RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 MRPS27Q92552 414 aaKnown RBP18.4■□□□□ 0.54
NCKIPSD-201ENST00000294129 CHMP4CQ96CF2 233 aa18.4■□□□□ 0.54
NCKIPSD-201ENST00000294129 SPATA31A1Q5TZJ5 1347 aa18.4■□□□□ 0.54
NCKIPSD-201ENST00000294129 ROBO1Q9Y6N7 1651 aa18.4■□□□□ 0.54
NCKIPSD-201ENST00000294129 LINC00301Q8NCQ3 95 aa18.39■□□□□ 0.54
NCKIPSD-201ENST00000294129 ZNF512BQ96KM6 892 aaPredicted RBP18.39■□□□□ 0.54
NCKIPSD-201ENST00000294129 SLC4A4Q9Y6R1 1079 aa18.39■□□□□ 0.54
NCKIPSD-201ENST00000294129 GOLGA8AA7E2F4 631 aa18.39■□□□□ 0.53
NCKIPSD-201ENST00000294129 ZBTB43O43298 467 aa18.39■□□□□ 0.53
NCKIPSD-201ENST00000294129 CHRNDQ07001 517 aa18.39■□□□□ 0.53
NCKIPSD-201ENST00000294129 CMTR1Q8N1G2 835 aaKnown RBP18.39■□□□□ 0.53
NCKIPSD-201ENST00000294129 CCDC24Q8N4L8 307 aa18.39■□□□□ 0.53
NCKIPSD-201ENST00000294129 ZSWIM5Q9P217 1185 aa18.39■□□□□ 0.53
NCKIPSD-201ENST00000294129 MYH15Q9Y2K3 1946 aa18.39■□□□□ 0.53
NCKIPSD-201ENST00000294129 SPTLC2O15270 562 aa18.39■□□□□ 0.53
NCKIPSD-201ENST00000294129 ISM2Q6H9L7 571 aa18.39■□□□□ 0.53
NCKIPSD-201ENST00000294129 FBXL16Q8N461 479 aa18.39■□□□□ 0.53
NCKIPSD-201ENST00000294129 GTF2E1P29083 439 aaPredicted RBP18.38■□□□□ 0.53
NCKIPSD-201ENST00000294129 GYG1P46976 350 aa18.38■□□□□ 0.53
NCKIPSD-201ENST00000294129 ZNF75DP51815 510 aa18.38■□□□□ 0.53
NCKIPSD-201ENST00000294129 KIF23Q02241 960 aaPredicted RBP18.38■□□□□ 0.53
NCKIPSD-201ENST00000294129 STX1AQ16623 288 aa18.38■□□□□ 0.53
NCKIPSD-201ENST00000294129 RTEL1Q9NZ71 1219 aa18.38■□□□□ 0.53
NCKIPSD-201ENST00000294129 ZMYM6O95789 1325 aa18.38■□□□□ 0.53
NCKIPSD-201ENST00000294129 PATL2C9JE40 543 aaKnown RBP18.38■□□□□ 0.53
NCKIPSD-201ENST00000294129 ENGASEQ8NFI3 743 aa18.38■□□□□ 0.53
NCKIPSD-201ENST00000294129 SLC26A6Q9BXS9 759 aa18.38■□□□□ 0.53
NCKIPSD-201ENST00000294129 TACC3Q9Y6A5 838 aa18.38■□□□□ 0.53
NCKIPSD-201ENST00000294129 MINDY4BA8MYZ0 360 aa18.37■□□□□ 0.53
NCKIPSD-201ENST00000294129 SMIM22K7EJ46 135 aa18.37■□□□□ 0.53
NCKIPSD-201ENST00000294129 C3orf67Q6ZVT6 689 aa18.37■□□□□ 0.53
NCKIPSD-201ENST00000294129 TDRD7Q8NHU6 1098 aaKnown RBP18.37■□□□□ 0.53
NCKIPSD-201ENST00000294129 SDR42E1Q8WUS8 393 aa18.37■□□□□ 0.53
NCKIPSD-201ENST00000294129 TSC1Q92574 1164 aa18.37■□□□□ 0.53
NCKIPSD-201ENST00000294129 CLIP2Q9UDT6 1046 aa18.37■□□□□ 0.53
NCKIPSD-201ENST00000294129 MYH14Q7Z406 1995 aaKnown RBP18.37■□□□□ 0.53
NCKIPSD-201ENST00000294129 NTSR2O95665 410 aa18.37■□□□□ 0.53
NCKIPSD-201ENST00000294129 ZRSR1Q15695 479 aaKnown RBP18.37■□□□□ 0.53
NCKIPSD-201ENST00000294129 KRT40Q6A162 431 aa18.37■□□□□ 0.53
NCKIPSD-201ENST00000294129 CPLX2Q6PUV4 134 aaKnown RBP18.37■□□□□ 0.53
NCKIPSD-201ENST00000294129 RAI14Q9P0K7 980 aa18.37■□□□□ 0.53
NCKIPSD-201ENST00000294129 SLC12A7Q9Y666 1083 aa18.37■□□□□ 0.53
NCKIPSD-201ENST00000294129 COL16A1Q07092 1604 aaPredicted RBP18.37■□□□□ 0.53
NCKIPSD-201ENST00000294129 CCDC69A6NI79 296 aa18.36■□□□□ 0.53
NCKIPSD-201ENST00000294129 GSG1L2A8MUP6 293 aa18.36■□□□□ 0.53
NCKIPSD-201ENST00000294129 VPS37DQ86XT2 251 aa18.36■□□□□ 0.53
NCKIPSD-201ENST00000294129 LY9Q9HBG7 655 aa18.36■□□□□ 0.53
NCKIPSD-201ENST00000294129 IARSP41252 1262 aaKnown RBP18.36■□□□□ 0.53
NCKIPSD-201ENST00000294129 FAM98CQ17RN3 349 aaKnown RBP18.36■□□□□ 0.53
NCKIPSD-201ENST00000294129 ERFEQ4G0M1 354 aa18.36■□□□□ 0.53
NCKIPSD-201ENST00000294129 ANO1Q5XXA6 986 aa18.36■□□□□ 0.53
NCKIPSD-201ENST00000294129 ATL3Q6DD88 541 aa18.36■□□□□ 0.53
NCKIPSD-201ENST00000294129 ADALQ6DHV7 355 aa18.36■□□□□ 0.53
NCKIPSD-201ENST00000294129 MFSD6Q6ZSS7 791 aa18.36■□□□□ 0.53
NCKIPSD-201ENST00000294129 FMR1NBQ8N0W7 255 aaPredicted RBP18.36■□□□□ 0.53
NCKIPSD-201ENST00000294129 AOPEPQ8N6M6 819 aa18.36■□□□□ 0.53
NCKIPSD-201ENST00000294129 IGDCC4Q8TDY8 1250 aa18.36■□□□□ 0.53
NCKIPSD-201ENST00000294129 CTAGE5O15320 804 aa18.36■□□□□ 0.53
NCKIPSD-201ENST00000294129 CYP7A1P22680 504 aa18.36■□□□□ 0.53
NCKIPSD-201ENST00000294129 NUP133Q8WUM0 1156 aa18.36■□□□□ 0.53
NCKIPSD-201ENST00000294129 PARP10Q53GL7 1025 aa18.35■□□□□ 0.53
NCKIPSD-201ENST00000294129 KCNG4Q8TDN1 519 aa18.35■□□□□ 0.53
NCKIPSD-201ENST00000294129 RANBP6O60518 1105 aaKnown RBP18.35■□□□□ 0.53
NCKIPSD-201ENST00000294129 IQCB1Q15051 598 aa18.35■□□□□ 0.53
NCKIPSD-201ENST00000294129 KIAA1524Q8TCG1 905 aa18.35■□□□□ 0.53
NCKIPSD-201ENST00000294129 TRIM29Q14134 588 aa18.34■□□□□ 0.53
NCKIPSD-201ENST00000294129 BRAPQ7Z569 592 aa18.34■□□□□ 0.53
NCKIPSD-201ENST00000294129 ADGRA1Q86SQ6 560 aa18.34■□□□□ 0.53
NCKIPSD-201ENST00000294129 ATRNO75882 1429 aa18.34■□□□□ 0.53
NCKIPSD-201ENST00000294129 TAF1P21675 1872 aa18.34■□□□□ 0.53
NCKIPSD-201ENST00000294129 CDKL5O76039 1030 aa18.34■□□□□ 0.53
NCKIPSD-201ENST00000294129 TERF1P54274 439 aa18.34■□□□□ 0.53
NCKIPSD-201ENST00000294129 AKNAD1Q5T1N1 836 aa18.34■□□□□ 0.53
NCKIPSD-201ENST00000294129 PTF1AQ7RTS3 328 aa18.34■□□□□ 0.53
NCKIPSD-201ENST00000294129 PLA2G4DQ86XP0 818 aa18.34■□□□□ 0.53
NCKIPSD-201ENST00000294129 TMEM87BQ96K49 555 aa18.34■□□□□ 0.53
NCKIPSD-201ENST00000294129 NACAP1Q9BZK3 213 aa18.34■□□□□ 0.53
NCKIPSD-201ENST00000294129 ANO10Q9NW15 660 aa18.34■□□□□ 0.53
NCKIPSD-201ENST00000294129 ARID5BQ14865 1188 aa18.33■□□□□ 0.53
NCKIPSD-201ENST00000294129 CCDC144BQ3MJ40 725 aa18.33■□□□□ 0.53
NCKIPSD-201ENST00000294129 FILIP1Q7Z7B0 1213 aa18.33■□□□□ 0.53
NCKIPSD-201ENST00000294129 POLR3EQ9NVU0 708 aa18.33■□□□□ 0.53
NCKIPSD-201ENST00000294129 WDHD1O75717 1129 aaPredicted RBP18.33■□□□□ 0.52
NCKIPSD-201ENST00000294129 ATP2B1P20020 1258 aa18.33■□□□□ 0.52
NCKIPSD-201ENST00000294129 GUCY1A2P33402 732 aa18.33■□□□□ 0.52
NCKIPSD-201ENST00000294129 FAM182BQ5T319 152 aa18.33■□□□□ 0.52
NCKIPSD-201ENST00000294129 JAG2Q9Y219 1238 aa18.33■□□□□ 0.52
NCKIPSD-201ENST00000294129 DPCR1Q3MIW9 517 aa18.33■□□□□ 0.52
NCKIPSD-201ENST00000294129 CEP57L1Q8IYX8 460 aa18.33■□□□□ 0.52
NCKIPSD-201ENST00000294129 CLIC6Q96NY7 704 aa18.33■□□□□ 0.52
NCKIPSD-201ENST00000294129 CDCA7Q9BWT1 371 aaPredicted RBP18.33■□□□□ 0.52
NCKIPSD-201ENST00000294129 KCNJ14Q9UNX9 436 aa18.33■□□□□ 0.52
NCKIPSD-201ENST00000294129 MROH7-TTC4A0A0A0MT08 1334 aa18.32■□□□□ 0.52
NCKIPSD-201ENST00000294129 WDR19Q8NEZ3 1342 aa18.32■□□□□ 0.52
NCKIPSD-201ENST00000294129 CYP2D7A0A087X1C5 515 aa18.32■□□□□ 0.52
NCKIPSD-201ENST00000294129 ZNF202O95125 648 aa18.32■□□□□ 0.52
NCKIPSD-201ENST00000294129 YEATS4O95619 227 aa18.32■□□□□ 0.52
NCKIPSD-201ENST00000294129 PFKFB1P16118 471 aa18.32■□□□□ 0.52
NCKIPSD-201ENST00000294129 PKNOX2Q96KN3 472 aa18.32■□□□□ 0.52
NCKIPSD-201ENST00000294129 FAM217BQ9NTX9 383 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms