RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 DAGLAQ9Y4D2 1042 aa21.33■■□□□ 1
CCDC78-201ENST00000293889 EIF5BO60841 1220 aaKnown RBP21.32■■□□□ 1
CCDC78-201ENST00000293889 VEGFAP15692 232 aaPredicted RBP21.32■■□□□ 1
CCDC78-201ENST00000293889 RPS12P25398 132 aaKnown RBP21.32■■□□□ 1
CCDC78-201ENST00000293889 CRKP46108 304 aa21.32■■□□□ 1
CCDC78-201ENST00000293889 HDLBPQ00341 1268 aaKnown RBP21.32■■□□□ 1
CCDC78-201ENST00000293889 HHIPL2Q6UWX4 724 aa21.32■■□□□ 1
CCDC78-201ENST00000293889 KIAA1211Q6ZU35 1233 aa21.32■■□□□ 1
CCDC78-201ENST00000293889 DPF2Q92785 391 aa21.32■■□□□ 1
CCDC78-201ENST00000293889 LSG1Q9H089 658 aaKnown RBP21.32■■□□□ 1
CCDC78-201ENST00000293889 GPR75-ASB3A0A0A6YYF3 556 aa21.31■■□□□ 1
CCDC78-201ENST00000293889 USP17L8P0C7I0 530 aa21.31■■□□□ 1
CCDC78-201ENST00000293889 PTH1RQ03431 593 aa21.31■■□□□ 1
CCDC78-201ENST00000293889 VPS53Q5VIR6 699 aa21.31■■□□□ 1
CCDC78-201ENST00000293889 HACL1Q9UJ83 578 aa21.31■■□□□ 1
CCDC78-201ENST00000293889 SERPINA10Q9UK55 444 aa21.31■■□□□ 1
CCDC78-201ENST00000293889 KIF3CO14782 793 aa21.3■■□□□ 1
CCDC78-201ENST00000293889 BTDP43251 543 aa21.3■■□□□ 1
CCDC78-201ENST00000293889 PPP4CP60510 307 aa21.3■■□□□ 1
CCDC78-201ENST00000293889 CNOT7Q9UIV1 285 aaKnown RBP21.3■■□□□ 1
CCDC78-201ENST00000293889 IQCA1LA6NCM1 817 aa21.29■■□□□ 1
CCDC78-201ENST00000293889 BAG3O95817 575 aa21.29■■□□□ 1
CCDC78-201ENST00000293889 LMOD1P29536 600 aaPredicted RBP21.29■■□□□ 1
CCDC78-201ENST00000293889 MICALL2Q8IY33 904 aa21.29■■□□□ 1
CCDC78-201ENST00000293889 OGFOD1Q8N543 542 aa21.29■■□□□ 1
CCDC78-201ENST00000293889 ZDHHC15Q96MV8 337 aa21.29■■□□□ 1
CCDC78-201ENST00000293889 NOL10Q9BSC4 688 aaKnown RBP21.29■■□□□ 1
CCDC78-201ENST00000293889 TAF1DQ9H5J8 278 aaPredicted RBP21.29■■□□□ 1
CCDC78-201ENST00000293889 HDAC9Q9UKV0 1011 aa21.29■■□□□ 1
CCDC78-201ENST00000293889 PCDHAC2Q9Y5I4 1007 aa21.29■■□□□ 1
CCDC78-201ENST00000293889 ADAMTSL1Q8N6G6 1762 aa21.29■■□□□ 1
CCDC78-201ENST00000293889 FOXP2O15409 715 aa21.29■■□□□ 1
CCDC78-201ENST00000293889 HSPD1P10809 573 aaKnown RBP21.29■■□□□ 1
CCDC78-201ENST00000293889 EPHX2P34913 555 aa21.29■■□□□ 1
CCDC78-201ENST00000293889 APOBEC3HQ6NTF7 200 aaKnown RBP21.29■■□□□ 1
CCDC78-201ENST00000293889 USP26Q9BXU7 913 aa21.29■■□□□ 1
CCDC78-201ENST00000293889 PRKAB2O43741 272 aa21.28■■□□□ 1
CCDC78-201ENST00000293889 RBM5P52756 815 aaKnown RBP eCLIP21.28■■□□□ 1
CCDC78-201ENST00000293889 CFAP100Q494V2 611 aa21.28■■□□□ 1
CCDC78-201ENST00000293889 SH3RF3Q8TEJ3 882 aaPredicted RBP21.27■■□□□ 1
CCDC78-201ENST00000293889 MAP4K1Q92918 833 aa21.27■■□□□ 1
CCDC78-201ENST00000293889 DSCC1Q9BVC3 393 aa21.27■■□□□ 1
CCDC78-201ENST00000293889 SLC4A4Q9Y6R1 1079 aa21.27■■□□□ 1
CCDC78-201ENST00000293889 EGFRP00533 1210 aa21.26■□□□□ 0.99
CCDC78-201ENST00000293889 GNAT2P19087 354 aa21.26■□□□□ 0.99
CCDC78-201ENST00000293889 RHBDL3P58872 404 aa21.26■□□□□ 0.99
CCDC78-201ENST00000293889 ZNF280AP59817 542 aaPredicted RBP21.26■□□□□ 0.99
CCDC78-201ENST00000293889 GSG1L2A8MUP6 293 aa21.26■□□□□ 0.99
CCDC78-201ENST00000293889 PATL2C9JE40 543 aaKnown RBP21.26■□□□□ 0.99
CCDC78-201ENST00000293889 POTEIP0CG38 1075 aa21.26■□□□□ 0.99
CCDC78-201ENST00000293889 POTEJP0CG39 1038 aa21.26■□□□□ 0.99
CCDC78-201ENST00000293889 MMP14P50281 582 aa21.26■□□□□ 0.99
CCDC78-201ENST00000293889 SAMD7Q7Z3H4 446 aa21.26■□□□□ 0.99
CCDC78-201ENST00000293889 CERS3Q8IU89 383 aa21.26■□□□□ 0.99
CCDC78-201ENST00000293889 TRPM4Q8TD43 1214 aa21.26■□□□□ 0.99
CCDC78-201ENST00000293889 CRNKL1Q9BZJ0 848 aaKnown RBP21.26■□□□□ 0.99
CCDC78-201ENST00000293889 UPF2Q9HAU5 1272 aaKnown RBP21.26■□□□□ 0.99
CCDC78-201ENST00000293889 ADARB2Q9NS39 739 aaKnown RBP21.26■□□□□ 0.99
CCDC78-201ENST00000293889 H7C1D1 291 aa21.25■□□□□ 0.99
CCDC78-201ENST00000293889 EPB41L2O43491 1005 aaKnown RBP21.25■□□□□ 0.99
CCDC78-201ENST00000293889 APPP05067 770 aa21.25■□□□□ 0.99
CCDC78-201ENST00000293889 PLCG2P16885 1265 aa21.25■□□□□ 0.99
CCDC78-201ENST00000293889 CDC42EP5Q6NZY7 148 aa21.25■□□□□ 0.99
CCDC78-201ENST00000293889 SDR42E1Q8WUS8 393 aa21.25■□□□□ 0.99
CCDC78-201ENST00000293889 PRMT6Q96LA8 375 aaPredicted RBP21.25■□□□□ 0.99
CCDC78-201ENST00000293889 USP40Q9NVE5 1235 aa21.25■□□□□ 0.99
CCDC78-201ENST00000293889 DEKP35659 375 aaKnown RBP21.24■□□□□ 0.99
CCDC78-201ENST00000293889 HIRAP54198 1017 aaPredicted RBP21.24■□□□□ 0.99
CCDC78-201ENST00000293889 DLGAP5Q15398 846 aa21.24■□□□□ 0.99
CCDC78-201ENST00000293889 MTMR14Q8NCE2 650 aa21.24■□□□□ 0.99
CCDC78-201ENST00000293889 MYOZ2Q9NPC6 264 aa21.24■□□□□ 0.99
CCDC78-201ENST00000293889 RBM8AQ9Y5S9 174 aaKnown RBP21.24■□□□□ 0.99
CCDC78-201ENST00000293889 SPDYE2BA6NHP3 402 aa21.23■□□□□ 0.99
CCDC78-201ENST00000293889 SPDYE6P0CI01 402 aa21.23■□□□□ 0.99
CCDC78-201ENST00000293889 TBC1D10BQ4KMP7 808 aaPredicted RBP21.23■□□□□ 0.99
CCDC78-201ENST00000293889 TEX11Q8IYF3 940 aa21.23■□□□□ 0.99
CCDC78-201ENST00000293889 EPB41L4AQ9HCS5 686 aaPredicted RBP21.23■□□□□ 0.99
CCDC78-201ENST00000293889 U3KPZ7 1027 aaPredicted RBP21.23■□□□□ 0.99
CCDC78-201ENST00000293889 FGAP02671 866 aa21.22■□□□□ 0.99
CCDC78-201ENST00000293889 EAPPQ56P03 285 aaPredicted RBP21.22■□□□□ 0.99
CCDC78-201ENST00000293889 RBM26Q5T8P6 1007 aaKnown RBP21.22■□□□□ 0.99
CCDC78-201ENST00000293889 IFNL3Q8IZI9 196 aa21.22■□□□□ 0.99
CCDC78-201ENST00000293889 ZBED3Q96IU2 234 aaPredicted RBP21.22■□□□□ 0.99
CCDC78-201ENST00000293889 C22orf23Q9BZE7 217 aa21.22■□□□□ 0.99
CCDC78-201ENST00000293889 POLR2AP24928 1970 aaKnown RBP21.22■□□□□ 0.99
CCDC78-201ENST00000293889 RPAP1Q9BWH6 1393 aaPredicted RBP21.22■□□□□ 0.99
CCDC78-201ENST00000293889 ALX1Q15699 326 aa21.22■□□□□ 0.99
CCDC78-201ENST00000293889 USP50Q70EL3 339 aaPredicted RBP21.22■□□□□ 0.99
CCDC78-201ENST00000293889 PNMA8AQ86V59 439 aaPredicted RBP21.22■□□□□ 0.99
CCDC78-201ENST00000293889 TDRD3Q9H7E2 651 aaKnown RBP21.22■□□□□ 0.99
CCDC78-201ENST00000293889 ECM29Q5VYK3 1845 aa21.21■□□□□ 0.99
CCDC78-201ENST00000293889 USP5P45974 858 aa21.21■□□□□ 0.99
CCDC78-201ENST00000293889 NECTIN1Q15223 517 aa21.21■□□□□ 0.99
CCDC78-201ENST00000293889 KIF4BQ2VIQ3 1234 aa21.21■□□□□ 0.99
CCDC78-201ENST00000293889 TGFBRAP1Q8WUH2 860 aa21.21■□□□□ 0.99
CCDC78-201ENST00000293889 NACAP1Q9BZK3 213 aa21.21■□□□□ 0.99
CCDC78-201ENST00000293889 DCP1AQ9NPI6 582 aaPredicted RBP21.21■□□□□ 0.99
CCDC78-201ENST00000293889 WDHD1O75717 1129 aaPredicted RBP21.2■□□□□ 0.98
CCDC78-201ENST00000293889 HSPA4P34932 840 aa21.2■□□□□ 0.98
CCDC78-201ENST00000293889 NBR1Q14596 966 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms