RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 TLDC2A0PJX2 215 aa13.62□□□□□ -0.23
COL8A1-201ENST00000261037 SLU7O95391 586 aaKnown RBP13.62□□□□□ -0.23
COL8A1-201ENST00000261037 PSMC4P43686 418 aa13.62□□□□□ -0.23
COL8A1-201ENST00000261037 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.62□□□□□ -0.23
COL8A1-201ENST00000261037 OTUD7AQ8TE49 926 aaPredicted RBP13.62□□□□□ -0.23
COL8A1-201ENST00000261037 DDX23Q9BUQ8 820 aaKnown RBP13.62□□□□□ -0.23
COL8A1-201ENST00000261037 BTG4Q9NY30 223 aa13.62□□□□□ -0.23
COL8A1-201ENST00000261037 DDX39AO00148 427 aaKnown RBP13.62□□□□□ -0.23
COL8A1-201ENST00000261037 SV2BQ7L1I2 683 aa13.62□□□□□ -0.23
COL8A1-201ENST00000261037 MAEAQ7L5Y9 396 aa13.62□□□□□ -0.23
COL8A1-201ENST00000261037 MAPK8IP1Q9UQF2 711 aa13.62□□□□□ -0.23
COL8A1-201ENST00000261037 NDUFB9Q9Y6M9 179 aa13.62□□□□□ -0.23
COL8A1-201ENST00000261037 SOS1Q07889 1333 aaPredicted RBP13.62□□□□□ -0.23
COL8A1-201ENST00000261037 POLD1P28340 1107 aa13.62□□□□□ -0.23
COL8A1-201ENST00000261037 CTDSPL2Q05D32 466 aa13.62□□□□□ -0.23
COL8A1-201ENST00000261037 BRAPQ7Z569 592 aa13.62□□□□□ -0.23
COL8A1-201ENST00000261037 DCAF5Q96JK2 942 aa13.62□□□□□ -0.23
COL8A1-201ENST00000261037 MNAT1P51948 309 aa13.61□□□□□ -0.23
COL8A1-201ENST00000261037 HSPA2P54652 639 aa13.61□□□□□ -0.23
COL8A1-201ENST00000261037 UBLCP1Q8WVY7 318 aaPredicted RBP13.61□□□□□ -0.23
COL8A1-201ENST00000261037 USP26Q9BXU7 913 aa13.61□□□□□ -0.23
COL8A1-201ENST00000261037 NCOA5Q9HCD5 579 aaKnown RBP13.61□□□□□ -0.23
COL8A1-201ENST00000261037 HELLSQ9NRZ9 838 aa13.61□□□□□ -0.23
COL8A1-201ENST00000261037 A0A1W2PP64 1363 aa13.61□□□□□ -0.23
COL8A1-201ENST00000261037 A0A1B0GUL7 405 aa13.61□□□□□ -0.23
COL8A1-201ENST00000261037 TRAPPC3LQ5T215 181 aa13.61□□□□□ -0.23
COL8A1-201ENST00000261037 MRRFQ96E11 262 aaKnown RBP13.61□□□□□ -0.23
COL8A1-201ENST00000261037 TAF5LO75529 589 aa13.61□□□□□ -0.23
COL8A1-201ENST00000261037 RNASE9P60153 205 aaKnown RBP13.61□□□□□ -0.23
COL8A1-201ENST00000261037 ZBTB16Q05516 673 aa13.61□□□□□ -0.23
COL8A1-201ENST00000261037 BIRC3Q13489 604 aa13.61□□□□□ -0.23
COL8A1-201ENST00000261037 UAP1Q16222 522 aaPredicted RBP13.61□□□□□ -0.23
COL8A1-201ENST00000261037 ATP2A1O14983 1001 aa13.61□□□□□ -0.23
COL8A1-201ENST00000261037 ZEB2O60315 1214 aa13.61□□□□□ -0.23
COL8A1-201ENST00000261037 RPS6KB1P23443 525 aa13.61□□□□□ -0.23
COL8A1-201ENST00000261037 EYA3Q99504 573 aa13.61□□□□□ -0.23
COL8A1-201ENST00000261037 MAK16Q9BXY0 300 aaKnown RBP13.61□□□□□ -0.23
COL8A1-201ENST00000261037 DENND2AQ9ULE3 1009 aa13.61□□□□□ -0.23
COL8A1-201ENST00000261037 CCDC169A6NNP5 214 aa13.61□□□□□ -0.23
COL8A1-201ENST00000261037 SLC27A2O14975 620 aa13.61□□□□□ -0.23
COL8A1-201ENST00000261037 GCP02774 474 aa13.61□□□□□ -0.23
COL8A1-201ENST00000261037 NOC4LQ9BVI4 516 aaKnown RBP13.61□□□□□ -0.23
COL8A1-201ENST00000261037 TRAF5O00463 557 aa13.6□□□□□ -0.23
COL8A1-201ENST00000261037 TAF12Q16514 161 aa13.6□□□□□ -0.23
COL8A1-201ENST00000261037 VPS16Q9H269 839 aa13.6□□□□□ -0.23
COL8A1-201ENST00000261037 ATP7AQ04656 1500 aa13.6□□□□□ -0.23
COL8A1-201ENST00000261037 ARHGEF12Q9NZN5 1544 aa13.6□□□□□ -0.23
COL8A1-201ENST00000261037 PRDM1O75626 825 aa13.6□□□□□ -0.23
COL8A1-201ENST00000261037 ERCC3P19447 782 aa13.6□□□□□ -0.23
COL8A1-201ENST00000261037 FRMD4BQ9Y2L6 1034 aa13.6□□□□□ -0.23
COL8A1-201ENST00000261037 PDE4DQ08499 809 aa13.6□□□□□ -0.23
COL8A1-201ENST00000261037 TNNI3KQ59H18 835 aa13.6□□□□□ -0.23
COL8A1-201ENST00000261037 IQUBQ8NA54 791 aa13.6□□□□□ -0.23
COL8A1-201ENST00000261037 MYL10Q9BUA6 226 aa13.6□□□□□ -0.23
COL8A1-201ENST00000261037 ZBTB40Q9NUA8 1239 aa13.6□□□□□ -0.23
COL8A1-201ENST00000261037 LUC7L2Q9Y383 392 aaKnown RBP13.6□□□□□ -0.23
COL8A1-201ENST00000261037 FPGT-TNNI3KV9GXZ4 949 aa13.6□□□□□ -0.23
COL8A1-201ENST00000261037 ELP1O95163 1332 aa13.6□□□□□ -0.23
COL8A1-201ENST00000261037 PPARDQ03181 441 aa13.6□□□□□ -0.23
COL8A1-201ENST00000261037 STMN4Q9H169 189 aaPredicted RBP13.6□□□□□ -0.23
COL8A1-201ENST00000261037 ZNF408Q9H9D4 720 aa13.6□□□□□ -0.23
COL8A1-201ENST00000261037 AATFQ9NY61 560 aaKnown RBP eCLIP13.6□□□□□ -0.23
COL8A1-201ENST00000261037 CEP83Q9Y592 693 aa13.6□□□□□ -0.23
COL8A1-201ENST00000261037 EPB41P11171 864 aaKnown RBP13.59□□□□□ -0.23
COL8A1-201ENST00000261037 OTUD7BQ6GQQ9 843 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 CNBD1Q8NA66 436 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 XAGE2Q96GT9 111 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 RASA3Q14644 834 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 CCDC122Q5T0U0 273 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 CCDC65Q8IXS2 484 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 MAST1Q9Y2H9 1570 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 ZKSCAN5Q9Y2L8 839 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.59□□□□□ -0.23
COL8A1-201ENST00000261037 POLR3AO14802 1390 aaPredicted RBP13.59□□□□□ -0.23
COL8A1-201ENST00000261037 PRKG1Q13976 671 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 LONRF3Q496Y0 759 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 SEL1L2Q5TEA6 688 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 ZMYM3Q14202 1370 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 PARD3Q8TEW0 1356 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 CCDC160A6NGH7 325 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 B4DLN1 442 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 MYCLP12524 364 aaPredicted RBP13.59□□□□□ -0.23
COL8A1-201ENST00000261037 MRPL12P52815 198 aaKnown RBP13.59□□□□□ -0.23
COL8A1-201ENST00000261037 NCAPH2Q6IBW4 605 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 ADGRL2O95490 1459 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 CAPN2P17655 700 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 TXKP42681 527 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 FNBP4Q8N3X1 1017 aaPredicted RBP13.59□□□□□ -0.23
COL8A1-201ENST00000261037 FAM227BQ96M60 508 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 TBC1D7Q9P0N9 293 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 FAM169AQ9Y6X4 670 aa13.59□□□□□ -0.23
COL8A1-201ENST00000261037 DBNDD2Q9BQY9 259 aa13.58□□□□□ -0.24
COL8A1-201ENST00000261037 CARD14Q9BXL6 1004 aa13.58□□□□□ -0.24
COL8A1-201ENST00000261037 BIN2Q9UBW5 565 aaPredicted RBP13.58□□□□□ -0.24
COL8A1-201ENST00000261037 AGTPBP1Q9UPW5 1226 aa13.58□□□□□ -0.24
COL8A1-201ENST00000261037 AKR1B15C9JRZ8 316 aaPredicted RBP13.58□□□□□ -0.24
COL8A1-201ENST00000261037 HIBADHP31937 336 aaKnown RBP13.58□□□□□ -0.24
COL8A1-201ENST00000261037 PPP1R21Q6ZMI0 780 aa13.58□□□□□ -0.24
COL8A1-201ENST00000261037 CCDC121Q6ZUS5 278 aa13.58□□□□□ -0.24
COL8A1-201ENST00000261037 MICALL1Q8N3F8 863 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms