RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 ZKSCAN3Q9BRR0 538 aa13.92□□□□□ -0.18
SSRP1-201ENST00000278412 TM6SF1Q9BZW5 370 aa13.92□□□□□ -0.18
SSRP1-201ENST00000278412 MYH2Q9UKX2 1941 aa13.92□□□□□ -0.18
SSRP1-201ENST00000278412 ZNF213O14771 459 aa13.91□□□□□ -0.18
SSRP1-201ENST00000278412 TDO2P48775 406 aa13.91□□□□□ -0.18
SSRP1-201ENST00000278412 NAPBQ9H115 298 aa13.91□□□□□ -0.18
SSRP1-201ENST00000278412 NCOA5Q9HCD5 579 aaKnown RBP13.91□□□□□ -0.18
SSRP1-201ENST00000278412 LIMCH1Q9UPQ0 1083 aa13.91□□□□□ -0.18
SSRP1-201ENST00000278412 ZDHHC9Q9Y397 364 aa13.91□□□□□ -0.18
SSRP1-201ENST00000278412 SEMA3EO15041 775 aa13.91□□□□□ -0.18
SSRP1-201ENST00000278412 IMMTQ16891 758 aaKnown RBP13.91□□□□□ -0.18
SSRP1-201ENST00000278412 RRP12Q5JTH9 1297 aaKnown RBP13.91□□□□□ -0.18
SSRP1-201ENST00000278412 C15orf52Q6ZUT6 534 aaKnown RBP13.91□□□□□ -0.18
SSRP1-201ENST00000278412 NAP1L2Q9ULW6 460 aaPredicted RBP13.91□□□□□ -0.18
SSRP1-201ENST00000278412 SNED1Q8TER0 1413 aa13.91□□□□□ -0.18
SSRP1-201ENST00000278412 RXRAP19793 462 aa13.91□□□□□ -0.18
SSRP1-201ENST00000278412 HMGB2P26583 209 aaKnown RBP13.91□□□□□ -0.18
SSRP1-201ENST00000278412 ZNF277Q9NRM2 450 aaPredicted RBP13.91□□□□□ -0.18
SSRP1-201ENST00000278412 EXOSC10Q01780 885 aaKnown RBP13.9□□□□□ -0.18
SSRP1-201ENST00000278412 NLGN2Q8NFZ4 835 aa13.9□□□□□ -0.18
SSRP1-201ENST00000278412 CCDC88AQ3V6T2 1871 aa13.9□□□□□ -0.18
SSRP1-201ENST00000278412 USP17L8P0C7I0 530 aa13.9□□□□□ -0.18
SSRP1-201ENST00000278412 CCT2P78371 535 aaKnown RBP13.9□□□□□ -0.18
SSRP1-201ENST00000278412 CUL4AQ13619 759 aa13.9□□□□□ -0.18
SSRP1-201ENST00000278412 ILDR2Q71H61 639 aa13.9□□□□□ -0.18
SSRP1-201ENST00000278412 MB21D2Q8IYB1 491 aaPredicted RBP13.9□□□□□ -0.18
SSRP1-201ENST00000278412 YDJCA8MPS7 323 aa13.89□□□□□ -0.19
SSRP1-201ENST00000278412 PSMA5P28066 241 aa13.89□□□□□ -0.19
SSRP1-201ENST00000278412 WDR66Q8TBY9 1149 aa13.89□□□□□ -0.19
SSRP1-201ENST00000278412 TNPO1Q92973 898 aaKnown RBP13.89□□□□□ -0.19
SSRP1-201ENST00000278412 TOMM22Q9NS69 142 aa13.89□□□□□ -0.19
SSRP1-201ENST00000278412 SAP30BPQ9UHR5 308 aaKnown RBP13.89□□□□□ -0.19
SSRP1-201ENST00000278412 USP17L12C9JPN9 530 aa13.89□□□□□ -0.19
SSRP1-201ENST00000278412 USP17L21D6R901 530 aa13.89□□□□□ -0.19
SSRP1-201ENST00000278412 JAK2O60674 1132 aa13.89□□□□□ -0.19
SSRP1-201ENST00000278412 DHX32Q7L7V1 743 aaKnown RBP13.89□□□□□ -0.19
SSRP1-201ENST00000278412 TTLL6Q8N841 843 aa13.89□□□□□ -0.19
SSRP1-201ENST00000278412 CNKSR1Q969H4 720 aa13.89□□□□□ -0.19
SSRP1-201ENST00000278412 CHMP4CQ96CF2 233 aa13.89□□□□□ -0.19
SSRP1-201ENST00000278412 MYL10Q9BUA6 226 aa13.89□□□□□ -0.19
SSRP1-201ENST00000278412 CHMP5Q9NZZ3 219 aa13.89□□□□□ -0.19
SSRP1-201ENST00000278412 TAOK2Q9UL54 1235 aa13.89□□□□□ -0.19
SSRP1-201ENST00000278412 BRPF3Q9ULD4 1205 aa13.89□□□□□ -0.19
SSRP1-201ENST00000278412 FOSBP53539 338 aa13.88□□□□□ -0.19
SSRP1-201ENST00000278412 CCDC125Q86Z20 511 aa13.88□□□□□ -0.19
SSRP1-201ENST00000278412 KIAA0825Q8IV33 1275 aa13.88□□□□□ -0.19
SSRP1-201ENST00000278412 RTFDC1Q9BY42 306 aaPredicted RBP13.88□□□□□ -0.19
SSRP1-201ENST00000278412 PRC1O43663 620 aa13.88□□□□□ -0.19
SSRP1-201ENST00000278412 ECE2O60344 883 aa13.88□□□□□ -0.19
SSRP1-201ENST00000278412 KDM4AO75164 1064 aa13.88□□□□□ -0.19
SSRP1-201ENST00000278412 PTGER2P43116 358 aa13.88□□□□□ -0.19
SSRP1-201ENST00000278412 CACNB3P54284 484 aa13.88□□□□□ -0.19
SSRP1-201ENST00000278412 CTR9Q6PD62 1173 aa13.88□□□□□ -0.19
SSRP1-201ENST00000278412 MAPKAPK5Q8IW41 473 aa13.88□□□□□ -0.19
SSRP1-201ENST00000278412 SGIP1Q9BQI5 828 aa13.88□□□□□ -0.19
SSRP1-201ENST00000278412 MTFR1LQ9H019 292 aa13.88□□□□□ -0.19
SSRP1-201ENST00000278412 DCP1AQ9NPI6 582 aaPredicted RBP13.88□□□□□ -0.19
SSRP1-201ENST00000278412 BTDP43251 543 aa13.87□□□□□ -0.19
SSRP1-201ENST00000278412 FGD1P98174 961 aa13.87□□□□□ -0.19
SSRP1-201ENST00000278412 SLC44A5Q8NCS7 719 aa13.87□□□□□ -0.19
SSRP1-201ENST00000278412 TGFBRAP1Q8WUH2 860 aa13.87□□□□□ -0.19
SSRP1-201ENST00000278412 DYNLL2Q96FJ2 89 aa13.87□□□□□ -0.19
SSRP1-201ENST00000278412 CTNNA3Q9UI47 895 aa13.87□□□□□ -0.19
SSRP1-201ENST00000278412 PDS5AQ29RF7 1337 aaKnown RBP13.87□□□□□ -0.19
SSRP1-201ENST00000278412 G3V3G9 751 aa13.87□□□□□ -0.19
SSRP1-201ENST00000278412 PPARAQ07869 468 aa13.87□□□□□ -0.19
SSRP1-201ENST00000278412 KRT32Q14532 448 aa13.87□□□□□ -0.19
SSRP1-201ENST00000278412 DCAF8Q5TAQ9 597 aa13.87□□□□□ -0.19
SSRP1-201ENST00000278412 CCDC144CPQ8IYA2 1237 aa13.87□□□□□ -0.19
SSRP1-201ENST00000278412 SLC16A10Q8TF71 515 aa13.87□□□□□ -0.19
SSRP1-201ENST00000278412 COA1Q9GZY4 146 aa13.87□□□□□ -0.19
SSRP1-201ENST00000278412 ZSWIM5Q9P217 1185 aa13.87□□□□□ -0.19
SSRP1-201ENST00000278412 KIAA1551Q9HCM1 1747 aa13.87□□□□□ -0.19
SSRP1-201ENST00000278412 SALL1Q9NSC2 1324 aa13.87□□□□□ -0.19
SSRP1-201ENST00000278412 NMT2O60551 498 aa13.86□□□□□ -0.19
SSRP1-201ENST00000278412 SCRN1Q12765 414 aa13.86□□□□□ -0.19
SSRP1-201ENST00000278412 TMC4Q7Z404 712 aa13.86□□□□□ -0.19
SSRP1-201ENST00000278412 DDX11Q96FC9 970 aa13.86□□□□□ -0.19
SSRP1-201ENST00000278412 UBE2Q2LH0YL09 131 aa13.86□□□□□ -0.19
SSRP1-201ENST00000278412 PPIP5K2O43314 1243 aa13.86□□□□□ -0.19
SSRP1-201ENST00000278412 RTN4Q9NQC3 1192 aaKnown RBP13.86□□□□□ -0.19
SSRP1-201ENST00000278412 TTF2Q9UNY4 1162 aaKnown RBP13.86□□□□□ -0.19
SSRP1-201ENST00000278412 RAD17O75943 681 aa13.86□□□□□ -0.19
SSRP1-201ENST00000278412 TICAM2Q86XR7 235 aa13.86□□□□□ -0.19
SSRP1-201ENST00000278412 DAGLAQ9Y4D2 1042 aa13.86□□□□□ -0.19
SSRP1-201ENST00000278412 MROH7-TTC4A0A0A0MT08 1334 aa13.85□□□□□ -0.19
SSRP1-201ENST00000278412 PLCD1P51178 756 aa13.85□□□□□ -0.19
SSRP1-201ENST00000278412 RAB3GAP1Q15042 981 aa13.85□□□□□ -0.19
SSRP1-201ENST00000278412 NCOA7Q8NI08 942 aa13.85□□□□□ -0.19
SSRP1-201ENST00000278412 TMX4Q9H1E5 349 aaPredicted RBP13.85□□□□□ -0.19
SSRP1-201ENST00000278412 MCM9Q9NXL9 1143 aa13.85□□□□□ -0.19
SSRP1-201ENST00000278412 SCAF8Q9UPN6 1271 aaKnown RBP13.85□□□□□ -0.19
SSRP1-201ENST00000278412 ZBTB12Q9Y330 459 aaPredicted RBP13.85□□□□□ -0.19
SSRP1-201ENST00000278412 CDK5RAP2Q96SN8 1893 aa13.85□□□□□ -0.19
SSRP1-201ENST00000278412 DLEC1Q9Y238 1755 aa13.85□□□□□ -0.19
SSRP1-201ENST00000278412 CTDNEP1O95476 244 aa13.85□□□□□ -0.19
SSRP1-201ENST00000278412 GJB2P29033 226 aa13.85□□□□□ -0.19
SSRP1-201ENST00000278412 MCM2P49736 904 aa13.85□□□□□ -0.19
SSRP1-201ENST00000278412 RHBDL3P58872 404 aa13.85□□□□□ -0.19
SSRP1-201ENST00000278412 ALX1Q15699 326 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms