A-201ENST00000301280 DDX19AQ9NUU7 478 aaKnown RBP18.12■□□□□ 0.49
CHAF1A-201ENST00000301280 SLC12A7Q9Y666 1083 aa18.12■□□□□ 0.49
CHAF1A-201ENST00000301280 KIF28PB7ZC32 967 aa18.12■□□□□ 0.49
CHAF1A-201ENST00000301280 RAD21O60216 631 aa18.12■□□□□ 0.49
CHAF1A-201ENST00000301280 CYP19A1P11511 503 aaPredicted RBP18.12■□□□□ 0.49
CHAF1A-201ENST00000301280 HMGN5P82970 282 aaKnown RBP18.12■□□□□ 0.49
CHAF1A-201ENST00000301280 CPLX2Q6PUV4 134 aaKnown RBP18.12■□□□□ 0.49
CHAF1A-201ENST00000301280 FBXL16Q8N461 479 aa18.12■□□□□ 0.49
CHAF1A-201ENST00000301280 COL22A1Q8NFW1 1626 aaPredicted RBP18.12■□□□□ 0.49
CHAF1A-201ENST00000301280 IGSF3O75054 1194 aa18.11■□□□□ 0.49
CHAF1A-201ENST00000301280 CLSTN2Q9H4D0 955 aa18.11■□□□□ 0.49
CHAF1A-201ENST00000301280 SPDYE4A6NLX3 237 aa18.11■□□□□ 0.49
CHAF1A-201ENST00000301280 IARSP41252 1262 aaKnown RBP18.11■□□□□ 0.49
CHAF1A-201ENST00000301280 MAP3K12Q12852 859 aa18.11■□□□□ 0.49
CHAF1A-201ENST00000301280 NAA30Q147X3 362 aaPredicted RBP18.11■□□□□ 0.49
CHAF1A-201ENST00000301280 KLHL10Q6JEL2 608 aa18.11■□□□□ 0.49
CHAF1A-201ENST00000301280 NGLY1Q96IV0 654 aa18.11■□□□□ 0.49
CHAF1A-201ENST00000301280 ZBTB43O43298 467 aa18.11■□□□□ 0.49
CHAF1A-201ENST00000301280 ZNF827Q17R98 1081 aa18.11■□□□□ 0.49
CHAF1A-201ENST00000301280 RBM43Q6ZSC3 357 aaKnown RBP18.11■□□□□ 0.49
CHAF1A-201ENST00000301280 SPATA5Q8NB90 893 aa18.11■□□□□ 0.49
CHAF1A-201ENST00000301280 UBN2Q6ZU65 1347 aa18.11■□□□□ 0.49
CHAF1A-201ENST00000301280 SLC5A1P13866 664 aa18.1■□□□□ 0.49
CHAF1A-201ENST00000301280 CDC27P30260 824 aa18.1■□□□□ 0.49
CHAF1A-201ENST00000301280 ANTXR2P58335 489 aa18.1■□□□□ 0.49
CHAF1A-201ENST00000301280 SPTLC2O15270 562 aa18.1■□□□□ 0.49
CHAF1A-201ENST00000301280 CIAO1O76071 339 aa18.1■□□□□ 0.49
CHAF1A-201ENST00000301280 DYNLL1P63167 89 aaKnown RBP18.1■□□□□ 0.49
CHAF1A-201ENST00000301280 LCORLQ8N3X6 602 aa18.1■□□□□ 0.49
CHAF1A-201ENST00000301280 MYRIPQ8NFW9 859 aa18.1■□□□□ 0.49
CHAF1A-201ENST00000301280 ERICH2A1L162 156 aa18.1■□□□□ 0.49
CHAF1A-201ENST00000301280 PDE8AO60658 829 aa18.1■□□□□ 0.49
CHAF1A-201ENST00000301280 EVX2Q03828 476 aa18.1■□□□□ 0.49
CHAF1A-201ENST00000301280 KCNF1Q9H3M0 494 aa18.1■□□□□ 0.49
CHAF1A-201ENST00000301280 SRP68Q9UHB9 627 aaKnown RBP18.1■□□□□ 0.49
CHAF1A-201ENST00000301280 RIPOR2Q9Y4F9 1068 aa18.1■□□□□ 0.49
CHAF1A-201ENST00000301280 CARMIL3Q8ND23 1372 aa18.1■□□□□ 0.49
CHAF1A-201ENST00000301280 ZSCAN16Q9H4T2 348 aaPredicted RBP18.09■□□□□ 0.49
CHAF1A-201ENST00000301280 NEDD4P46934 1319 aa18.09■□□□□ 0.49
CHAF1A-201ENST00000301280 DHX16O60231 1041 aaKnown RBP18.09■□□□□ 0.49
CHAF1A-201ENST00000301280 MFSD6Q6ZSS7 791 aa18.09■□□□□ 0.49
CHAF1A-201ENST00000301280 UTP14AQ9BVJ6 771 aaKnown RBP18.09■□□□□ 0.49
CHAF1A-201ENST00000301280 GUCY1A2P33402 732 aa18.08■□□□□ 0.49
CHAF1A-201ENST00000301280 DPCR1Q3MIW9 517 aa18.08■□□□□ 0.49
CHAF1A-201ENST00000301280 CCDC144BQ3MJ40 725 aa18.08■□□□□ 0.49
CHAF1A-201ENST00000301280 GRAMD1CQ8IYS0 662 aa18.08■□□□□ 0.49
CHAF1A-201ENST00000301280 ZSWIM5Q9P217 1185 aa18.08■□□□□ 0.49
CHAF1A-201ENST00000301280 ABCC12Q96J65 1359 aa18.08■□□□□ 0.48
CHAF1A-201ENST00000301280 MYO5AQ9Y4I1 1855 aaKnown RBP18.08■□□□□ 0.48
CHAF1A-201ENST00000301280 BTBD18B2RXH4 712 aa18.08■□□□□ 0.48
CHAF1A-201ENST00000301280 EXOSC10Q01780 885 aaKnown RBP18.08■□□□□ 0.48
CHAF1A-201ENST00000301280 AKAP17AQ02040 695 aaKnown RBP18.08■□□□□ 0.48
CHAF1A-201ENST00000301280 MRPS27Q92552 414 aaKnown RBP18.08■□□□□ 0.48
CHAF1A-201ENST00000301280 UBAC1Q9BSL1 405 aa18.08■□□□□ 0.48
CHAF1A-201ENST00000301280 COL14A1Q05707 1796 aaKnown RBP18.08■□□□□ 0.48
CHAF1A-201ENST00000301280 LOC102724428A0A0B4J2F2 783 aa18.08■□□□□ 0.48
CHAF1A-201ENST00000301280 SIK1P57059 783 aa18.08■□□□□ 0.48
CHAF1A-201ENST00000301280 KRT40Q6A162 431 aa18.08■□□□□ 0.48
CHAF1A-201ENST00000301280 SMARCC2Q8TAQ2 1214 aa18.08■□□□□ 0.48
CHAF1A-201ENST00000301280 A0A1B0GUL6 1792 aa18.07■□□□□ 0.48
CHAF1A-201ENST00000301280 CHD4Q14839 1912 aa18.07■□□□□ 0.48
CHAF1A-201ENST00000301280 SLC3A2P08195 630 aaKnown RBP18.07■□□□□ 0.48
CHAF1A-201ENST00000301280 NR5A1Q13285 461 aa18.07■□□□□ 0.48
CHAF1A-201ENST00000301280 UIMC1Q96RL1 719 aa18.07■□□□□ 0.48
CHAF1A-201ENST00000301280 FBXO3Q9UK99 471 aa18.07■□□□□ 0.48
CHAF1A-201ENST00000301280 CASZ1Q86V15 1759 aa18.07■□□□□ 0.48
CHAF1A-201ENST00000301280 PHLPP1O60346 1717 aa18.07■□□□□ 0.48
CHAF1A-201ENST00000301280 PES1O00541 588 aaKnown RBP18.07■□□□□ 0.48
CHAF1A-201ENST00000301280 FAM47AQ5JRC9 791 aa18.07■□□□□ 0.48
CHAF1A-201ENST00000301280 TMC6Q7Z403 805 aa18.07■□□□□ 0.48
CHAF1A-201ENST00000301280 MAP7D2Q96T17 732 aa18.07■□□□□ 0.48
CHAF1A-201ENST00000301280 TEX13AQ9BXU3 409 aaPredicted RBP18.07■□□□□ 0.48
CHAF1A-201ENST00000301280 ANGEL1Q9UNK9 670 aaKnown RBP18.07■□□□□ 0.48
CHAF1A-201ENST00000301280 PLA2G12BQ9BX93 195 aa18.06■□□□□ 0.48
CHAF1A-201ENST00000301280 DISP2A7MBM2 1401 aa18.06■□□□□ 0.48
CHAF1A-201ENST00000301280 FOXP2O15409 715 aa18.06■□□□□ 0.48
CHAF1A-201ENST00000301280 CASP1P29466 404 aa18.06■□□□□ 0.48
CHAF1A-201ENST00000301280 ADD2P35612 726 aa18.06■□□□□ 0.48
CHAF1A-201ENST00000301280 CBX1P83916 185 aa18.06■□□□□ 0.48
CHAF1A-201ENST00000301280 TRIM28Q13263 835 aaKnown RBP18.06■□□□□ 0.48
CHAF1A-201ENST00000301280 PNOCQ13519 176 aa18.06■□□□□ 0.48
CHAF1A-201ENST00000301280 PUM3Q15397 648 aaKnown RBP18.06■□□□□ 0.48
CHAF1A-201ENST00000301280 CEP57L1Q8IYX8 460 aa18.06■□□□□ 0.48
CHAF1A-201ENST00000301280 IFNL3Q8IZI9 196 aa18.06■□□□□ 0.48
CHAF1A-201ENST00000301280 SALL1Q9NSC2 1324 aa18.06■□□□□ 0.48
CHAF1A-201ENST00000301280 AFMP43652 599 aa18.06■□□□□ 0.48
CHAF1A-201ENST00000301280 MYSM1Q5VVJ2 828 aa18.06■□□□□ 0.48
CHAF1A-201ENST00000301280 C3orf67Q6ZVT6 689 aa18.06■□□□□ 0.48
CHAF1A-201ENST00000301280 CACTINQ8WUQ7 758 aaKnown RBP18.06■□□□□ 0.48
CHAF1A-201ENST00000301280 IFNKQ9P0W0 207 aa18.06■□□□□ 0.48
CHAF1A-201ENST00000301280 SERPINC1P01008 464 aa18.05■□□□□ 0.48
CHAF1A-201ENST00000301280 CHRNDQ07001 517 aa18.05■□□□□ 0.48
CHAF1A-201ENST00000301280 ITPK1Q13572 414 aa18.05■□□□□ 0.48
CHAF1A-201ENST00000301280 ERFEQ4G0M1 354 aa18.05■□□□□ 0.48
CHAF1A-201ENST00000301280 RASSF8Q8NHQ8 419 aa18.05■□□□□ 0.48
CHAF1A-201ENST00000301280 FOXN1O15353 648 aa18.05■□□□□ 0.48
CHAF1A-201ENST00000301280 CDK11BP21127 795 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms