RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 KCTD16Q68DU8 428 aa16.47■□□□□ 0.23
CDT1-201ENST00000301019 PI4KAP1Q8N8J0 262 aa16.47■□□□□ 0.23
CDT1-201ENST00000301019 MAP4K1Q92918 833 aa16.47■□□□□ 0.23
CDT1-201ENST00000301019 CDC27P30260 824 aa16.47■□□□□ 0.23
CDT1-201ENST00000301019 RDXP35241 583 aaKnown RBP16.47■□□□□ 0.23
CDT1-201ENST00000301019 PSME1Q06323 249 aa16.47■□□□□ 0.23
CDT1-201ENST00000301019 HDGFL1Q5TGJ6 251 aa16.47■□□□□ 0.23
CDT1-201ENST00000301019 NUTM2GQ5VZR2 741 aa16.47■□□□□ 0.23
CDT1-201ENST00000301019 SGSM3Q96HU1 749 aa16.47■□□□□ 0.23
CDT1-201ENST00000301019 KIF24Q5T7B8 1368 aa16.47■□□□□ 0.23
CDT1-201ENST00000301019 PNPLA6Q8IY17 1366 aa16.47■□□□□ 0.23
CDT1-201ENST00000301019 CDC25CP30307 473 aa16.47■□□□□ 0.23
CDT1-201ENST00000301019 MATR3P43243 847 aaKnown RBP eCLIP16.47■□□□□ 0.23
CDT1-201ENST00000301019 SETQ01105 290 aaPredicted RBP16.47■□□□□ 0.23
CDT1-201ENST00000301019 GRAMD1CQ8IYS0 662 aa16.47■□□□□ 0.23
CDT1-201ENST00000301019 SSH3Q8TE77 659 aa16.47■□□□□ 0.23
CDT1-201ENST00000301019 HSD3B7Q9H2F3 369 aa16.47■□□□□ 0.23
CDT1-201ENST00000301019 INTS13Q9NVM9 706 aa16.47■□□□□ 0.23
CDT1-201ENST00000301019 PDE4BQ07343 736 aa16.46■□□□□ 0.23
CDT1-201ENST00000301019 ILDR1Q86SU0 546 aaPredicted RBP16.46■□□□□ 0.23
CDT1-201ENST00000301019 TICAM2Q86XR7 235 aa16.46■□□□□ 0.23
CDT1-201ENST00000301019 TRIM10Q9UDY6 481 aa16.46■□□□□ 0.23
CDT1-201ENST00000301019 CDC42BPGQ6DT37 1551 aa16.46■□□□□ 0.23
CDT1-201ENST00000301019 ANKRD1Q15327 319 aa16.46■□□□□ 0.23
CDT1-201ENST00000301019 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.46■□□□□ 0.23
CDT1-201ENST00000301019 KIF5CO60282 957 aa16.45■□□□□ 0.22
CDT1-201ENST00000301019 PFKFB1P16118 471 aa16.45■□□□□ 0.22
CDT1-201ENST00000301019 RXRAP19793 462 aa16.45■□□□□ 0.22
CDT1-201ENST00000301019 SAMD1Q6SPF0 538 aaPredicted RBP16.45■□□□□ 0.22
CDT1-201ENST00000301019 ZNF396Q96N95 335 aaPredicted RBP16.45■□□□□ 0.22
CDT1-201ENST00000301019 SCLT1Q96NL6 688 aa16.45■□□□□ 0.22
CDT1-201ENST00000301019 TM6SF1Q9BZW5 370 aa16.45■□□□□ 0.22
CDT1-201ENST00000301019 PLEKHG3A1L390 1219 aa16.45■□□□□ 0.22
CDT1-201ENST00000301019 CTAGE15A4D2H0 777 aa16.45■□□□□ 0.22
CDT1-201ENST00000301019 CTAGE8P0CG41 777 aa16.45■□□□□ 0.22
CDT1-201ENST00000301019 GNGT1P63211 74 aa16.45■□□□□ 0.22
CDT1-201ENST00000301019 CTAGE6Q86UF2 777 aa16.45■□□□□ 0.22
CDT1-201ENST00000301019 CTAGE4Q8IX94 777 aa16.45■□□□□ 0.22
CDT1-201ENST00000301019 C9orf78Q9NZ63 289 aaPredicted RBP16.45■□□□□ 0.22
CDT1-201ENST00000301019 LMTK3Q96Q04 1460 aa16.45■□□□□ 0.22
CDT1-201ENST00000301019 CTDNEP1O95476 244 aa16.45■□□□□ 0.22
CDT1-201ENST00000301019 GSCP56915 257 aaPredicted RBP16.45■□□□□ 0.22
CDT1-201ENST00000301019 NLRP12P59046 1061 aa16.45■□□□□ 0.22
CDT1-201ENST00000301019 CWF19L2Q2TBE0 894 aaKnown RBP16.45■□□□□ 0.22
CDT1-201ENST00000301019 TMEM139Q8IV31 216 aa16.45■□□□□ 0.22
CDT1-201ENST00000301019 VSTM4Q8IW00 320 aa16.45■□□□□ 0.22
CDT1-201ENST00000301019 SUGP1Q8IWZ8 645 aaKnown RBP16.45■□□□□ 0.22
CDT1-201ENST00000301019 FAM71BQ8TC56 605 aa16.45■□□□□ 0.22
CDT1-201ENST00000301019 AIFM3Q96NN9 605 aa16.45■□□□□ 0.22
CDT1-201ENST00000301019 EDC4Q6P2E9 1401 aaKnown RBP16.45■□□□□ 0.22
CDT1-201ENST00000301019 SYF2O95926 243 aaKnown RBP16.44■□□□□ 0.22
CDT1-201ENST00000301019 SATB1Q01826 763 aa16.44■□□□□ 0.22
CDT1-201ENST00000301019 NSUN7Q8NE18 718 aaKnown RBP16.44■□□□□ 0.22
CDT1-201ENST00000301019 EAF2Q96CJ1 260 aaPredicted RBP16.44■□□□□ 0.22
CDT1-201ENST00000301019 SAMSN1Q9NSI8 373 aaKnown RBP16.44■□□□□ 0.22
CDT1-201ENST00000301019 TEX33O43247 280 aa16.44■□□□□ 0.22
CDT1-201ENST00000301019 HAND2P61296 217 aa16.44■□□□□ 0.22
CDT1-201ENST00000301019 MYL5Q02045 173 aa16.44■□□□□ 0.22
CDT1-201ENST00000301019 AIMP1Q12904 312 aaKnown RBP16.44■□□□□ 0.22
CDT1-201ENST00000301019 RAD9BQ6WBX8 426 aa16.44■□□□□ 0.22
CDT1-201ENST00000301019 DDX46Q7L014 1031 aaKnown RBP16.44■□□□□ 0.22
CDT1-201ENST00000301019 CTCFLQ8NI51 663 aaPredicted RBP16.44■□□□□ 0.22
CDT1-201ENST00000301019 ACBD3Q9H3P7 528 aa16.44■□□□□ 0.22
CDT1-201ENST00000301019 ACEP12821 1306 aa16.44■□□□□ 0.22
CDT1-201ENST00000301019 SPTLC2O15270 562 aa16.43■□□□□ 0.22
CDT1-201ENST00000301019 PPP1R12BO60237 982 aaPredicted RBP16.43■□□□□ 0.22
CDT1-201ENST00000301019 CDC25AP30304 524 aa16.43■□□□□ 0.22
CDT1-201ENST00000301019 PDCLQ13371 301 aa16.43■□□□□ 0.22
CDT1-201ENST00000301019 ARMC3Q5W041 872 aa16.43■□□□□ 0.22
CDT1-201ENST00000301019 SYNE3Q6ZMZ3 975 aa16.43■□□□□ 0.22
CDT1-201ENST00000301019 TC2NQ8N9U0 490 aa16.43■□□□□ 0.22
CDT1-201ENST00000301019 CEP89Q96ST8 783 aa16.43■□□□□ 0.22
CDT1-201ENST00000301019 PSMB7Q99436 277 aa16.43■□□□□ 0.22
CDT1-201ENST00000301019 CRACR2AQ9BSW2 395 aa16.43■□□□□ 0.22
CDT1-201ENST00000301019 GUCA1BQ9UMX6 200 aa16.43■□□□□ 0.22
CDT1-201ENST00000301019 CCDC189A1A4V9 331 aa16.43■□□□□ 0.22
CDT1-201ENST00000301019 BACH1O14867 736 aa16.43■□□□□ 0.22
CDT1-201ENST00000301019 MYBL1P10243 752 aa16.43■□□□□ 0.22
CDT1-201ENST00000301019 EIF5P55010 431 aaKnown RBP16.43■□□□□ 0.22
CDT1-201ENST00000301019 EGFL6Q8IUX8 553 aa16.43■□□□□ 0.22
CDT1-201ENST00000301019 ADRA2BP18089 450 aa16.43■□□□□ 0.22
CDT1-201ENST00000301019 CALR3Q96L12 384 aaKnown RBP16.43■□□□□ 0.22
CDT1-201ENST00000301019 CDC23Q9UJX2 597 aa16.43■□□□□ 0.22
CDT1-201ENST00000301019 GOLGA6CA6NDK9 693 aa16.42■□□□□ 0.22
CDT1-201ENST00000301019 PES1O00541 588 aaKnown RBP16.42■□□□□ 0.22
CDT1-201ENST00000301019 CYP21A2P08686 494 aa16.42■□□□□ 0.22
CDT1-201ENST00000301019 CCDC175P0C221 793 aa16.42■□□□□ 0.22
CDT1-201ENST00000301019 GOLGA6DP0CG33 693 aa16.42■□□□□ 0.22
CDT1-201ENST00000301019 NF2P35240 595 aa16.42■□□□□ 0.22
CDT1-201ENST00000301019 OLFM4Q6UX06 510 aa16.42■□□□□ 0.22
CDT1-201ENST00000301019 SH2D3CQ8N5H7 860 aa16.42■□□□□ 0.22
CDT1-201ENST00000301019 EVI5LQ96CN4 794 aa16.42■□□□□ 0.22
CDT1-201ENST00000301019 GOLGA6AQ9NYA3 693 aa16.42■□□□□ 0.22
CDT1-201ENST00000301019 NFE2L3Q9Y4A8 694 aa16.42■□□□□ 0.22
CDT1-201ENST00000301019 TOPAZ1Q8N9V7 1692 aa16.42■□□□□ 0.22
CDT1-201ENST00000301019 IRF6O14896 467 aa16.42■□□□□ 0.22
CDT1-201ENST00000301019 MYBL2P10244 700 aa16.42■□□□□ 0.22
CDT1-201ENST00000301019 SYKP43405 635 aa16.42■□□□□ 0.22
CDT1-201ENST00000301019 GPATCH3Q96I76 525 aa16.42■□□□□ 0.22
CDT1-201ENST00000301019 NDUFAB1O14561 156 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms