RNA–Protein interactions for RNA: ENST00000276241.10

CT55-201, Transcript of cancer/testis antigen 55, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CT55, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-201ENST00000276241 SPTY2D1Q68D10 685 aaPredicted RBP16.7■□□□□ 0.26
CT55-201ENST00000276241 RHPN1Q8TCX5 695 aa16.7■□□□□ 0.26
CT55-201ENST00000276241 BEGAINQ9BUH8 593 aa16.7■□□□□ 0.26
CT55-201ENST00000276241 PPP1R12BO60237 982 aaPredicted RBP16.69■□□□□ 0.26
CT55-201ENST00000276241 MECOMQ03112 1051 aa16.69■□□□□ 0.26
CT55-201ENST00000276241 MKRN3Q13064 507 aaKnown RBP16.69■□□□□ 0.26
CT55-201ENST00000276241 RAI14Q9P0K7 980 aa16.69■□□□□ 0.26
CT55-201ENST00000276241 CDC42EP5Q6NZY7 148 aa16.68■□□□□ 0.26
CT55-201ENST00000276241 KIF1BPQ96EK5 621 aa16.68■□□□□ 0.26
CT55-201ENST00000276241 TEPSINQ96N21 525 aa16.68■□□□□ 0.26
CT55-201ENST00000276241 MROH7-TTC4A0A0A0MT08 1334 aa16.68■□□□□ 0.26
CT55-201ENST00000276241 OTOFQ9HC10 1997 aa16.67■□□□□ 0.26
CT55-201ENST00000276241 BTDP43251 543 aa16.67■□□□□ 0.26
CT55-201ENST00000276241 KIF23Q02241 960 aaPredicted RBP16.67■□□□□ 0.26
CT55-201ENST00000276241 TCP10Q12799 353 aa16.67■□□□□ 0.26
CT55-201ENST00000276241 SLF2Q8IX21 1173 aa16.67■□□□□ 0.26
CT55-201ENST00000276241 USP40Q9NVE5 1235 aa16.67■□□□□ 0.26
CT55-201ENST00000276241 LRP2BPQ9P2M1 347 aa16.67■□□□□ 0.26
CT55-201ENST00000276241 TSKSQ9UJT2 592 aa16.67■□□□□ 0.26
CT55-201ENST00000276241 GAKO14976 1311 aa16.67■□□□□ 0.26
CT55-201ENST00000276241 MYH2Q9UKX2 1941 aa16.66■□□□□ 0.26
CT55-201ENST00000276241 ZAP70P43403 619 aa16.66■□□□□ 0.26
CT55-201ENST00000276241 IREB2P48200 963 aaKnown RBP16.66■□□□□ 0.26
CT55-201ENST00000276241 CTCFP49711 727 aaPredicted RBP16.66■□□□□ 0.26
CT55-201ENST00000276241 NFIAQ12857 509 aa16.66■□□□□ 0.26
CT55-201ENST00000276241 CLASRPQ8N2M8 674 aaKnown RBP16.66■□□□□ 0.26
CT55-201ENST00000276241 RPAP1Q9BWH6 1393 aaPredicted RBP16.65■□□□□ 0.26
CT55-201ENST00000276241 GSTO1P78417 241 aa16.65■□□□□ 0.26
CT55-201ENST00000276241 FAM83AQ86UY5 434 aa16.65■□□□□ 0.26
CT55-201ENST00000276241 ZNF384Q8TF68 577 aa16.65■□□□□ 0.26
CT55-201ENST00000276241 CLMNQ96JQ2 1002 aa16.65■□□□□ 0.26
CT55-201ENST00000276241 CRBNQ96SW2 442 aa16.65■□□□□ 0.26
CT55-201ENST00000276241 NDUFB9Q9Y6M9 179 aa16.65■□□□□ 0.26
CT55-201ENST00000276241 PCNTO95613 3336 aa16.64■□□□□ 0.25
CT55-201ENST00000276241 RAB11FIP3O75154 756 aa16.64■□□□□ 0.25
CT55-201ENST00000276241 CYP2E1P05181 493 aaPredicted RBP16.64■□□□□ 0.25
CT55-201ENST00000276241 IFIT2P09913 472 aaKnown RBP16.64■□□□□ 0.25
CT55-201ENST00000276241 HSPA8P11142 646 aaKnown RBP16.64■□□□□ 0.25
CT55-201ENST00000276241 LBX1P52954 281 aa16.64■□□□□ 0.25
CT55-201ENST00000276241 MAP3K11Q16584 847 aa16.64■□□□□ 0.25
CT55-201ENST00000276241 LDLRAD1Q5T700 205 aa16.64■□□□□ 0.25
CT55-201ENST00000276241 COL13A1Q5TAT6 717 aaPredicted RBP16.64■□□□□ 0.25
CT55-201ENST00000276241 FKBP1CQ5VVH2 108 aa16.64■□□□□ 0.25
CT55-201ENST00000276241 NSUN4Q96CB9 384 aaKnown RBP16.64■□□□□ 0.25
CT55-201ENST00000276241 ZNF512BQ96KM6 892 aaPredicted RBP16.64■□□□□ 0.25
CT55-201ENST00000276241 AKAP11Q9UKA4 1901 aa16.63■□□□□ 0.25
CT55-201ENST00000276241 USP2O75604 605 aaPredicted RBP16.63■□□□□ 0.25
CT55-201ENST00000276241 PICALMQ13492 652 aa16.63■□□□□ 0.25
CT55-201ENST00000276241 PIH1D3Q9NQM4 214 aaKnown RBP16.63■□□□□ 0.25
CT55-201ENST00000276241 FAM198AQ9UFP1 575 aa16.63■□□□□ 0.25
CT55-201ENST00000276241 RFX7Q2KHR2 1363 aa16.63■□□□□ 0.25
CT55-201ENST00000276241 NAA16Q6N069 864 aaPredicted RBP16.62■□□□□ 0.25
CT55-201ENST00000276241 ANKRD13AQ8IZ07 590 aa16.62■□□□□ 0.25
CT55-201ENST00000276241 FAM151AQ8WW52 585 aa16.62■□□□□ 0.25
CT55-201ENST00000276241 SLC10A4Q96EP9 437 aa16.62■□□□□ 0.25
CT55-201ENST00000276241 ELP3Q9H9T3 547 aa16.62■□□□□ 0.25
CT55-201ENST00000276241 SMARCA5O60264 1052 aaPredicted RBP16.62■□□□□ 0.25
CT55-201ENST00000276241 IDH1O75874 414 aaKnown RBP16.62■□□□□ 0.25
CT55-201ENST00000276241 LDHCP07864 332 aa16.62■□□□□ 0.25
CT55-201ENST00000276241 RGS3P49796 1198 aa16.62■□□□□ 0.25
CT55-201ENST00000276241 HOOK2Q96ED9 719 aa16.62■□□□□ 0.25
CT55-201ENST00000276241 FAM163AQ96GL9 167 aaPredicted RBP16.62■□□□□ 0.25
CT55-201ENST00000276241 CSRNP1Q96S65 589 aa16.62■□□□□ 0.25
CT55-201ENST00000276241 NOL10Q9BSC4 688 aaKnown RBP16.62■□□□□ 0.25
CT55-201ENST00000276241 LRRCC1Q9C099 1032 aa16.62■□□□□ 0.25
CT55-201ENST00000276241 DOCK2Q92608 1830 aa16.61■□□□□ 0.25
CT55-201ENST00000276241 GPR75-ASB3A0A0A6YYF3 556 aa16.61■□□□□ 0.25
CT55-201ENST00000276241 SPRYD7Q5W111 196 aa16.61■□□□□ 0.25
CT55-201ENST00000276241 MIGA2Q7L4E1 593 aa16.61■□□□□ 0.25
CT55-201ENST00000276241 ZSCAN29Q8IWY8 852 aaPredicted RBP16.61■□□□□ 0.25
CT55-201ENST00000276241 ZFPM1Q8IX07 1006 aa16.61■□□□□ 0.25
CT55-201ENST00000276241 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.61■□□□□ 0.25
CT55-201ENST00000276241 WNK4Q96J92 1243 aa16.61■□□□□ 0.25
CT55-201ENST00000276241 WRNIP1Q96S55 665 aa16.61■□□□□ 0.25
CT55-201ENST00000276241 DNAJC2Q99543 621 aaKnown RBP16.61■□□□□ 0.25
CT55-201ENST00000276241 ANTXR1Q9H6X2 564 aa16.61■□□□□ 0.25
CT55-201ENST00000276241 DDX4Q9NQI0 724 aaKnown RBP16.61■□□□□ 0.25
CT55-201ENST00000276241 CA12O43570 354 aa16.6■□□□□ 0.25
CT55-201ENST00000276241 WDHD1O75717 1129 aaPredicted RBP16.6■□□□□ 0.25
CT55-201ENST00000276241 RHBDL3P58872 404 aa16.6■□□□□ 0.25
CT55-201ENST00000276241 VGLL4Q14135 290 aa16.6■□□□□ 0.25
CT55-201ENST00000276241 DCAF15Q66K64 600 aa16.6■□□□□ 0.25
CT55-201ENST00000276241 IDI2Q9BXS1 227 aa16.6■□□□□ 0.25
CT55-201ENST00000276241 AATFQ9NY61 560 aaKnown RBP eCLIP16.6■□□□□ 0.25
CT55-201ENST00000276241 PCDHB15Q9Y5E8 787 aa16.6■□□□□ 0.25
CT55-201ENST00000276241 CSADQ9Y600 493 aa16.6■□□□□ 0.25
CT55-201ENST00000276241 TRPA1O75762 1119 aa16.59■□□□□ 0.25
CT55-201ENST00000276241 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.59■□□□□ 0.25
CT55-201ENST00000276241 ADGRA1Q86SQ6 560 aa16.59■□□□□ 0.25
CT55-201ENST00000276241 PRDM10Q9NQV6 1147 aa16.59■□□□□ 0.25
CT55-201ENST00000276241 MYO5AQ9Y4I1 1855 aaKnown RBP16.59■□□□□ 0.25
CT55-201ENST00000276241 UNCXA6NJT0 531 aa16.58■□□□□ 0.24
CT55-201ENST00000276241 ENTPD3O75355 529 aa16.58■□□□□ 0.24
CT55-201ENST00000276241 ZBTB48P10074 688 aaPredicted RBP16.58■□□□□ 0.24
CT55-201ENST00000276241 MAP3K9P80192 1104 aa16.58■□□□□ 0.24
CT55-201ENST00000276241 SREBF2Q12772 1141 aa16.58■□□□□ 0.24
CT55-201ENST00000276241 TEX11Q8IYF3 940 aa16.58■□□□□ 0.24
CT55-201ENST00000276241 REM2Q8IYK8 340 aaPredicted RBP16.58■□□□□ 0.24
CT55-201ENST00000276241 SH3RF3Q8TEJ3 882 aaPredicted RBP16.58■□□□□ 0.24
CT55-201ENST00000276241 CNKSR2Q8WXI2 1034 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms