RNA–Protein interactions for RNA: ENST00000271620.7

PRUNE1-201, Transcript of prune exopolyphosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRUNE1, Length 2,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-201ENST00000271620 SHANK3Q9BYB0 1731 aa12.58□□□□□ -0.4
PRUNE1-201ENST00000271620 TCRBV5S4A2TA0A5A2 114 aa12.58□□□□□ -0.4
PRUNE1-201ENST00000271620 IFIT3O14879 490 aaKnown RBP12.58□□□□□ -0.4
PRUNE1-201ENST00000271620 ZBTB43O43298 467 aa12.58□□□□□ -0.4
PRUNE1-201ENST00000271620 RANBP6O60518 1105 aaKnown RBP12.58□□□□□ -0.4
PRUNE1-201ENST00000271620 GUCY1A2P33402 732 aa12.58□□□□□ -0.4
PRUNE1-201ENST00000271620 ATP6V1AP38606 617 aa12.58□□□□□ -0.4
PRUNE1-201ENST00000271620 TTF1Q15361 905 aaPredicted RBP12.58□□□□□ -0.4
PRUNE1-201ENST00000271620 GLIPR1L2Q4G1C9 344 aa12.58□□□□□ -0.4
PRUNE1-201ENST00000271620 LRRC8AQ8IWT6 810 aa12.58□□□□□ -0.4
PRUNE1-201ENST00000271620 IFNL3Q8IZI9 196 aa12.58□□□□□ -0.4
PRUNE1-201ENST00000271620 KCNG4Q8TDN1 519 aa12.58□□□□□ -0.4
PRUNE1-201ENST00000271620 LPIN2Q92539 896 aa12.58□□□□□ -0.4
PRUNE1-201ENST00000271620 BCL2L12Q9HB09 334 aa12.58□□□□□ -0.4
PRUNE1-201ENST00000271620 ABCF2Q9UG63 623 aa12.58□□□□□ -0.4
PRUNE1-201ENST00000271620 TNNT1P13805 278 aa12.57□□□□□ -0.4
PRUNE1-201ENST00000271620 UBE3CQ15386 1083 aa12.57□□□□□ -0.4
PRUNE1-201ENST00000271620 FBXL16Q8N461 479 aa12.57□□□□□ -0.4
PRUNE1-201ENST00000271620 IGDCC4Q8TDY8 1250 aa12.57□□□□□ -0.4
PRUNE1-201ENST00000271620 POLR3EQ9NVU0 708 aa12.57□□□□□ -0.4
PRUNE1-201ENST00000271620 BCL9O00512 1426 aa12.57□□□□□ -0.4
PRUNE1-201ENST00000271620 GOLGA8AA7E2F4 631 aa12.57□□□□□ -0.4
PRUNE1-201ENST00000271620 SMC2O95347 1197 aa12.57□□□□□ -0.4
PRUNE1-201ENST00000271620 SLC3A2P08195 630 aaKnown RBP12.57□□□□□ -0.4
PRUNE1-201ENST00000271620 SKILP12757 684 aa12.57□□□□□ -0.4
PRUNE1-201ENST00000271620 AXDND1Q5T1B0 1012 aaPredicted RBP12.57□□□□□ -0.4
PRUNE1-201ENST00000271620 LCORLQ8N3X6 602 aa12.57□□□□□ -0.4
PRUNE1-201ENST00000271620 KCNJ14Q9UNX9 436 aa12.57□□□□□ -0.4
PRUNE1-201ENST00000271620 EP400Q96L91 3159 aa12.57□□□□□ -0.4
PRUNE1-201ENST00000271620 ZMYM6O95789 1325 aa12.57□□□□□ -0.4
PRUNE1-201ENST00000271620 LMOD1P29536 600 aaPredicted RBP12.57□□□□□ -0.4
PRUNE1-201ENST00000271620 IARSP41252 1262 aaKnown RBP12.57□□□□□ -0.4
PRUNE1-201ENST00000271620 TDO2P48775 406 aa12.57□□□□□ -0.4
PRUNE1-201ENST00000271620 ATL3Q6DD88 541 aa12.57□□□□□ -0.4
PRUNE1-201ENST00000271620 SDR42E1Q8WUS8 393 aa12.57□□□□□ -0.4
PRUNE1-201ENST00000271620 LY9Q9HBG7 655 aa12.57□□□□□ -0.4
PRUNE1-201ENST00000271620 hCG_1642624A0A1W2PR95 340 aa12.56□□□□□ -0.4
PRUNE1-201ENST00000271620 CCDC69A6NI79 296 aa12.56□□□□□ -0.4
PRUNE1-201ENST00000271620 NUP133Q8WUM0 1156 aa12.56□□□□□ -0.4
PRUNE1-201ENST00000271620 FAM217BQ9NTX9 383 aaPredicted RBP12.56□□□□□ -0.4
PRUNE1-201ENST00000271620 LRP2BPQ9P2M1 347 aa12.56□□□□□ -0.4
PRUNE1-201ENST00000271620 NIP7Q9Y221 180 aaKnown RBP eCLIP12.56□□□□□ -0.4
PRUNE1-201ENST00000271620 SLC12A7Q9Y666 1083 aa12.56□□□□□ -0.4
PRUNE1-201ENST00000271620 AKAP11Q9UKA4 1901 aa12.56□□□□□ -0.4
PRUNE1-201ENST00000271620 MINDY4BA8MYZ0 360 aa12.56□□□□□ -0.4
PRUNE1-201ENST00000271620 ARID4AP29374 1257 aaPredicted RBP12.56□□□□□ -0.4
PRUNE1-201ENST00000271620 CRKLP46109 303 aaKnown RBP12.56□□□□□ -0.4
PRUNE1-201ENST00000271620 MAP3K12Q12852 859 aa12.56□□□□□ -0.4
PRUNE1-201ENST00000271620 BICDL1Q6ZP65 573 aa12.56□□□□□ -0.4
PRUNE1-201ENST00000271620 ZNF34Q8IZ26 560 aa12.56□□□□□ -0.4
PRUNE1-201ENST00000271620 IFNKQ9P0W0 207 aa12.56□□□□□ -0.4
PRUNE1-201ENST00000271620 SLC4A4Q9Y6R1 1079 aa12.56□□□□□ -0.4
PRUNE1-201ENST00000271620 GSG1L2A8MUP6 293 aa12.55□□□□□ -0.4
PRUNE1-201ENST00000271620 BTBD18B2RXH4 712 aa12.55□□□□□ -0.4
PRUNE1-201ENST00000271620 YEATS4O95619 227 aa12.55□□□□□ -0.4
PRUNE1-201ENST00000271620 ATP1A3P13637 1013 aa12.55□□□□□ -0.4
PRUNE1-201ENST00000271620 SLC5A1P13866 664 aa12.55□□□□□ -0.4
PRUNE1-201ENST00000271620 IL6STP40189 918 aaPredicted RBP12.55□□□□□ -0.4
PRUNE1-201ENST00000271620 PNOCQ13519 176 aa12.55□□□□□ -0.4
PRUNE1-201ENST00000271620 BRAPQ7Z569 592 aa12.55□□□□□ -0.4
PRUNE1-201ENST00000271620 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.55□□□□□ -0.4
PRUNE1-201ENST00000271620 PAPPAQ13219 1627 aa12.55□□□□□ -0.4
PRUNE1-201ENST00000271620 A0A1W2PQ27 194 aa12.55□□□□□ -0.4
PRUNE1-201ENST00000271620 A0A1W2PQ64 194 aa12.55□□□□□ -0.4
PRUNE1-201ENST00000271620 A0A1W2PQD8 194 aa12.55□□□□□ -0.4
PRUNE1-201ENST00000271620 PATL2C9JE40 543 aaKnown RBP12.55□□□□□ -0.4
PRUNE1-201ENST00000271620 CAVIN2O95810 425 aa12.55□□□□□ -0.4
PRUNE1-201ENST00000271620 FGFR2P21802 821 aa12.55□□□□□ -0.4
PRUNE1-201ENST00000271620 NTRK3Q16288 839 aa12.55□□□□□ -0.4
PRUNE1-201ENST00000271620 SHC4Q6S5L8 630 aa12.55□□□□□ -0.4
PRUNE1-201ENST00000271620 ADGRA1Q86SQ6 560 aa12.55□□□□□ -0.4
PRUNE1-201ENST00000271620 KLHL34Q8N239 644 aa12.55□□□□□ -0.4
PRUNE1-201ENST00000271620 XPO4Q9C0E2 1151 aaKnown RBP12.55□□□□□ -0.4
PRUNE1-201ENST00000271620 FOXN1O15353 648 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 SYKP43405 635 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 GYG1P46976 350 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 GRIN1Q05586 938 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 INTS5Q6P9B9 1019 aaKnown RBP12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 MFSD6Q6ZSS7 791 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 NBPF11Q86T75 865 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 TICAM2Q86XR7 235 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 CCDC24Q8N4L8 307 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 CHMP4CQ96CF2 233 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 MRFAP1L1Q96HT8 127 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 NAT10Q9H0A0 1025 aaKnown RBP12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 KCNQ2O43526 872 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 UQCRFS1P1P0C7P4 283 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 SLC39A14Q15043 492 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 CPLX2Q6PUV4 134 aaKnown RBP12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 UTP14AQ9BVJ6 771 aaKnown RBP12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 PRDM10Q9NQV6 1147 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 MROH5Q6ZUA9 1318 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 CYP2D7A0A087X1C5 515 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 PRDM1O75626 825 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 EIF5P55010 431 aaKnown RBP12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 NR5A1Q13285 461 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 ITPK1Q13572 414 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 TRIM29Q14134 588 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 SLC4A8Q2Y0W8 1093 aa12.54□□□□□ -0.4
PRUNE1-201ENST00000271620 SARM1Q6SZW1 724 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms