RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 OTUD7BQ6GQQ9 843 aa17.52■□□□□ 0.39
TIMP3-201ENST00000266085 SPAG5Q96R06 1193 aa17.52■□□□□ 0.39
TIMP3-201ENST00000266085 SEC62Q99442 399 aaKnown RBP17.52■□□□□ 0.39
TIMP3-201ENST00000266085 PUS3Q9BZE2 481 aaKnown RBP17.52■□□□□ 0.39
TIMP3-201ENST00000266085 FBXO3Q9UK99 471 aa17.52■□□□□ 0.39
TIMP3-201ENST00000266085 ALDH1B1P30837 517 aa17.51■□□□□ 0.39
TIMP3-201ENST00000266085 BCAMP50895 628 aa17.51■□□□□ 0.39
TIMP3-201ENST00000266085 MAP9Q49MG5 647 aa17.51■□□□□ 0.39
TIMP3-201ENST00000266085 DTHD1Q6ZMT9 781 aa17.51■□□□□ 0.39
TIMP3-201ENST00000266085 KRI1Q8N9T8 703 aaKnown RBP17.51■□□□□ 0.39
TIMP3-201ENST00000266085 ALS2CR12Q96Q35 445 aa17.51■□□□□ 0.39
TIMP3-201ENST00000266085 MPHOSPH6Q99547 160 aaKnown RBP17.51■□□□□ 0.39
TIMP3-201ENST00000266085 SKILP12757 684 aa17.51■□□□□ 0.39
TIMP3-201ENST00000266085 IQUBQ8NA54 791 aa17.51■□□□□ 0.39
TIMP3-201ENST00000266085 TBC1D22AQ8WUA7 517 aa17.51■□□□□ 0.39
TIMP3-201ENST00000266085 DEXIO95424 95 aa17.51■□□□□ 0.39
TIMP3-201ENST00000266085 GNG11P61952 73 aa17.51■□□□□ 0.39
TIMP3-201ENST00000266085 GTF2IP78347 998 aa17.51■□□□□ 0.39
TIMP3-201ENST00000266085 TAX1BP1Q86VP1 789 aa17.51■□□□□ 0.39
TIMP3-201ENST00000266085 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.51■□□□□ 0.39
TIMP3-201ENST00000266085 DSCC1Q9BVC3 393 aa17.51■□□□□ 0.39
TIMP3-201ENST00000266085 MFSD14BQ5SR56 506 aa17.5■□□□□ 0.39
TIMP3-201ENST00000266085 CCDC174Q6PII3 467 aa17.5■□□□□ 0.39
TIMP3-201ENST00000266085 AXIN2Q9Y2T1 843 aa17.5■□□□□ 0.39
TIMP3-201ENST00000266085 CERS3Q8IU89 383 aa17.5■□□□□ 0.39
TIMP3-201ENST00000266085 PIGBQ92521 554 aa17.5■□□□□ 0.39
TIMP3-201ENST00000266085 TM6SF1Q9BZW5 370 aa17.5■□□□□ 0.39
TIMP3-201ENST00000266085 E7EWF7 191 aa17.49■□□□□ 0.39
TIMP3-201ENST00000266085 PDE8BO95263 885 aa17.49■□□□□ 0.39
TIMP3-201ENST00000266085 PDE6AP16499 860 aa17.49■□□□□ 0.39
TIMP3-201ENST00000266085 MRPL12P52815 198 aaKnown RBP17.49■□□□□ 0.39
TIMP3-201ENST00000266085 TGFBRAP1Q8WUH2 860 aa17.49■□□□□ 0.39
TIMP3-201ENST00000266085 RNF17Q9BXT8 1623 aaKnown RBP17.49■□□□□ 0.39
TIMP3-201ENST00000266085 A0A1B0GVL5 298 aa17.49■□□□□ 0.39
TIMP3-201ENST00000266085 CYP27B1O15528 508 aa17.49■□□□□ 0.39
TIMP3-201ENST00000266085 TCP10Q12799 353 aa17.49■□□□□ 0.39
TIMP3-201ENST00000266085 ZNF174Q15697 407 aa17.49■□□□□ 0.39
TIMP3-201ENST00000266085 LETM2Q2VYF4 491 aa17.49■□□□□ 0.39
TIMP3-201ENST00000266085 USP17L12C9JPN9 530 aa17.49■□□□□ 0.39
TIMP3-201ENST00000266085 USP17L21D6R901 530 aa17.49■□□□□ 0.39
TIMP3-201ENST00000266085 MCM3P25205 808 aa17.49■□□□□ 0.39
TIMP3-201ENST00000266085 NOP2P46087 812 aaKnown RBP17.49■□□□□ 0.39
TIMP3-201ENST00000266085 PTH1RQ03431 593 aa17.49■□□□□ 0.39
TIMP3-201ENST00000266085 FAM196AQ6ZSG2 479 aa17.49■□□□□ 0.39
TIMP3-201ENST00000266085 DIS3L2Q8IYB7 885 aaKnown RBP17.49■□□□□ 0.39
TIMP3-201ENST00000266085 TAF3Q5VWG9 929 aa17.49■□□□□ 0.39
TIMP3-201ENST00000266085 HAUS7Q99871 368 aa17.49■□□□□ 0.39
TIMP3-201ENST00000266085 TMX1Q9H3N1 280 aa17.49■□□□□ 0.39
TIMP3-201ENST00000266085 DBNLQ9UJU6 430 aaKnown RBP17.49■□□□□ 0.39
TIMP3-201ENST00000266085 CHRNDQ07001 517 aa17.48■□□□□ 0.39
TIMP3-201ENST00000266085 GRM1Q13255 1194 aa17.48■□□□□ 0.39
TIMP3-201ENST00000266085 AKNAD1Q5T1N1 836 aa17.48■□□□□ 0.39
TIMP3-201ENST00000266085 FLAD1Q8NFF5 587 aa17.48■□□□□ 0.39
TIMP3-201ENST00000266085 PHKBQ93100 1093 aa17.48■□□□□ 0.39
TIMP3-201ENST00000266085 PLIN2Q99541 437 aa17.48■□□□□ 0.39
TIMP3-201ENST00000266085 VWA3AA6NCI4 1184 aa17.48■□□□□ 0.39
TIMP3-201ENST00000266085 TMCO5BA8MYB1 307 aa17.48■□□□□ 0.39
TIMP3-201ENST00000266085 FAM160A1Q05DH4 1040 aa17.48■□□□□ 0.39
TIMP3-201ENST00000266085 TRIM37O94972 964 aa17.48■□□□□ 0.39
TIMP3-201ENST00000266085 ZNF830Q96NB3 372 aaPredicted RBP17.48■□□□□ 0.39
TIMP3-201ENST00000266085 SH2D4AQ9H788 454 aa17.48■□□□□ 0.39
TIMP3-201ENST00000266085 TFAP4Q01664 338 aa17.48■□□□□ 0.39
TIMP3-201ENST00000266085 PHKA1P46020 1223 aa17.47■□□□□ 0.39
TIMP3-201ENST00000266085 BICD1Q96G01 975 aa17.47■□□□□ 0.39
TIMP3-201ENST00000266085 MACROD2A1Z1Q3 448 aa17.47■□□□□ 0.39
TIMP3-201ENST00000266085 PPIP5K2O43314 1243 aa17.47■□□□□ 0.39
TIMP3-201ENST00000266085 PDE6BP35913 854 aa17.47■□□□□ 0.39
TIMP3-201ENST00000266085 USP37Q86T82 979 aa17.47■□□□□ 0.39
TIMP3-201ENST00000266085 EHBP1Q8NDI1 1231 aa17.47■□□□□ 0.39
TIMP3-201ENST00000266085 MMRN2Q9H8L6 949 aa17.47■□□□□ 0.39
TIMP3-201ENST00000266085 HEG1Q9ULI3 1381 aa17.47■□□□□ 0.39
TIMP3-201ENST00000266085 JAK2O60674 1132 aa17.47■□□□□ 0.39
TIMP3-201ENST00000266085 CYLC1P35663 651 aaPredicted RBP17.47■□□□□ 0.39
TIMP3-201ENST00000266085 GTPBP4Q9BZE4 634 aaKnown RBP17.47■□□□□ 0.39
TIMP3-201ENST00000266085 TTF2Q9UNY4 1162 aaKnown RBP17.47■□□□□ 0.39
TIMP3-201ENST00000266085 STX17P56962 302 aa17.46■□□□□ 0.39
TIMP3-201ENST00000266085 NLGN1Q8N2Q7 840 aa17.46■□□□□ 0.39
TIMP3-201ENST00000266085 SUPT20HQ8NEM7 779 aa17.46■□□□□ 0.39
TIMP3-201ENST00000266085 CCDC172P0C7W6 258 aa17.46■□□□□ 0.39
TIMP3-201ENST00000266085 PPP2R5BQ15173 497 aa17.46■□□□□ 0.39
TIMP3-201ENST00000266085 ZYXQ15942 572 aaKnown RBP17.46■□□□□ 0.39
TIMP3-201ENST00000266085 NEBLO76041 1014 aa17.46■□□□□ 0.39
TIMP3-201ENST00000266085 CEP135Q66GS9 1140 aa17.46■□□□□ 0.39
TIMP3-201ENST00000266085 FCHSD1Q86WN1 690 aa17.46■□□□□ 0.39
TIMP3-201ENST00000266085 PALD1Q9ULE6 856 aa17.46■□□□□ 0.39
TIMP3-201ENST00000266085 ADGRL3Q9HAR2 1447 aa17.46■□□□□ 0.39
TIMP3-201ENST00000266085 ADORA1P30542 326 aa17.46■□□□□ 0.38
TIMP3-201ENST00000266085 ANO1Q5XXA6 986 aa17.46■□□□□ 0.38
TIMP3-201ENST00000266085 NAA15Q9BXJ9 866 aaKnown RBP17.46■□□□□ 0.38
TIMP3-201ENST00000266085 ELP1O95163 1332 aa17.46■□□□□ 0.38
TIMP3-201ENST00000266085 HSPD1P10809 573 aaKnown RBP17.45■□□□□ 0.38
TIMP3-201ENST00000266085 TTC12Q9H892 705 aaPredicted RBP17.45■□□□□ 0.38
TIMP3-201ENST00000266085 STAP2Q9UGK3 403 aa17.45■□□□□ 0.38
TIMP3-201ENST00000266085 PAXBP1Q9Y5B6 917 aa17.45■□□□□ 0.38
TIMP3-201ENST00000266085 KIAA0754O94854 1291 aa17.45■□□□□ 0.38
TIMP3-201ENST00000266085 SLC1A4P43007 532 aa17.45■□□□□ 0.38
TIMP3-201ENST00000266085 TLR7Q9NYK1 1049 aaKnown RBP17.45■□□□□ 0.38
TIMP3-201ENST00000266085 RRP9O43818 475 aaKnown RBP17.45■□□□□ 0.38
TIMP3-201ENST00000266085 FAM47AQ5JRC9 791 aa17.45■□□□□ 0.38
TIMP3-201ENST00000266085 PIK3AP1Q6ZUJ8 805 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms