RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 CACNB3P54284 484 aa12.12□□□□□ -0.47
CCDC58-201ENST00000291458 FKBP1AP62942 108 aaKnown RBP12.12□□□□□ -0.47
CCDC58-201ENST00000291458 OS9Q13438 667 aaPredicted RBP12.12□□□□□ -0.47
CCDC58-201ENST00000291458 TNS4Q8IZW8 715 aa12.12□□□□□ -0.47
CCDC58-201ENST00000291458 COPRSQ9NQ92 184 aa12.12□□□□□ -0.47
CCDC58-201ENST00000291458 SSC5DA1L4H1 1573 aa12.12□□□□□ -0.47
CCDC58-201ENST00000291458 AKAP11Q9UKA4 1901 aa12.11□□□□□ -0.47
CCDC58-201ENST00000291458 RASAL3Q86YV0 1011 aa12.11□□□□□ -0.47
CCDC58-201ENST00000291458 YTHDC1Q96MU7 727 aaKnown RBP12.11□□□□□ -0.47
CCDC58-201ENST00000291458 NEUROD6Q96NK8 337 aa12.11□□□□□ -0.47
CCDC58-201ENST00000291458 BCL11AQ9H165 835 aa12.11□□□□□ -0.47
CCDC58-201ENST00000291458 DEFB129Q9H1M3 183 aa12.11□□□□□ -0.47
CCDC58-201ENST00000291458 ANGEL1Q9UNK9 670 aaKnown RBP12.11□□□□□ -0.47
CCDC58-201ENST00000291458 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.11□□□□□ -0.47
CCDC58-201ENST00000291458 AK9Q5TCS8 1911 aa12.11□□□□□ -0.47
CCDC58-201ENST00000291458 MYH2Q9UKX2 1941 aa12.1□□□□□ -0.47
CCDC58-201ENST00000291458 FAM155AB1AL88 458 aaPredicted RBP12.1□□□□□ -0.47
CCDC58-201ENST00000291458 SLC10A3P09131 477 aa12.1□□□□□ -0.47
CCDC58-201ENST00000291458 NOGQ13253 232 aa12.1□□□□□ -0.47
CCDC58-201ENST00000291458 CDAN1Q8IWY9 1227 aa12.1□□□□□ -0.47
CCDC58-201ENST00000291458 TBC1D22AQ8WUA7 517 aa12.1□□□□□ -0.47
CCDC58-201ENST00000291458 TEKT1Q969V4 418 aa12.1□□□□□ -0.47
CCDC58-201ENST00000291458 HHIPL1Q96JK4 782 aa12.1□□□□□ -0.47
CCDC58-201ENST00000291458 GNL3LQ9NVN8 582 aaKnown RBP12.1□□□□□ -0.47
CCDC58-201ENST00000291458 ZNF70Q9UC06 446 aaPredicted RBP12.1□□□□□ -0.47
CCDC58-201ENST00000291458 CASP8AP2Q9UKL3 1982 aa12.09□□□□□ -0.47
CCDC58-201ENST00000291458 A0A1B0GUL7 405 aa12.09□□□□□ -0.47
CCDC58-201ENST00000291458 PRDX5P30044 214 aa12.09□□□□□ -0.47
CCDC58-201ENST00000291458 TIMM10P62072 90 aa12.09□□□□□ -0.47
CCDC58-201ENST00000291458 KIF23Q02241 960 aaPredicted RBP12.09□□□□□ -0.47
CCDC58-201ENST00000291458 G3BP1Q13283 466 aaKnown RBP eCLIP12.09□□□□□ -0.47
CCDC58-201ENST00000291458 MTX1Q13505 466 aa12.09□□□□□ -0.47
CCDC58-201ENST00000291458 RASA3Q14644 834 aa12.09□□□□□ -0.47
CCDC58-201ENST00000291458 DIXDC1Q155Q3 683 aa12.09□□□□□ -0.47
CCDC58-201ENST00000291458 MTMR14Q8NCE2 650 aa12.09□□□□□ -0.47
CCDC58-201ENST00000291458 SERPINA10Q9UK55 444 aa12.09□□□□□ -0.47
CCDC58-201ENST00000291458 MAP2K2P36507 400 aa12.08□□□□□ -0.48
CCDC58-201ENST00000291458 MMP14P50281 582 aa12.08□□□□□ -0.48
CCDC58-201ENST00000291458 RASGRF1Q13972 1273 aa12.08□□□□□ -0.48
CCDC58-201ENST00000291458 GORABQ5T7V8 394 aa12.08□□□□□ -0.48
CCDC58-201ENST00000291458 NBPF12Q5TAG4 269 aaPredicted RBP12.08□□□□□ -0.48
CCDC58-201ENST00000291458 CCDC102BQ68D86 513 aa12.08□□□□□ -0.48
CCDC58-201ENST00000291458 PI16Q6UXB8 463 aa12.08□□□□□ -0.48
CCDC58-201ENST00000291458 ARMC9Q7Z3E5 817 aa12.08□□□□□ -0.48
CCDC58-201ENST00000291458 CCDC102AQ96A19 550 aa12.08□□□□□ -0.48
CCDC58-201ENST00000291458 XAGE2Q96GT9 111 aa12.08□□□□□ -0.48
CCDC58-201ENST00000291458 TMEM39BQ9GZU3 492 aa12.08□□□□□ -0.48
CCDC58-201ENST00000291458 TMOD2Q9NZR1 351 aa12.08□□□□□ -0.48
CCDC58-201ENST00000291458 RCAN3Q9UKA8 241 aa12.08□□□□□ -0.48
CCDC58-201ENST00000291458 COG6Q9Y2V7 657 aa12.08□□□□□ -0.48
CCDC58-201ENST00000291458 MAST3O60307 1309 aa12.08□□□□□ -0.48
CCDC58-201ENST00000291458 FKBP1BP68106 108 aa12.07□□□□□ -0.48
CCDC58-201ENST00000291458 TNFAIP1Q13829 316 aa12.07□□□□□ -0.48
CCDC58-201ENST00000291458 IFFO2Q5TF58 517 aa12.07□□□□□ -0.48
CCDC58-201ENST00000291458 WDR66Q8TBY9 1149 aa12.07□□□□□ -0.48
CCDC58-201ENST00000291458 ABCF2Q9UG63 623 aa12.07□□□□□ -0.48
CCDC58-201ENST00000291458 AKAP2Q9Y2D5 859 aa12.07□□□□□ -0.48
CCDC58-201ENST00000291458 APBB1O00213 710 aa12.06□□□□□ -0.48
CCDC58-201ENST00000291458 SURF6O75683 361 aaKnown RBP12.06□□□□□ -0.48
CCDC58-201ENST00000291458 LDHBP07195 334 aaKnown RBP12.06□□□□□ -0.48
CCDC58-201ENST00000291458 MVPQ14764 893 aaKnown RBP12.06□□□□□ -0.48
CCDC58-201ENST00000291458 DZIP1Q86YF9 867 aaKnown RBP12.06□□□□□ -0.48
CCDC58-201ENST00000291458 CLMNQ96JQ2 1002 aa12.06□□□□□ -0.48
CCDC58-201ENST00000291458 DENND2AQ9ULE3 1009 aa12.06□□□□□ -0.48
CCDC58-201ENST00000291458 DAGLAQ9Y4D2 1042 aa12.06□□□□□ -0.48
CCDC58-201ENST00000291458 PPP2R3BQ9Y5P8 575 aa12.06□□□□□ -0.48
CCDC58-201ENST00000291458 MYO5AQ9Y4I1 1855 aaKnown RBP12.06□□□□□ -0.48
CCDC58-201ENST00000291458 MAST2Q6P0Q8 1798 aa12.05□□□□□ -0.48
CCDC58-201ENST00000291458 DOCK2Q92608 1830 aa12.05□□□□□ -0.48
CCDC58-201ENST00000291458 POTEB2H3BUK9 544 aa12.05□□□□□ -0.48
CCDC58-201ENST00000291458 PPP1R12BO60237 982 aaPredicted RBP12.05□□□□□ -0.48
CCDC58-201ENST00000291458 TRPA1O75762 1119 aa12.05□□□□□ -0.48
CCDC58-201ENST00000291458 TNNI2P48788 182 aa12.05□□□□□ -0.48
CCDC58-201ENST00000291458 TCP10Q12799 353 aa12.05□□□□□ -0.48
CCDC58-201ENST00000291458 PRDM10Q9NQV6 1147 aa12.05□□□□□ -0.48
CCDC58-201ENST00000291458 EXOC6BQ9Y2D4 811 aa12.05□□□□□ -0.48
CCDC58-201ENST00000291458 BOLA1Q9Y3E2 137 aa12.05□□□□□ -0.48
CCDC58-201ENST00000291458 ZBTB7BO15156 539 aaPredicted RBP12.04□□□□□ -0.48
CCDC58-201ENST00000291458 PPP1R37O75864 691 aa12.04□□□□□ -0.48
CCDC58-201ENST00000291458 IREB2P48200 963 aaKnown RBP12.04□□□□□ -0.48
CCDC58-201ENST00000291458 ATP8B2P98198 1209 aa12.04□□□□□ -0.48
CCDC58-201ENST00000291458 SUPT20HL1Q3ZLR7 823 aa12.04□□□□□ -0.48
CCDC58-201ENST00000291458 TTC39AQ5SRH9 613 aa12.04□□□□□ -0.48
CCDC58-201ENST00000291458 C20orf194Q5TEA3 1177 aa12.04□□□□□ -0.48
CCDC58-201ENST00000291458 LHX8Q68G74 356 aa12.04□□□□□ -0.48
CCDC58-201ENST00000291458 APOBEC3HQ6NTF7 200 aaKnown RBP12.04□□□□□ -0.48
CCDC58-201ENST00000291458 CEP85Q6P2H3 762 aa12.04□□□□□ -0.48
CCDC58-201ENST00000291458 ZDHHC15Q96MV8 337 aa12.04□□□□□ -0.48
CCDC58-201ENST00000291458 CSRNP1Q96S65 589 aa12.04□□□□□ -0.48
CCDC58-201ENST00000291458 ELP3Q9H9T3 547 aa12.04□□□□□ -0.48
CCDC58-201ENST00000291458 SNRKQ9NRH2 765 aa12.04□□□□□ -0.48
CCDC58-201ENST00000291458 SEMA3EO15041 775 aa12.03□□□□□ -0.48
CCDC58-201ENST00000291458 HDLBPQ00341 1268 aaKnown RBP12.03□□□□□ -0.48
CCDC58-201ENST00000291458 TNNI3KQ59H18 835 aa12.03□□□□□ -0.48
CCDC58-201ENST00000291458 TBC1D9Q6ZT07 1266 aa12.03□□□□□ -0.48
CCDC58-201ENST00000291458 SSH3Q8TE77 659 aa12.03□□□□□ -0.48
CCDC58-201ENST00000291458 DBNDD2Q9BQY9 259 aa12.03□□□□□ -0.48
CCDC58-201ENST00000291458 RNF186Q9NXI6 227 aa12.03□□□□□ -0.48
CCDC58-201ENST00000291458 TLR7Q9NYK1 1049 aaKnown RBP12.03□□□□□ -0.48
CCDC58-201ENST00000291458 SUGT1Q9Y2Z0 365 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms