RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 WDR66Q8TBY9 1149 aa11.32□□□□□ -0.6
HMGN1-201ENST00000288344 HHIPL1Q96JK4 782 aa11.32□□□□□ -0.6
HMGN1-201ENST00000288344 ZDHHC15Q96MV8 337 aa11.32□□□□□ -0.6
HMGN1-201ENST00000288344 DBNDD2Q9BQY9 259 aa11.32□□□□□ -0.6
HMGN1-201ENST00000288344 DCTPP1Q9H773 170 aa11.32□□□□□ -0.6
HMGN1-201ENST00000288344 DENND2AQ9ULE3 1009 aa11.32□□□□□ -0.6
HMGN1-201ENST00000288344 TTF2Q9UNY4 1162 aaKnown RBP11.32□□□□□ -0.6
HMGN1-201ENST00000288344 SCAF8Q9UPN6 1271 aaKnown RBP11.32□□□□□ -0.6
HMGN1-201ENST00000288344 EXOC6BQ9Y2D4 811 aa11.32□□□□□ -0.6
HMGN1-201ENST00000288344 TLL2Q9Y6L7 1015 aa11.32□□□□□ -0.6
HMGN1-201ENST00000288344 ECM29Q5VYK3 1845 aa11.31□□□□□ -0.6
HMGN1-201ENST00000288344 CNTNAP1P78357 1384 aa11.31□□□□□ -0.6
HMGN1-201ENST00000288344 PRDX5P30044 214 aa11.31□□□□□ -0.6
HMGN1-201ENST00000288344 MCAMP43121 646 aa11.31□□□□□ -0.6
HMGN1-201ENST00000288344 CRKP46108 304 aa11.31□□□□□ -0.6
HMGN1-201ENST00000288344 VPS37DQ86XT2 251 aa11.31□□□□□ -0.6
HMGN1-201ENST00000288344 RHPN1Q8TCX5 695 aa11.31□□□□□ -0.6
HMGN1-201ENST00000288344 DCPSQ96C86 337 aaKnown RBP11.31□□□□□ -0.6
HMGN1-201ENST00000288344 TEPSINQ96N21 525 aa11.31□□□□□ -0.6
HMGN1-201ENST00000288344 CHMP4BQ9H444 224 aaKnown RBP11.31□□□□□ -0.6
HMGN1-201ENST00000288344 TLR7Q9NYK1 1049 aaKnown RBP11.31□□□□□ -0.6
HMGN1-201ENST00000288344 HDAC9Q9UKV0 1011 aa11.31□□□□□ -0.6
HMGN1-201ENST00000288344 MYH13Q9UKX3 1938 aa11.3□□□□□ -0.6
HMGN1-201ENST00000288344 F8W031 263 aaPredicted RBP11.3□□□□□ -0.6
HMGN1-201ENST00000288344 CHAF1AQ13111 956 aaPredicted RBP11.3□□□□□ -0.6
HMGN1-201ENST00000288344 DLGAP5Q15398 846 aa11.3□□□□□ -0.6
HMGN1-201ENST00000288344 PI16Q6UXB8 463 aa11.3□□□□□ -0.6
HMGN1-201ENST00000288344 MAMSTRQ6ZN01 415 aa11.3□□□□□ -0.6
HMGN1-201ENST00000288344 FBXW7Q969H0 707 aa11.3□□□□□ -0.6
HMGN1-201ENST00000288344 CDCA5Q96FF9 252 aa11.3□□□□□ -0.6
HMGN1-201ENST00000288344 ZNF70Q9UC06 446 aaPredicted RBP11.3□□□□□ -0.6
HMGN1-201ENST00000288344 GAKO14976 1311 aa11.3□□□□□ -0.6
HMGN1-201ENST00000288344 SSC5DA1L4H1 1573 aa11.29□□□□□ -0.6
HMGN1-201ENST00000288344 CELF2O95319 508 aaKnown RBP11.29□□□□□ -0.6
HMGN1-201ENST00000288344 VEGFBP49765 207 aa11.29□□□□□ -0.6
HMGN1-201ENST00000288344 E2F4Q16254 413 aa11.29□□□□□ -0.6
HMGN1-201ENST00000288344 FKBP1CQ5VVH2 108 aa11.29□□□□□ -0.6
HMGN1-201ENST00000288344 PRAMEF18Q5VWM3 479 aa11.29□□□□□ -0.6
HMGN1-201ENST00000288344 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.29□□□□□ -0.6
HMGN1-201ENST00000288344 SULF1Q8IWU6 871 aa11.29□□□□□ -0.6
HMGN1-201ENST00000288344 SPATA5Q8NB90 893 aa11.29□□□□□ -0.6
HMGN1-201ENST00000288344 NEUROD6Q96NK8 337 aa11.29□□□□□ -0.6
HMGN1-201ENST00000288344 CRBNQ96SW2 442 aa11.29□□□□□ -0.6
HMGN1-201ENST00000288344 CRISPLD2Q9H0B8 497 aa11.29□□□□□ -0.6
HMGN1-201ENST00000288344 DEFB129Q9H1M3 183 aa11.29□□□□□ -0.6
HMGN1-201ENST00000288344 GNL3LQ9NVN8 582 aaKnown RBP11.29□□□□□ -0.6
HMGN1-201ENST00000288344 MYO5AQ9Y4I1 1855 aaKnown RBP11.28□□□□□ -0.6
HMGN1-201ENST00000288344 FAM155AB1AL88 458 aaPredicted RBP11.28□□□□□ -0.6
HMGN1-201ENST00000288344 RAB11FIP3O75154 756 aa11.28□□□□□ -0.6
HMGN1-201ENST00000288344 CYP2E1P05181 493 aaPredicted RBP11.28□□□□□ -0.6
HMGN1-201ENST00000288344 MAP3K11Q16584 847 aa11.28□□□□□ -0.6
HMGN1-201ENST00000288344 DEFB115Q30KQ5 88 aa11.28□□□□□ -0.6
HMGN1-201ENST00000288344 HSP90AB4PQ58FF6 505 aa11.28□□□□□ -0.6
HMGN1-201ENST00000288344 LDLRAD1Q5T700 205 aa11.28□□□□□ -0.6
HMGN1-201ENST00000288344 ERC1Q8IUD2 1116 aa11.28□□□□□ -0.6
HMGN1-201ENST00000288344 CDAN1Q8IWY9 1227 aa11.28□□□□□ -0.6
HMGN1-201ENST00000288344 CCDC8Q9H0W5 538 aaPredicted RBP11.28□□□□□ -0.6
HMGN1-201ENST00000288344 TDRD3Q9H7E2 651 aaKnown RBP11.28□□□□□ -0.6
HMGN1-201ENST00000288344 SCUBE2Q9NQ36 999 aa11.28□□□□□ -0.6
HMGN1-201ENST00000288344 DAGLAQ9Y4D2 1042 aa11.28□□□□□ -0.6
HMGN1-201ENST00000288344 UQCRFS1P1P0C7P4 283 aa11.27□□□□□ -0.61
HMGN1-201ENST00000288344 MFSD10Q14728 455 aa11.27□□□□□ -0.61
HMGN1-201ENST00000288344 DIXDC1Q155Q3 683 aa11.27□□□□□ -0.61
HMGN1-201ENST00000288344 TBC1D9Q6ZT07 1266 aa11.27□□□□□ -0.61
HMGN1-201ENST00000288344 APOBEC3FQ8IUX4 373 aaKnown RBP11.27□□□□□ -0.61
HMGN1-201ENST00000288344 TEKT1Q969V4 418 aa11.27□□□□□ -0.61
HMGN1-201ENST00000288344 NSUN4Q96CB9 384 aaKnown RBP11.27□□□□□ -0.61
HMGN1-201ENST00000288344 KIF1BPQ96EK5 621 aa11.27□□□□□ -0.61
HMGN1-201ENST00000288344 LARP6Q9BRS8 491 aaKnown RBP11.27□□□□□ -0.61
HMGN1-201ENST00000288344 MYH2Q9UKX2 1941 aa11.26□□□□□ -0.61
HMGN1-201ENST00000288344 RFX7Q2KHR2 1363 aa11.26□□□□□ -0.61
HMGN1-201ENST00000288344 GPR75-ASB3A0A0A6YYF3 556 aa11.26□□□□□ -0.61
HMGN1-201ENST00000288344 CLRN2A0PK11 232 aa11.26□□□□□ -0.61
HMGN1-201ENST00000288344 IGSF3O75054 1194 aa11.26□□□□□ -0.61
HMGN1-201ENST00000288344 HMMRO75330 724 aa11.26□□□□□ -0.61
HMGN1-201ENST00000288344 FRAT2O75474 233 aaPredicted RBP11.26□□□□□ -0.61
HMGN1-201ENST00000288344 RHBDL3P58872 404 aa11.26□□□□□ -0.61
HMGN1-201ENST00000288344 FKBP1BP68106 108 aa11.26□□□□□ -0.61
HMGN1-201ENST00000288344 RASA3Q14644 834 aa11.26□□□□□ -0.61
HMGN1-201ENST00000288344 CDC42EP5Q6NZY7 148 aa11.26□□□□□ -0.61
HMGN1-201ENST00000288344 MOB2Q70IA6 237 aa11.26□□□□□ -0.61
HMGN1-201ENST00000288344 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.26□□□□□ -0.61
HMGN1-201ENST00000288344 ZIC5Q96T25 663 aa11.26□□□□□ -0.61
HMGN1-201ENST00000288344 GBA2Q9HCG7 927 aaPredicted RBP11.26□□□□□ -0.61
HMGN1-201ENST00000288344 IL1RAPL2Q9NP60 686 aa11.26□□□□□ -0.61
HMGN1-201ENST00000288344 FAM198AQ9UFP1 575 aa11.26□□□□□ -0.61
HMGN1-201ENST00000288344 MKRN1Q9UHC7 482 aaKnown RBP11.26□□□□□ -0.61
HMGN1-201ENST00000288344 PPP2R3BQ9Y5P8 575 aa11.26□□□□□ -0.61
HMGN1-201ENST00000288344 THSD7BQ9C0I4 1608 aa11.26□□□□□ -0.61
HMGN1-201ENST00000288344 USP2O75604 605 aaPredicted RBP11.25□□□□□ -0.61
HMGN1-201ENST00000288344 LDHBP07195 334 aaKnown RBP11.25□□□□□ -0.61
HMGN1-201ENST00000288344 MAP3K10Q02779 954 aa11.25□□□□□ -0.61
HMGN1-201ENST00000288344 MECOMQ03112 1051 aa11.25□□□□□ -0.61
HMGN1-201ENST00000288344 HDAC1Q13547 482 aaPredicted RBP11.25□□□□□ -0.61
HMGN1-201ENST00000288344 NBPF12Q5TAG4 269 aaPredicted RBP11.25□□□□□ -0.61
HMGN1-201ENST00000288344 FAM83AQ86UY5 434 aa11.25□□□□□ -0.61
HMGN1-201ENST00000288344 ZGPATQ8N5A5 531 aaKnown RBP11.25□□□□□ -0.61
HMGN1-201ENST00000288344 IDI2Q9BXS1 227 aa11.25□□□□□ -0.61
HMGN1-201ENST00000288344 SUPT16HQ9Y5B9 1047 aaKnown RBP11.25□□□□□ -0.61
HMGN1-201ENST00000288344 MAST3O60307 1309 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms