RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 PDCD7Q8N8D1 485 aaKnown RBP9.74□□□□□ -0.85
NIPBL-201ENST00000282516 TRIM4Q9C037 500 aa9.74□□□□□ -0.85
NIPBL-201ENST00000282516 ZKSCAN5Q9Y2L8 839 aa9.74□□□□□ -0.85
NIPBL-201ENST00000282516 NSD2O96028 1365 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 MARCKSP29966 332 aaPredicted RBP9.73□□□□□ -0.85
NIPBL-201ENST00000282516 IQUBQ8NA54 791 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 DHX58Q96C10 678 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 ELP1O95163 1332 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 KMT5BQ4FZB7 885 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 CDAN1Q8IWY9 1227 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 DNAJC25Q9H1X3 360 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 TTF2Q9UNY4 1162 aaKnown RBP9.73□□□□□ -0.85
NIPBL-201ENST00000282516 PHEXP78562 749 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 NAIPQ13075 1403 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 CFTRP13569 1480 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 CYP26C1Q6V0L0 522 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 OGFOD1Q8N543 542 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 DRC3Q9H069 523 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 EXOC7Q9UPT5 735 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 CTNND2Q9UQB3 1225 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 RAD50Q92878 1312 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 CNNM4Q6P4Q7 775 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 SYNRGQ9UMZ2 1314 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 RPS6KA2Q15349 733 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 UBE3BQ7Z3V4 1068 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 PNMA8AQ86V59 439 aaPredicted RBP9.73□□□□□ -0.85
NIPBL-201ENST00000282516 BAG1Q99933 345 aaPredicted RBP9.73□□□□□ -0.85
NIPBL-201ENST00000282516 PAK2Q13177 524 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 ATP2B3Q16720 1220 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 BACH1O14867 736 aa9.73□□□□□ -0.85
NIPBL-201ENST00000282516 EIF2AQ9BY44 585 aaKnown RBP9.73□□□□□ -0.85
NIPBL-201ENST00000282516 ERO1AQ96HE7 468 aa9.72□□□□□ -0.85
NIPBL-201ENST00000282516 NACA2Q9H009 215 aa9.72□□□□□ -0.85
NIPBL-201ENST00000282516 MAP3K2Q9Y2U5 619 aa9.72□□□□□ -0.85
NIPBL-201ENST00000282516 RALGAPBQ86X10 1494 aa9.72□□□□□ -0.85
NIPBL-201ENST00000282516 RARSP54136 660 aaKnown RBP9.72□□□□□ -0.85
NIPBL-201ENST00000282516 CXorf38Q8TB03 319 aa9.72□□□□□ -0.85
NIPBL-201ENST00000282516 ASIC3Q9UHC3 531 aa9.72□□□□□ -0.85
NIPBL-201ENST00000282516 CALUO43852 315 aaPredicted RBP9.72□□□□□ -0.85
NIPBL-201ENST00000282516 KIF11P52732 1056 aa9.72□□□□□ -0.85
NIPBL-201ENST00000282516 CASC4Q6P4E1 433 aa9.72□□□□□ -0.85
NIPBL-201ENST00000282516 FNBP1Q96RU3 617 aa9.72□□□□□ -0.85
NIPBL-201ENST00000282516 SPC25Q9HBM1 224 aa9.72□□□□□ -0.85
NIPBL-201ENST00000282516 PPFIA4O75335 1185 aa9.72□□□□□ -0.85
NIPBL-201ENST00000282516 USP48Q86UV5 1035 aa9.72□□□□□ -0.85
NIPBL-201ENST00000282516 FAF1Q9UNN5 650 aaPredicted RBP9.72□□□□□ -0.85
NIPBL-201ENST00000282516 MAP2K2P36507 400 aa9.72□□□□□ -0.85
NIPBL-201ENST00000282516 ATL3Q6DD88 541 aa9.72□□□□□ -0.85
NIPBL-201ENST00000282516 ANKRD20A3Q5VUR7 823 aa9.72□□□□□ -0.85
NIPBL-201ENST00000282516 ZKSCAN3Q9BRR0 538 aa9.72□□□□□ -0.85
NIPBL-201ENST00000282516 ZMAT2Q96NC0 199 aaKnown RBP9.72□□□□□ -0.85
NIPBL-201ENST00000282516 PALM3A6NDB9 673 aaPredicted RBP9.72□□□□□ -0.85
NIPBL-201ENST00000282516 F13A1P00488 732 aa9.72□□□□□ -0.85
NIPBL-201ENST00000282516 IFNKQ9P0W0 207 aa9.72□□□□□ -0.85
NIPBL-201ENST00000282516 SLC4A4Q9Y6R1 1079 aa9.72□□□□□ -0.85
NIPBL-201ENST00000282516 EVCP57679 992 aa9.71□□□□□ -0.85
NIPBL-201ENST00000282516 LARSQ9P2J5 1176 aaKnown RBP9.71□□□□□ -0.85
NIPBL-201ENST00000282516 ATAD2BQ9ULI0 1458 aa9.71□□□□□ -0.85
NIPBL-201ENST00000282516 ZC3H6P61129 1189 aaKnown RBP9.71□□□□□ -0.85
NIPBL-201ENST00000282516 SMAP1Q8IYB5 467 aaPredicted RBP9.71□□□□□ -0.85
NIPBL-201ENST00000282516 BRF1Q92994 677 aa9.71□□□□□ -0.85
NIPBL-201ENST00000282516 TBC1D32Q96NH3 1257 aa9.71□□□□□ -0.85
NIPBL-201ENST00000282516 SH2D4AQ9H788 454 aa9.71□□□□□ -0.85
NIPBL-201ENST00000282516 TROVE2P10155 538 aaKnown RBP eCLIP9.71□□□□□ -0.85
NIPBL-201ENST00000282516 IRX5P78411 483 aaPredicted RBP9.71□□□□□ -0.85
NIPBL-201ENST00000282516 CDR2Q01850 454 aa9.71□□□□□ -0.85
NIPBL-201ENST00000282516 BRDTQ58F21 947 aaPredicted RBP9.71□□□□□ -0.85
NIPBL-201ENST00000282516 MPRIPQ6WCQ1 1025 aa9.71□□□□□ -0.85
NIPBL-201ENST00000282516 ZC4H2Q9NQZ6 224 aa9.71□□□□□ -0.85
NIPBL-201ENST00000282516 TMOD4Q9NZQ9 345 aa9.71□□□□□ -0.85
NIPBL-201ENST00000282516 OPHN1O60890 802 aa9.71□□□□□ -0.86
NIPBL-201ENST00000282516 FLOT1O75955 427 aa9.71□□□□□ -0.86
NIPBL-201ENST00000282516 PHBP35232 272 aa9.71□□□□□ -0.86
NIPBL-201ENST00000282516 KRT9P35527 623 aa9.71□□□□□ -0.86
NIPBL-201ENST00000282516 GABPB1Q06547 395 aaPredicted RBP9.71□□□□□ -0.86
NIPBL-201ENST00000282516 CCDC93Q567U6 631 aa9.71□□□□□ -0.86
NIPBL-201ENST00000282516 AKNAD1Q5T1N1 836 aa9.71□□□□□ -0.86
NIPBL-201ENST00000282516 GOLGA8QA0A0J9YX86 632 aa9.71□□□□□ -0.86
NIPBL-201ENST00000282516 GOLGA8OA6NCC3 632 aa9.71□□□□□ -0.86
NIPBL-201ENST00000282516 GOLGA8NF8WBI6 632 aa9.71□□□□□ -0.86
NIPBL-201ENST00000282516 LRRC43Q8N309 656 aa9.71□□□□□ -0.86
NIPBL-201ENST00000282516 ASIC2Q16515 512 aa9.71□□□□□ -0.86
NIPBL-201ENST00000282516 CCDC124Q96CT7 223 aaKnown RBP9.71□□□□□ -0.86
NIPBL-201ENST00000282516 NPHP3Q7Z494 1330 aa9.71□□□□□ -0.86
NIPBL-201ENST00000282516 CYP7A1P22680 504 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 HSP90AA5PQ58FG0 334 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 SPATS2Q86XZ4 545 aaKnown RBP9.7□□□□□ -0.86
NIPBL-201ENST00000282516 PLCD1P51178 756 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 ARHGAP4P98171 946 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 RBSNQ9H1K0 784 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 ZNF219Q9P2Y4 722 aaPredicted RBP9.7□□□□□ -0.86
NIPBL-201ENST00000282516 PARP2Q9UGN5 583 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 RNF40O75150 1001 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 SLC8A1P32418 973 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 ARHGAP42A6NI28 874 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 TNFAIP3P21580 790 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 GCKP35557 465 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 YWHAEP62258 255 aaKnown RBP9.7□□□□□ -0.86
NIPBL-201ENST00000282516 LDHAL6AQ6ZMR3 332 aa9.7□□□□□ -0.86
NIPBL-201ENST00000282516 DTHD1Q6ZMT9 781 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms