RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 CNNM1Q9NRU3 951 aa11.34□□□□□ -0.59
TPM3-201ENST00000271850 ZNF70Q9UC06 446 aaPredicted RBP11.34□□□□□ -0.59
TPM3-201ENST00000271850 PPP2R3BQ9Y5P8 575 aa11.34□□□□□ -0.59
TPM3-201ENST00000271850 SREBF2Q12772 1141 aa11.33□□□□□ -0.6
TPM3-201ENST00000271850 TDRD3Q9H7E2 651 aaKnown RBP11.33□□□□□ -0.6
TPM3-201ENST00000271850 C9orf78Q9NZ63 289 aaPredicted RBP11.33□□□□□ -0.6
TPM3-201ENST00000271850 IQSEC3Q9UPP2 1182 aaPredicted RBP11.33□□□□□ -0.6
TPM3-201ENST00000271850 FKTNO75072 461 aa11.32□□□□□ -0.6
TPM3-201ENST00000271850 ZBTB48P10074 688 aaPredicted RBP11.32□□□□□ -0.6
TPM3-201ENST00000271850 HIBADHP31937 336 aaKnown RBP11.32□□□□□ -0.6
TPM3-201ENST00000271850 RFX5P48382 616 aaPredicted RBP11.32□□□□□ -0.6
TPM3-201ENST00000271850 TAF7LQ5H9L4 462 aa11.32□□□□□ -0.6
TPM3-201ENST00000271850 FBXO46Q6PJ61 603 aaPredicted RBP11.32□□□□□ -0.6
TPM3-201ENST00000271850 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.32□□□□□ -0.6
TPM3-201ENST00000271850 DZIP1LQ8IYY4 767 aaKnown RBP11.32□□□□□ -0.6
TPM3-201ENST00000271850 SSH1Q8WYL5 1049 aa11.32□□□□□ -0.6
TPM3-201ENST00000271850 SLC10A4Q96EP9 437 aa11.32□□□□□ -0.6
TPM3-201ENST00000271850 MS4A4AQ96JQ5 239 aa11.32□□□□□ -0.6
TPM3-201ENST00000271850 TMEM39BQ9GZU3 492 aa11.32□□□□□ -0.6
TPM3-201ENST00000271850 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.32□□□□□ -0.6
TPM3-201ENST00000271850 SERPINA10Q9UK55 444 aa11.32□□□□□ -0.6
TPM3-201ENST00000271850 TTF2Q9UNY4 1162 aaKnown RBP11.32□□□□□ -0.6
TPM3-201ENST00000271850 TESPA1A2RU30 521 aaPredicted RBP11.31□□□□□ -0.6
TPM3-201ENST00000271850 MANSC4A6NHS7 340 aaPredicted RBP11.31□□□□□ -0.6
TPM3-201ENST00000271850 FGFR2P21802 821 aa11.31□□□□□ -0.6
TPM3-201ENST00000271850 CRKP46108 304 aa11.31□□□□□ -0.6
TPM3-201ENST00000271850 CRHR2Q13324 411 aa11.31□□□□□ -0.6
TPM3-201ENST00000271850 PKN2Q16513 984 aaKnown RBP11.31□□□□□ -0.6
TPM3-201ENST00000271850 USP44Q9H0E7 712 aa11.31□□□□□ -0.6
TPM3-201ENST00000271850 TCP10L2B9ZVM9 353 aa11.3□□□□□ -0.6
TPM3-201ENST00000271850 BCAMP50895 628 aa11.3□□□□□ -0.6
TPM3-201ENST00000271850 RBM5P52756 815 aaKnown RBP eCLIP11.3□□□□□ -0.6
TPM3-201ENST00000271850 CACNB3P54284 484 aa11.3□□□□□ -0.6
TPM3-201ENST00000271850 OTOP1Q7RTM1 612 aa11.3□□□□□ -0.6
TPM3-201ENST00000271850 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.3□□□□□ -0.6
TPM3-201ENST00000271850 ELP3Q9H9T3 547 aa11.3□□□□□ -0.6
TPM3-201ENST00000271850 MROH5Q6ZUA9 1318 aa11.3□□□□□ -0.6
TPM3-201ENST00000271850 ZSWIM8A7E2V4 1837 aa11.3□□□□□ -0.6
TPM3-201ENST00000271850 UNCXA6NJT0 531 aa11.29□□□□□ -0.6
TPM3-201ENST00000271850 MYO1BO43795 1136 aa11.29□□□□□ -0.6
TPM3-201ENST00000271850 PPP1R12BO60237 982 aaPredicted RBP11.29□□□□□ -0.6
TPM3-201ENST00000271850 PDE8BO95263 885 aa11.29□□□□□ -0.6
TPM3-201ENST00000271850 VGLL4Q14135 290 aa11.29□□□□□ -0.6
TPM3-201ENST00000271850 SUPT20HL1Q3ZLR7 823 aa11.29□□□□□ -0.6
TPM3-201ENST00000271850 APOBEC3HQ6NTF7 200 aaKnown RBP11.29□□□□□ -0.6
TPM3-201ENST00000271850 GPR153Q6NV75 609 aa11.29□□□□□ -0.6
TPM3-201ENST00000271850 ANKRD13AQ8IZ07 590 aa11.29□□□□□ -0.6
TPM3-201ENST00000271850 BRI3BPQ8WY22 251 aa11.29□□□□□ -0.6
TPM3-201ENST00000271850 OPTNQ96CV9 577 aa11.29□□□□□ -0.6
TPM3-201ENST00000271850 CDCA7LQ96GN5 454 aa11.29□□□□□ -0.6
TPM3-201ENST00000271850 ALDH1A1P00352 501 aa11.28□□□□□ -0.6
TPM3-201ENST00000271850 IREB2P48200 963 aaKnown RBP11.28□□□□□ -0.6
TPM3-201ENST00000271850 SLFN5Q08AF3 891 aa11.28□□□□□ -0.6
TPM3-201ENST00000271850 CHAF1AQ13111 956 aaPredicted RBP11.28□□□□□ -0.6
TPM3-201ENST00000271850 METTL24Q5JXM2 366 aa11.28□□□□□ -0.6
TPM3-201ENST00000271850 TMEM92Q6UXU6 159 aa11.28□□□□□ -0.6
TPM3-201ENST00000271850 ATG9AQ7Z3C6 839 aa11.28□□□□□ -0.6
TPM3-201ENST00000271850 CD99L2Q8TCZ2 262 aa11.28□□□□□ -0.6
TPM3-201ENST00000271850 TRIM17Q9Y577 477 aa11.28□□□□□ -0.6
TPM3-201ENST00000271850 SNCAIPQ9Y6H5 919 aa11.28□□□□□ -0.6
TPM3-201ENST00000271850 PTPRCP08575 1304 aa11.28□□□□□ -0.6
TPM3-201ENST00000271850 INHBEP58166 350 aa11.27□□□□□ -0.61
TPM3-201ENST00000271850 TRMT2AQ8IZ69 625 aaKnown RBP11.27□□□□□ -0.61
TPM3-201ENST00000271850 FAM43AQ8N2R8 423 aa11.27□□□□□ -0.61
TPM3-201ENST00000271850 KIAA0100Q14667 2235 aaKnown RBP11.27□□□□□ -0.61
TPM3-201ENST00000271850 RBBP6Q7Z6E9 1792 aaKnown RBP11.26□□□□□ -0.61
TPM3-201ENST00000271850 HDLBPQ00341 1268 aaKnown RBP11.26□□□□□ -0.61
TPM3-201ENST00000271850 TNFAIP1Q13829 316 aa11.26□□□□□ -0.61
TPM3-201ENST00000271850 ZDHHC15Q96MV8 337 aa11.26□□□□□ -0.61
TPM3-201ENST00000271850 PTPN22Q9Y2R2 807 aa11.26□□□□□ -0.61
TPM3-201ENST00000271850 KIF16BQ96L93 1317 aa11.26□□□□□ -0.61
TPM3-201ENST00000271850 E9PSI1 815 aa11.25□□□□□ -0.61
TPM3-201ENST00000271850 EYA2O00167 538 aa11.25□□□□□ -0.61
TPM3-201ENST00000271850 MAP3K9P80192 1104 aa11.25□□□□□ -0.61
TPM3-201ENST00000271850 PRPF38BQ5VTL8 546 aaKnown RBP11.25□□□□□ -0.61
TPM3-201ENST00000271850 RPAP1Q9BWH6 1393 aaPredicted RBP11.25□□□□□ -0.61
TPM3-201ENST00000271850 CCL15-CCL14A0A0B4J2E2 113 aa11.24□□□□□ -0.61
TPM3-201ENST00000271850 SPDYE5A6NIY4 337 aa11.24□□□□□ -0.61
TPM3-201ENST00000271850 NFIAQ12857 509 aa11.24□□□□□ -0.61
TPM3-201ENST00000271850 PUM3Q15397 648 aaKnown RBP11.24□□□□□ -0.61
TPM3-201ENST00000271850 DIXDC1Q155Q3 683 aa11.24□□□□□ -0.61
TPM3-201ENST00000271850 CCL15Q16663 113 aa11.24□□□□□ -0.61
TPM3-201ENST00000271850 TBC1D22AQ8WUA7 517 aa11.24□□□□□ -0.61
TPM3-201ENST00000271850 ZKSCAN4Q969J2 545 aaPredicted RBP11.24□□□□□ -0.61
TPM3-201ENST00000271850 TEKT1Q969V4 418 aa11.24□□□□□ -0.61
TPM3-201ENST00000271850 ARMC5Q96C12 935 aa11.24□□□□□ -0.61
TPM3-201ENST00000271850 MRIQ9BWK5 157 aa11.24□□□□□ -0.61
TPM3-201ENST00000271850 ARHGAP39Q9C0H5 1083 aa11.24□□□□□ -0.61
TPM3-201ENST00000271850 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.24□□□□□ -0.61
TPM3-201ENST00000271850 ATRNL1Q5VV63 1379 aa11.24□□□□□ -0.61
TPM3-201ENST00000271850 MYH13Q9UKX3 1938 aa11.23□□□□□ -0.61
TPM3-201ENST00000271850 IRF6O14896 467 aa11.23□□□□□ -0.61
TPM3-201ENST00000271850 SLURP2P0DP57 97 aa11.23□□□□□ -0.61
TPM3-201ENST00000271850 CTGFP29279 349 aa11.23□□□□□ -0.61
TPM3-201ENST00000271850 PRDX5P30044 214 aa11.23□□□□□ -0.61
TPM3-201ENST00000271850 INPP5BP32019 993 aa11.23□□□□□ -0.61
TPM3-201ENST00000271850 ZEB1P37275 1124 aaPredicted RBP11.23□□□□□ -0.61
TPM3-201ENST00000271850 SP3Q02447 781 aa11.23□□□□□ -0.61
TPM3-201ENST00000271850 MOGSQ13724 837 aa11.23□□□□□ -0.61
TPM3-201ENST00000271850 CAVIN4Q5BKX8 364 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms