RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 PPIP5K2O43314 1243 aa15.24■□□□□ 0.03
HPS3-201ENST00000296051 OAS2P29728 719 aaKnown RBP15.24■□□□□ 0.03
HPS3-201ENST00000296051 RRAGBQ5VZM2 374 aa15.24■□□□□ 0.03
HPS3-201ENST00000296051 KRT27Q7Z3Y8 459 aa15.24■□□□□ 0.03
HPS3-201ENST00000296051 DESI2Q9BSY9 194 aa15.24■□□□□ 0.03
HPS3-201ENST00000296051 MAST1Q9Y2H9 1570 aa15.24■□□□□ 0.03
HPS3-201ENST00000296051 PPP1R12BO60237 982 aaPredicted RBP15.23■□□□□ 0.03
HPS3-201ENST00000296051 CCT6AP40227 531 aaKnown RBP15.23■□□□□ 0.03
HPS3-201ENST00000296051 HLTFQ14527 1009 aaKnown RBP eCLIP15.23■□□□□ 0.03
HPS3-201ENST00000296051 C11orf57Q6ZUT1 292 aaPredicted RBP15.23■□□□□ 0.03
HPS3-201ENST00000296051 ZKSCAN3Q9BRR0 538 aa15.23■□□□□ 0.03
HPS3-201ENST00000296051 KIAA0232Q92628 1395 aa15.23■□□□□ 0.03
HPS3-201ENST00000296051 KDM5DQ9BY66 1539 aa15.23■□□□□ 0.03
HPS3-201ENST00000296051 USP8P40818 1118 aa15.23■□□□□ 0.03
HPS3-201ENST00000296051 ADKP55263 362 aaKnown RBP15.23■□□□□ 0.03
HPS3-201ENST00000296051 MTX1Q13505 466 aa15.23■□□□□ 0.03
HPS3-201ENST00000296051 TEX11Q8IYF3 940 aa15.23■□□□□ 0.03
HPS3-201ENST00000296051 RASSF4Q9H2L5 321 aa15.23■□□□□ 0.03
HPS3-201ENST00000296051 ZSWIM6Q9HCJ5 1215 aa15.23■□□□□ 0.03
HPS3-201ENST00000296051 MTIF2P46199 727 aaKnown RBP15.23■□□□□ 0.03
HPS3-201ENST00000296051 IQCEQ6IPM2 695 aa15.23■□□□□ 0.03
HPS3-201ENST00000296051 FAM196AQ6ZSG2 479 aa15.23■□□□□ 0.03
HPS3-201ENST00000296051 MAPK8IP1Q9UQF2 711 aa15.23■□□□□ 0.03
HPS3-201ENST00000296051 ATF5Q9Y2D1 282 aaPredicted RBP15.23■□□□□ 0.03
HPS3-201ENST00000296051 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.23■□□□□ 0.03
HPS3-201ENST00000296051 CTAGE9A4FU28 777 aa15.23■□□□□ 0.03
HPS3-201ENST00000296051 ZYXQ15942 572 aaKnown RBP15.23■□□□□ 0.03
HPS3-201ENST00000296051 NIM1KQ8IY84 436 aa15.23■□□□□ 0.03
HPS3-201ENST00000296051 ZNF526Q8TF50 670 aaPredicted RBP15.23■□□□□ 0.03
HPS3-201ENST00000296051 MYL10Q9BUA6 226 aa15.23■□□□□ 0.03
HPS3-201ENST00000296051 SSR1P43307 286 aaKnown RBP15.22■□□□□ 0.03
HPS3-201ENST00000296051 CACNA2D4Q7Z3S7 1137 aa15.22■□□□□ 0.03
HPS3-201ENST00000296051 IL17REQ8NFR9 667 aa15.22■□□□□ 0.03
HPS3-201ENST00000296051 PDE8AO60658 829 aa15.22■□□□□ 0.03
HPS3-201ENST00000296051 PAFAH1B1P43034 410 aa15.22■□□□□ 0.03
HPS3-201ENST00000296051 DPY19L2Q6NUT2 758 aa15.22■□□□□ 0.03
HPS3-201ENST00000296051 OSBPL3Q9H4L5 887 aa15.22■□□□□ 0.03
HPS3-201ENST00000296051 TRIM21P19474 475 aaKnown RBP15.22■□□□□ 0.03
HPS3-201ENST00000296051 UBA7P41226 1012 aa15.22■□□□□ 0.03
HPS3-201ENST00000296051 STAMQ92783 540 aa15.22■□□□□ 0.03
HPS3-201ENST00000296051 PHKBQ93100 1093 aa15.22■□□□□ 0.03
HPS3-201ENST00000296051 SEC31AO94979 1220 aaKnown RBP15.22■□□□□ 0.03
HPS3-201ENST00000296051 SP4Q02446 784 aa15.22■□□□□ 0.03
HPS3-201ENST00000296051 TCP11L1Q9NUJ3 509 aa15.22■□□□□ 0.03
HPS3-201ENST00000296051 SAP30BPQ9UHR5 308 aaKnown RBP15.22■□□□□ 0.03
HPS3-201ENST00000296051 HINFPQ9BQA5 517 aa15.21■□□□□ 0.03
HPS3-201ENST00000296051 CCDC113Q9H0I3 377 aa15.21■□□□□ 0.03
HPS3-201ENST00000296051 NPHP4O75161 1426 aaPredicted RBP15.21■□□□□ 0.03
HPS3-201ENST00000296051 LOC102724428A0A0B4J2F2 783 aa15.21■□□□□ 0.03
HPS3-201ENST00000296051 SIK1P57059 783 aa15.21■□□□□ 0.03
HPS3-201ENST00000296051 NCBP1Q09161 790 aaKnown RBP15.21■□□□□ 0.03
HPS3-201ENST00000296051 ANO1Q5XXA6 986 aa15.21■□□□□ 0.03
HPS3-201ENST00000296051 TM6SF1Q9BZW5 370 aa15.21■□□□□ 0.03
HPS3-201ENST00000296051 HEATR3Q7Z4Q2 680 aa15.21■□□□□ 0.02
HPS3-201ENST00000296051 SEPT12Q8IYM1 358 aa15.21■□□□□ 0.02
HPS3-201ENST00000296051 METTL22Q9BUU2 404 aaPredicted RBP15.21■□□□□ 0.02
HPS3-201ENST00000296051 POTEB2H3BUK9 544 aa15.2■□□□□ 0.02
HPS3-201ENST00000296051 TCP10Q12799 353 aa15.2■□□□□ 0.02
HPS3-201ENST00000296051 FLAD1Q8NFF5 587 aa15.2■□□□□ 0.02
HPS3-201ENST00000296051 KRT23Q9C075 422 aa15.2■□□□□ 0.02
HPS3-201ENST00000296051 NFE2L3Q9Y4A8 694 aa15.2■□□□□ 0.02
HPS3-201ENST00000296051 KDM5AP29375 1690 aaKnown RBP15.2■□□□□ 0.02
HPS3-201ENST00000296051 ZNF853P0CG23 659 aa15.2■□□□□ 0.02
HPS3-201ENST00000296051 TRIM47Q96LD4 638 aa15.2■□□□□ 0.02
HPS3-201ENST00000296051 PLIN2Q99541 437 aa15.2■□□□□ 0.02
HPS3-201ENST00000296051 TLR7Q9NYK1 1049 aaKnown RBP15.2■□□□□ 0.02
HPS3-201ENST00000296051 EDC4Q6P2E9 1401 aaKnown RBP15.2■□□□□ 0.02
HPS3-201ENST00000296051 PRDM15P57071 1507 aaPredicted RBP15.2■□□□□ 0.02
HPS3-201ENST00000296051 EYA2O00167 538 aa15.2■□□□□ 0.02
HPS3-201ENST00000296051 ZEB2O60315 1214 aa15.2■□□□□ 0.02
HPS3-201ENST00000296051 ZNF827Q17R98 1081 aa15.2■□□□□ 0.02
HPS3-201ENST00000296051 H7C1D1 291 aa15.2■□□□□ 0.02
HPS3-201ENST00000296051 AKR1B10O60218 316 aa15.2■□□□□ 0.02
HPS3-201ENST00000296051 SMC1AQ14683 1233 aaKnown RBP15.2■□□□□ 0.02
HPS3-201ENST00000296051 GIMAP7Q8NHV1 300 aa15.2■□□□□ 0.02
HPS3-201ENST00000296051 SMARCC2Q8TAQ2 1214 aa15.2■□□□□ 0.02
HPS3-201ENST00000296051 VPS16Q9H269 839 aa15.2■□□□□ 0.02
HPS3-201ENST00000296051 PICK1Q9NRD5 415 aa15.2■□□□□ 0.02
HPS3-201ENST00000296051 METP08581 1390 aa15.2■□□□□ 0.02
HPS3-201ENST00000296051 A0A1B0GUL7 405 aa15.19■□□□□ 0.02
HPS3-201ENST00000296051 NEBLO76041 1014 aa15.19■□□□□ 0.02
HPS3-201ENST00000296051 RPS8P62241 208 aaKnown RBP15.19■□□□□ 0.02
HPS3-201ENST00000296051 TNNI3KQ59H18 835 aa15.19■□□□□ 0.02
HPS3-201ENST00000296051 TAF4BQ92750 862 aa15.19■□□□□ 0.02
HPS3-201ENST00000296051 FPGT-TNNI3KV9GXZ4 949 aa15.19■□□□□ 0.02
HPS3-201ENST00000296051 RNF113AO15541 343 aaKnown RBP15.19■□□□□ 0.02
HPS3-201ENST00000296051 ETF1P62495 437 aaKnown RBP15.19■□□□□ 0.02
HPS3-201ENST00000296051 KIAA1468Q9P260 1216 aa15.19■□□□□ 0.02
HPS3-201ENST00000296051 ASAP1Q9ULH1 1129 aa15.19■□□□□ 0.02
HPS3-201ENST00000296051 ZBTB22O15209 634 aa15.19■□□□□ 0.02
HPS3-201ENST00000296051 POLR2DO15514 142 aaKnown RBP15.19■□□□□ 0.02
HPS3-201ENST00000296051 ALDH1B1P30837 517 aa15.19■□□□□ 0.02
HPS3-201ENST00000296051 PNOCQ13519 176 aa15.19■□□□□ 0.02
HPS3-201ENST00000296051 TTC16Q8NEE8 873 aa15.19■□□□□ 0.02
HPS3-201ENST00000296051 LUC7LQ9NQ29 371 aaKnown RBP15.19■□□□□ 0.02
HPS3-201ENST00000296051 STAP2Q9UGK3 403 aa15.19■□□□□ 0.02
HPS3-201ENST00000296051 AOX1Q06278 1338 aa15.19■□□□□ 0.02
HPS3-201ENST00000296051 ERVV-2B6SEH9 535 aa15.19■□□□□ 0.02
HPS3-201ENST00000296051 CYP2E1P05181 493 aaPredicted RBP15.19■□□□□ 0.02
HPS3-201ENST00000296051 ZSCAN26Q16670 478 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms