RNA–Protein interactions for RNA: ENST00000258387.5

PAX3-201, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-201ENST00000258387 IL15P40933 162 aaPredicted RBP23.28■■□□□ 1.32
PAX3-201ENST00000258387 PHKA1P46020 1223 aa23.28■■□□□ 1.32
PAX3-201ENST00000258387 FAM151AQ8WW52 585 aa23.28■■□□□ 1.32
PAX3-201ENST00000258387 MEIS3Q99687 375 aa23.28■■□□□ 1.32
PAX3-201ENST00000258387 ZNF341Q9BYN7 854 aa23.28■■□□□ 1.32
PAX3-201ENST00000258387 USP40Q9NVE5 1235 aa23.28■■□□□ 1.32
PAX3-201ENST00000258387 CETPP11597 493 aa23.27■■□□□ 1.32
PAX3-201ENST00000258387 ADORA1P30542 326 aa23.27■■□□□ 1.32
PAX3-201ENST00000258387 INTS3Q68E01 1043 aaKnown RBP23.27■■□□□ 1.32
PAX3-201ENST00000258387 ARAP2Q8WZ64 1704 aa23.27■■□□□ 1.32
PAX3-201ENST00000258387 POTEFA5A3E0 1075 aa23.26■■□□□ 1.31
PAX3-201ENST00000258387 WDHD1O75717 1129 aaPredicted RBP23.26■■□□□ 1.31
PAX3-201ENST00000258387 INPP5BP32019 993 aa23.26■■□□□ 1.31
PAX3-201ENST00000258387 RARSP54136 660 aaKnown RBP23.26■■□□□ 1.31
PAX3-201ENST00000258387 NFIAQ12857 509 aa23.26■■□□□ 1.31
PAX3-201ENST00000258387 SNAPC2Q13487 334 aa23.26■■□□□ 1.31
PAX3-201ENST00000258387 PRPF38BQ5VTL8 546 aaKnown RBP23.26■■□□□ 1.31
PAX3-201ENST00000258387 DENND2AQ9ULE3 1009 aa23.26■■□□□ 1.31
PAX3-201ENST00000258387 BTBD19C9JJ37 291 aa23.25■■□□□ 1.31
PAX3-201ENST00000258387 TIMM10P62072 90 aa23.25■■□□□ 1.31
PAX3-201ENST00000258387 PPIL2Q13356 520 aa23.25■■□□□ 1.31
PAX3-201ENST00000258387 COPRSQ9NQ92 184 aa23.25■■□□□ 1.31
PAX3-201ENST00000258387 OTOFQ9HC10 1997 aa23.24■■□□□ 1.31
PAX3-201ENST00000258387 ARHGEF6Q15052 776 aa23.24■■□□□ 1.31
PAX3-201ENST00000258387 CCDC102BQ68D86 513 aa23.24■■□□□ 1.31
PAX3-201ENST00000258387 ECM2O94769 699 aaPredicted RBP23.23■■□□□ 1.31
PAX3-201ENST00000258387 ZFPM1Q8IX07 1006 aa23.23■■□□□ 1.31
PAX3-201ENST00000258387 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.23■■□□□ 1.31
PAX3-201ENST00000258387 FAM198AQ9UFP1 575 aa23.23■■□□□ 1.31
PAX3-201ENST00000258387 HTTP42858 3142 aa23.23■■□□□ 1.31
PAX3-201ENST00000258387 SEMA3EO15041 775 aa23.22■■□□□ 1.31
PAX3-201ENST00000258387 TLR2O60603 784 aa23.22■■□□□ 1.31
PAX3-201ENST00000258387 PPATQ06203 517 aa23.22■■□□□ 1.31
PAX3-201ENST00000258387 ARMC5Q96C12 935 aa23.22■■□□□ 1.31
PAX3-201ENST00000258387 CCER2I3L3R5 266 aa23.21■■□□□ 1.31
PAX3-201ENST00000258387 SRGAP3O43295 1099 aa23.21■■□□□ 1.31
PAX3-201ENST00000258387 ABCF2Q9UG63 623 aa23.21■■□□□ 1.31
PAX3-201ENST00000258387 PTCH2Q9Y6C5 1203 aa23.21■■□□□ 1.31
PAX3-201ENST00000258387 SALL1Q9NSC2 1324 aa23.21■■□□□ 1.31
PAX3-201ENST00000258387 RPAP1Q9BWH6 1393 aaPredicted RBP23.21■■□□□ 1.31
PAX3-201ENST00000258387 GNAI3P08754 354 aa23.2■■□□□ 1.3
PAX3-201ENST00000258387 EN2P19622 333 aaPredicted RBP23.2■■□□□ 1.3
PAX3-201ENST00000258387 TFCP2Q12800 502 aa23.2■■□□□ 1.3
PAX3-201ENST00000258387 ARHGAP45Q92619 1136 aa23.2■■□□□ 1.3
PAX3-201ENST00000258387 ARHGAP39Q9C0H5 1083 aa23.2■■□□□ 1.3
PAX3-201ENST00000258387 ZNF112Q9UJU3 913 aa23.2■■□□□ 1.3
PAX3-201ENST00000258387 LAMB1P07942 1786 aa23.19■■□□□ 1.3
PAX3-201ENST00000258387 MYCP01106 439 aaPredicted RBP23.19■■□□□ 1.3
PAX3-201ENST00000258387 RASGRF1Q13972 1273 aa23.19■■□□□ 1.3
PAX3-201ENST00000258387 KIF22Q14807 665 aa23.19■■□□□ 1.3
PAX3-201ENST00000258387 DZIP1Q86YF9 867 aaKnown RBP23.19■■□□□ 1.3
PAX3-201ENST00000258387 ZGPATQ8N5A5 531 aaKnown RBP23.19■■□□□ 1.3
PAX3-201ENST00000258387 XAGE2Q96GT9 111 aa23.19■■□□□ 1.3
PAX3-201ENST00000258387 ZCCHC17Q9NP64 241 aaKnown RBP23.19■■□□□ 1.3
PAX3-201ENST00000258387 CENPFP49454 3210 aa23.19■■□□□ 1.3
PAX3-201ENST00000258387 A0A1B0GUL7 405 aa23.18■■□□□ 1.3
PAX3-201ENST00000258387 RGS3P49796 1198 aa23.18■■□□□ 1.3
PAX3-201ENST00000258387 SLC9C1Q4G0N8 1177 aa23.18■■□□□ 1.3
PAX3-201ENST00000258387 NBPF11Q86T75 865 aa23.18■■□□□ 1.3
PAX3-201ENST00000258387 FRAT1Q92837 279 aaPredicted RBP23.18■■□□□ 1.3
PAX3-201ENST00000258387 NEUROD6Q96NK8 337 aa23.18■■□□□ 1.3
PAX3-201ENST00000258387 TMEM106CQ9BVX2 250 aa23.18■■□□□ 1.3
PAX3-201ENST00000258387 CPA4Q9UI42 421 aa23.18■■□□□ 1.3
PAX3-201ENST00000258387 AKAP2Q9Y2D5 859 aa23.18■■□□□ 1.3
PAX3-201ENST00000258387 PDHXO00330 501 aa23.17■■□□□ 1.3
PAX3-201ENST00000258387 LACTBP83111 547 aaPredicted RBP23.17■■□□□ 1.3
PAX3-201ENST00000258387 ZSCAN29Q8IWY8 852 aaPredicted RBP23.17■■□□□ 1.3
PAX3-201ENST00000258387 TNNQ9UQP3 1299 aa23.17■■□□□ 1.3
PAX3-201ENST00000258387 IPO8O15397 1037 aaKnown RBP23.16■■□□□ 1.3
PAX3-201ENST00000258387 ANKRD23Q86SG2 305 aa23.16■■□□□ 1.3
PAX3-201ENST00000258387 ZNF333Q96JL9 665 aa23.16■■□□□ 1.3
PAX3-201ENST00000258387 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.16■■□□□ 1.3
PAX3-201ENST00000258387 BCAR3O75815 825 aa23.15■■□□□ 1.3
PAX3-201ENST00000258387 MVPQ14764 893 aaKnown RBP23.15■■□□□ 1.3
PAX3-201ENST00000258387 SPTY2D1Q68D10 685 aaPredicted RBP23.15■■□□□ 1.3
PAX3-201ENST00000258387 C17orf99Q6UX52 265 aa23.15■■□□□ 1.3
PAX3-201ENST00000258387 SLF2Q8IX21 1173 aa23.15■■□□□ 1.3
PAX3-201ENST00000258387 IDI2Q9BXS1 227 aa23.15■■□□□ 1.3
PAX3-201ENST00000258387 KCNH4Q9UQ05 1017 aa23.15■■□□□ 1.3
PAX3-201ENST00000258387 GAKO14976 1311 aa23.14■■□□□ 1.3
PAX3-201ENST00000258387 ENTPD3O75355 529 aa23.14■■□□□ 1.29
PAX3-201ENST00000258387 BTDP43251 543 aa23.14■■□□□ 1.29
PAX3-201ENST00000258387 PICALMQ13492 652 aa23.14■■□□□ 1.29
PAX3-201ENST00000258387 SLC4A8Q2Y0W8 1093 aa23.14■■□□□ 1.29
PAX3-201ENST00000258387 NOL9Q5SY16 702 aaKnown RBP23.14■■□□□ 1.29
PAX3-201ENST00000258387 GORABQ5T7V8 394 aa23.14■■□□□ 1.29
PAX3-201ENST00000258387 SH3BP5LQ7L8J4 393 aa23.14■■□□□ 1.29
PAX3-201ENST00000258387 SH3TC2Q8TF17 1288 aa23.14■■□□□ 1.29
PAX3-201ENST00000258387 CLUAP1Q96AJ1 413 aa23.14■■□□□ 1.29
PAX3-201ENST00000258387 GNAI2P04899 355 aa23.13■■□□□ 1.29
PAX3-201ENST00000258387 SLURP2P0DP57 97 aa23.13■■□□□ 1.29
PAX3-201ENST00000258387 TRIM27P14373 513 aa23.13■■□□□ 1.29
PAX3-201ENST00000258387 MTX1Q13505 466 aa23.13■■□□□ 1.29
PAX3-201ENST00000258387 ERICH6Q7L0X2 663 aa23.13■■□□□ 1.29
PAX3-201ENST00000258387 PICK1Q9NRD5 415 aa23.13■■□□□ 1.29
PAX3-201ENST00000258387 ZHX2Q9Y6X8 837 aa23.13■■□□□ 1.29
PAX3-201ENST00000258387 MKI67P46013 3256 aaKnown RBP23.13■■□□□ 1.29
PAX3-201ENST00000258387 PHF20L1A8MW92 1017 aa23.12■■□□□ 1.29
PAX3-201ENST00000258387 ZBTB22O15209 634 aa23.12■■□□□ 1.29
PAX3-201ENST00000258387 PSMC4P43686 418 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms