RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 TXNDC16Q9P2K2 825 aa15.26■□□□□ 0.03
CHRFAM7A-201ENST00000299847 GINS2Q9Y248 185 aa15.26■□□□□ 0.03
CHRFAM7A-201ENST00000299847 MAP3K5Q99683 1374 aa15.26■□□□□ 0.03
CHRFAM7A-201ENST00000299847 TPD52P55327 224 aaPredicted RBP15.25■□□□□ 0.03
CHRFAM7A-201ENST00000299847 TPTE2Q6XPS3 522 aa15.25■□□□□ 0.03
CHRFAM7A-201ENST00000299847 USP26Q9BXU7 913 aa15.25■□□□□ 0.03
CHRFAM7A-201ENST00000299847 LUC7L2Q9Y383 392 aaKnown RBP15.25■□□□□ 0.03
CHRFAM7A-201ENST00000299847 ATP2A1O14983 1001 aa15.25■□□□□ 0.03
CHRFAM7A-201ENST00000299847 NCBP1Q09161 790 aaKnown RBP15.25■□□□□ 0.03
CHRFAM7A-201ENST00000299847 DENND4BO75064 1496 aaPredicted RBP15.25■□□□□ 0.03
CHRFAM7A-201ENST00000299847 SH3BP5O60239 455 aa15.25■□□□□ 0.03
CHRFAM7A-201ENST00000299847 USH1GQ495M9 461 aa15.25■□□□□ 0.03
CHRFAM7A-201ENST00000299847 TTC41PQ6P2S7 1318 aa15.25■□□□□ 0.03
CHRFAM7A-201ENST00000299847 FAM227BQ96M60 508 aa15.25■□□□□ 0.03
CHRFAM7A-201ENST00000299847 ZMYND15Q9H091 742 aa15.25■□□□□ 0.03
CHRFAM7A-201ENST00000299847 TXKP42681 527 aa15.25■□□□□ 0.03
CHRFAM7A-201ENST00000299847 UTP14CQ5TAP6 766 aaKnown RBP15.25■□□□□ 0.03
CHRFAM7A-201ENST00000299847 SNX21Q969T3 373 aa15.25■□□□□ 0.03
CHRFAM7A-201ENST00000299847 UFL1O94874 794 aa15.25■□□□□ 0.03
CHRFAM7A-201ENST00000299847 MYCLP12524 364 aaPredicted RBP15.25■□□□□ 0.03
CHRFAM7A-201ENST00000299847 ITGA6P23229 1130 aa15.25■□□□□ 0.03
CHRFAM7A-201ENST00000299847 AKR1B15C9JRZ8 316 aaPredicted RBP15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 PPP2R3AQ06190 1150 aa15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 CFAP157Q5JU67 520 aa15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 TEX11Q8IYF3 940 aa15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 EYA1Q99502 592 aa15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 AATFQ9NY61 560 aaKnown RBP eCLIP15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 FRMD4BQ9Y2L6 1034 aa15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 KDM5BQ9UGL1 1544 aa15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 WDR7Q9Y4E6 1490 aa15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 SLC27A2O14975 620 aa15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 BEND3Q5T5X7 828 aa15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 SEL1L2Q5TEA6 688 aa15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 NCAPH2Q6IBW4 605 aa15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 ODF2LQ9ULJ1 636 aa15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 PPP2R5CQ13362 524 aa15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 DDX12PQ92771 950 aa15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 RNMTO43148 476 aaKnown RBP15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 PPANQ9NQ55 473 aaKnown RBP15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 RPS6KB1P23443 525 aa15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 RBSNQ9H1K0 784 aa15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 CEP83Q9Y592 693 aa15.24■□□□□ 0.03
CHRFAM7A-201ENST00000299847 A0A1B0GUL7 405 aa15.23■□□□□ 0.03
CHRFAM7A-201ENST00000299847 DYMQ7RTS9 669 aa15.23■□□□□ 0.03
CHRFAM7A-201ENST00000299847 GNA11P29992 359 aa15.23■□□□□ 0.03
CHRFAM7A-201ENST00000299847 LINS1Q8NG48 757 aa15.23■□□□□ 0.03
CHRFAM7A-201ENST00000299847 PHKBQ93100 1093 aa15.23■□□□□ 0.03
CHRFAM7A-201ENST00000299847 RNF34Q969K3 372 aa15.23■□□□□ 0.03
CHRFAM7A-201ENST00000299847 STMN4Q9H169 189 aaPredicted RBP15.23■□□□□ 0.03
CHRFAM7A-201ENST00000299847 POLR2DO15514 142 aaKnown RBP15.23■□□□□ 0.03
CHRFAM7A-201ENST00000299847 VIMP08670 466 aaKnown RBP15.23■□□□□ 0.03
CHRFAM7A-201ENST00000299847 EPB41P11171 864 aaKnown RBP15.23■□□□□ 0.03
CHRFAM7A-201ENST00000299847 C10orf67Q8IYJ2 551 aa15.23■□□□□ 0.03
CHRFAM7A-201ENST00000299847 DCTPP1Q9H773 170 aa15.23■□□□□ 0.03
CHRFAM7A-201ENST00000299847 NBPF11Q86T75 865 aa15.23■□□□□ 0.03
CHRFAM7A-201ENST00000299847 IGSF22Q8N9C0 903 aa15.23■□□□□ 0.03
CHRFAM7A-201ENST00000299847 BIN2Q9UBW5 565 aaPredicted RBP15.23■□□□□ 0.03
CHRFAM7A-201ENST00000299847 V9GY48 417 aaPredicted RBP15.23■□□□□ 0.03
CHRFAM7A-201ENST00000299847 TCP10Q12799 353 aa15.23■□□□□ 0.03
CHRFAM7A-201ENST00000299847 GEN1Q17RS7 908 aa15.23■□□□□ 0.03
CHRFAM7A-201ENST00000299847 TMCO4Q5TGY1 634 aa15.23■□□□□ 0.03
CHRFAM7A-201ENST00000299847 FNBP1Q96RU3 617 aa15.23■□□□□ 0.03
CHRFAM7A-201ENST00000299847 USTQ9Y2C2 406 aa15.23■□□□□ 0.03
CHRFAM7A-201ENST00000299847 SPOPO43791 374 aa15.22■□□□□ 0.03
CHRFAM7A-201ENST00000299847 IVLP07476 585 aa15.22■□□□□ 0.03
CHRFAM7A-201ENST00000299847 IQUBQ8NA54 791 aa15.22■□□□□ 0.03
CHRFAM7A-201ENST00000299847 RBM28Q9NW13 759 aaKnown RBP15.22■□□□□ 0.03
CHRFAM7A-201ENST00000299847 PLCH2O75038 1416 aa15.22■□□□□ 0.03
CHRFAM7A-201ENST00000299847 ELP1O95163 1332 aa15.22■□□□□ 0.03
CHRFAM7A-201ENST00000299847 KAT6BQ8WYB5 2073 aa15.22■□□□□ 0.03
CHRFAM7A-201ENST00000299847 STAMQ92783 540 aa15.22■□□□□ 0.03
CHRFAM7A-201ENST00000299847 CLSTN2Q9H4D0 955 aa15.22■□□□□ 0.03
CHRFAM7A-201ENST00000299847 CLCN1P35523 988 aa15.22■□□□□ 0.03
CHRFAM7A-201ENST00000299847 EVCP57679 992 aa15.22■□□□□ 0.03
CHRFAM7A-201ENST00000299847 RBM17Q96I25 401 aaKnown RBP15.22■□□□□ 0.03
CHRFAM7A-201ENST00000299847 ABCC1P33527 1531 aa15.22■□□□□ 0.03
CHRFAM7A-201ENST00000299847 BRAPQ7Z569 592 aa15.22■□□□□ 0.03
CHRFAM7A-201ENST00000299847 SMC1BQ8NDV3 1235 aa15.22■□□□□ 0.03
CHRFAM7A-201ENST00000299847 JDP2Q8WYK2 163 aa15.22■□□□□ 0.03
CHRFAM7A-201ENST00000299847 BLZF1Q9H2G9 400 aa15.22■□□□□ 0.03
CHRFAM7A-201ENST00000299847 TNFAIP3P21580 790 aa15.21■□□□□ 0.03
CHRFAM7A-201ENST00000299847 KIFC2Q96AC6 838 aa15.21■□□□□ 0.03
CHRFAM7A-201ENST00000299847 E7EVH7 732 aa15.21■□□□□ 0.03
CHRFAM7A-201ENST00000299847 HOXC9P31274 260 aa15.21■□□□□ 0.03
CHRFAM7A-201ENST00000299847 DBNDD2Q9BQY9 259 aa15.21■□□□□ 0.03
CHRFAM7A-201ENST00000299847 XAGE2Q96GT9 111 aa15.21■□□□□ 0.03
CHRFAM7A-201ENST00000299847 ANAPC4Q9UJX5 808 aa15.21■□□□□ 0.03
CHRFAM7A-201ENST00000299847 NAP1L3Q99457 506 aaPredicted RBP15.21■□□□□ 0.03
CHRFAM7A-201ENST00000299847 BTG4Q9NY30 223 aa15.21■□□□□ 0.03
CHRFAM7A-201ENST00000299847 MYL5Q02045 173 aa15.21■□□□□ 0.02
CHRFAM7A-201ENST00000299847 WDR44Q5JSH3 913 aa15.21■□□□□ 0.02
CHRFAM7A-201ENST00000299847 KRBA2Q6ZNG9 492 aa15.21■□□□□ 0.02
CHRFAM7A-201ENST00000299847 NELFCDQ8IXH7 590 aa15.21■□□□□ 0.02
CHRFAM7A-201ENST00000299847 FAM76AQ8TAV0 307 aa15.21■□□□□ 0.02
CHRFAM7A-201ENST00000299847 TRIM7Q9C029 511 aa15.21■□□□□ 0.02
CHRFAM7A-201ENST00000299847 ZBTB40Q9NUA8 1239 aa15.21■□□□□ 0.02
CHRFAM7A-201ENST00000299847 KCNJ14Q9UNX9 436 aa15.21■□□□□ 0.02
CHRFAM7A-201ENST00000299847 RIMS2Q9UQ26 1411 aa15.21■□□□□ 0.02
CHRFAM7A-201ENST00000299847 CUL7Q14999 1698 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms