RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ADKP55263 362 aaKnown RBP10.05□□□□□ -0.8
VAPB-201ENST00000265619 IGSF22Q8N9C0 903 aa10.05□□□□□ -0.8
VAPB-201ENST00000265619 NOA1Q8NC60 698 aaKnown RBP10.05□□□□□ -0.8
VAPB-201ENST00000265619 FAM227BQ96M60 508 aa10.05□□□□□ -0.8
VAPB-201ENST00000265619 MPHOSPH8Q99549 860 aa10.05□□□□□ -0.8
VAPB-201ENST00000265619 MCM8Q9UJA3 840 aa10.05□□□□□ -0.8
VAPB-201ENST00000265619 ELF1P32519 619 aa10.05□□□□□ -0.8
VAPB-201ENST00000265619 USP5P45974 858 aa10.05□□□□□ -0.8
VAPB-201ENST00000265619 ATP8B2P98198 1209 aa10.05□□□□□ -0.8
VAPB-201ENST00000265619 GUCY1B3Q02153 619 aa10.05□□□□□ -0.8
VAPB-201ENST00000265619 FLIIQ13045 1269 aa10.05□□□□□ -0.8
VAPB-201ENST00000265619 C11orf91Q3C1V1 193 aa10.05□□□□□ -0.8
VAPB-201ENST00000265619 JAKMIP3Q5VZ66 844 aa10.05□□□□□ -0.8
VAPB-201ENST00000265619 CREB3L3Q68CJ9 461 aa10.05□□□□□ -0.8
VAPB-201ENST00000265619 GBP6Q6ZN66 633 aa10.05□□□□□ -0.8
VAPB-201ENST00000265619 TTC5Q8N0Z6 440 aa10.05□□□□□ -0.8
VAPB-201ENST00000265619 FANCLQ9NW38 375 aa10.05□□□□□ -0.8
VAPB-201ENST00000265619 RAB21Q9UL25 225 aa10.05□□□□□ -0.8
VAPB-201ENST00000265619 RBM8AQ9Y5S9 174 aaKnown RBP10.05□□□□□ -0.8
VAPB-201ENST00000265619 ZC3H4Q9UPT8 1303 aaKnown RBP10.05□□□□□ -0.8
VAPB-201ENST00000265619 KINO60870 393 aaKnown RBP10.04□□□□□ -0.8
VAPB-201ENST00000265619 CCNHP51946 323 aaPredicted RBP10.04□□□□□ -0.8
VAPB-201ENST00000265619 NDUFA8P51970 172 aa10.04□□□□□ -0.8
VAPB-201ENST00000265619 ACTN3Q08043 901 aaPredicted RBP10.04□□□□□ -0.8
VAPB-201ENST00000265619 FAM71BQ8TC56 605 aa10.04□□□□□ -0.8
VAPB-201ENST00000265619 HNRNPLLQ8WVV9 542 aaKnown RBP10.04□□□□□ -0.8
VAPB-201ENST00000265619 HINFPQ9BQA5 517 aa10.04□□□□□ -0.8
VAPB-201ENST00000265619 CAPN7Q9Y6W3 813 aa10.04□□□□□ -0.8
VAPB-201ENST00000265619 C21orf2O43822 256 aa10.04□□□□□ -0.8
VAPB-201ENST00000265619 FNTAP49354 379 aa10.04□□□□□ -0.8
VAPB-201ENST00000265619 TBC1D8BQ0IIM8 1120 aa10.04□□□□□ -0.8
VAPB-201ENST00000265619 ILDR1Q86SU0 546 aaPredicted RBP10.04□□□□□ -0.8
VAPB-201ENST00000265619 LRRC2Q9BYS8 371 aa10.04□□□□□ -0.8
VAPB-201ENST00000265619 LZTFL1Q9NQ48 299 aa10.04□□□□□ -0.8
VAPB-201ENST00000265619 SPATA31A3Q5VYP0 1347 aa10.04□□□□□ -0.8
VAPB-201ENST00000265619 SETQ01105 290 aaPredicted RBP10.04□□□□□ -0.8
VAPB-201ENST00000265619 MTX1Q13505 466 aa10.04□□□□□ -0.8
VAPB-201ENST00000265619 SRGAP1Q7Z6B7 1085 aa10.04□□□□□ -0.8
VAPB-201ENST00000265619 GSPT2Q8IYD1 628 aaKnown RBP10.04□□□□□ -0.8
VAPB-201ENST00000265619 SOS1Q07889 1333 aaPredicted RBP10.03□□□□□ -0.8
VAPB-201ENST00000265619 CDHR2Q9BYE9 1310 aa10.03□□□□□ -0.8
VAPB-201ENST00000265619 NRKQ7Z2Y5 1582 aa10.03□□□□□ -0.8
VAPB-201ENST00000265619 RNMTO43148 476 aaKnown RBP10.03□□□□□ -0.8
VAPB-201ENST00000265619 CABP4P57796 275 aa10.03□□□□□ -0.8
VAPB-201ENST00000265619 FMR1NBQ8N0W7 255 aaPredicted RBP10.03□□□□□ -0.8
VAPB-201ENST00000265619 CEP120Q8N960 986 aa10.03□□□□□ -0.8
VAPB-201ENST00000265619 CTCFLQ8NI51 663 aaPredicted RBP10.03□□□□□ -0.8
VAPB-201ENST00000265619 AFAP1L1Q8TED9 768 aa10.03□□□□□ -0.8
VAPB-201ENST00000265619 MYH15Q9Y2K3 1946 aa10.03□□□□□ -0.8
VAPB-201ENST00000265619 ZNF202O95125 648 aa10.03□□□□□ -0.8
VAPB-201ENST00000265619 FAM160A1Q05DH4 1040 aa10.03□□□□□ -0.8
VAPB-201ENST00000265619 AKAP4Q5JQC9 854 aa10.03□□□□□ -0.8
VAPB-201ENST00000265619 MSANTD4Q8NCY6 345 aa10.03□□□□□ -0.8
VAPB-201ENST00000265619 PRDM16Q9HAZ2 1276 aa10.03□□□□□ -0.8
VAPB-201ENST00000265619 SLC27A2O14975 620 aa10.03□□□□□ -0.8
VAPB-201ENST00000265619 PROSER3Q2NL68 480 aa10.03□□□□□ -0.8
VAPB-201ENST00000265619 SDF4Q9BRK5 362 aa10.03□□□□□ -0.8
VAPB-201ENST00000265619 RCOR1Q9UKL0 485 aa10.03□□□□□ -0.8
VAPB-201ENST00000265619 UBAP1LF5GYI3 381 aa10.02□□□□□ -0.81
VAPB-201ENST00000265619 ZMYND10O75800 440 aa10.02□□□□□ -0.81
VAPB-201ENST00000265619 TUBB4AP04350 444 aa10.02□□□□□ -0.81
VAPB-201ENST00000265619 PDCP20941 246 aa10.02□□□□□ -0.81
VAPB-201ENST00000265619 ME1P48163 572 aa10.02□□□□□ -0.81
VAPB-201ENST00000265619 CCDC73Q6ZRK6 1079 aa10.02□□□□□ -0.81
VAPB-201ENST00000265619 GIMAP7Q8NHV1 300 aa10.02□□□□□ -0.81
VAPB-201ENST00000265619 PCDHA7Q9UN72 937 aa10.02□□□□□ -0.81
VAPB-201ENST00000265619 LTN1O94822 1766 aa10.02□□□□□ -0.81
VAPB-201ENST00000265619 PI4KAP2A4QPH2 592 aa10.02□□□□□ -0.81
VAPB-201ENST00000265619 SURF6O75683 361 aaKnown RBP10.02□□□□□ -0.81
VAPB-201ENST00000265619 CHGBP05060 677 aa10.02□□□□□ -0.81
VAPB-201ENST00000265619 IRAK1P51617 712 aa10.02□□□□□ -0.81
VAPB-201ENST00000265619 UBASH3AP57075 661 aa10.02□□□□□ -0.81
VAPB-201ENST00000265619 NBPF20Q3BBV1 942 aa10.02□□□□□ -0.81
VAPB-201ENST00000265619 PDILTQ8N807 584 aa10.02□□□□□ -0.81
VAPB-201ENST00000265619 PI4KAP1Q8N8J0 262 aa10.02□□□□□ -0.81
VAPB-201ENST00000265619 KCNB2Q92953 911 aa10.02□□□□□ -0.81
VAPB-201ENST00000265619 KIAA1468Q9P260 1216 aa10.02□□□□□ -0.81
VAPB-201ENST00000265619 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.02□□□□□ -0.81
VAPB-201ENST00000265619 GIGYF1O75420 1035 aaPredicted RBP10.01□□□□□ -0.81
VAPB-201ENST00000265619 CFAP100Q494V2 611 aa10.01□□□□□ -0.81
VAPB-201ENST00000265619 HSP90B2PQ58FF3 399 aa10.01□□□□□ -0.81
VAPB-201ENST00000265619 ERC1Q8IUD2 1116 aa10.01□□□□□ -0.81
VAPB-201ENST00000265619 JMYQ8N9B5 988 aa10.01□□□□□ -0.81
VAPB-201ENST00000265619 RHPN1Q8TCX5 695 aa10.01□□□□□ -0.81
VAPB-201ENST00000265619 TM6SF1Q9BZW5 370 aa10.01□□□□□ -0.81
VAPB-201ENST00000265619 GRIN2DO15399 1336 aa10.01□□□□□ -0.81
VAPB-201ENST00000265619 RGPD2P0DJD1 1756 aa10.01□□□□□ -0.81
VAPB-201ENST00000265619 STRCP1A6NGW2 1772 aa10.01□□□□□ -0.81
VAPB-201ENST00000265619 SOWAHDA6NJG2 315 aa10.01□□□□□ -0.81
VAPB-201ENST00000265619 H3BQV1 296 aa10.01□□□□□ -0.81
VAPB-201ENST00000265619 CTAGE5O15320 804 aa10.01□□□□□ -0.81
VAPB-201ENST00000265619 EPB41L2O43491 1005 aaKnown RBP10.01□□□□□ -0.81
VAPB-201ENST00000265619 EIF3JO75822 258 aaKnown RBP10.01□□□□□ -0.81
VAPB-201ENST00000265619 INPP5BP32019 993 aa10.01□□□□□ -0.81
VAPB-201ENST00000265619 AMOTQ4VCS5 1084 aa10.01□□□□□ -0.81
VAPB-201ENST00000265619 IFFO2Q5TF58 517 aa10.01□□□□□ -0.81
VAPB-201ENST00000265619 CNTROBQ8N137 903 aa10.01□□□□□ -0.81
VAPB-201ENST00000265619 XAGE2Q96GT9 111 aa10.01□□□□□ -0.81
VAPB-201ENST00000265619 AGPSO00116 658 aa10.01□□□□□ -0.81
VAPB-201ENST00000265619 GGCXP38435 758 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms