RNA–Protein interactions for RNA: ENST00000255304.8

USPL1-201, Transcript of ubiquitin specific peptidase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USPL1, Length 3,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1-201ENST00000255304 GPAA1O43292 621 aa8.77□□□□□ -1.01
USPL1-201ENST00000255304 IPO7O95373 1038 aaKnown RBP8.77□□□□□ -1.01
USPL1-201ENST00000255304 STX17P56962 302 aa8.77□□□□□ -1.01
USPL1-201ENST00000255304 NLRP5P59047 1200 aa8.77□□□□□ -1.01
USPL1-201ENST00000255304 ERCC6LQ2NKX8 1250 aa8.77□□□□□ -1.01
USPL1-201ENST00000255304 CNNM3Q8NE01 707 aa8.77□□□□□ -1.01
USPL1-201ENST00000255304 CTCFLQ8NI51 663 aaPredicted RBP8.77□□□□□ -1.01
USPL1-201ENST00000255304 KIF18AQ8NI77 898 aa8.77□□□□□ -1.01
USPL1-201ENST00000255304 SLC4A9Q96Q91 983 aa8.77□□□□□ -1.01
USPL1-201ENST00000255304 TANGO6Q9C0B7 1094 aa8.77□□□□□ -1.01
USPL1-201ENST00000255304 SAP30BPQ9UHR5 308 aaKnown RBP8.77□□□□□ -1.01
USPL1-201ENST00000255304 SLIT2O94813 1529 aa8.76□□□□□ -1.01
USPL1-201ENST00000255304 RNF113AO15541 343 aaKnown RBP8.76□□□□□ -1.01
USPL1-201ENST00000255304 E2F4Q16254 413 aa8.76□□□□□ -1.01
USPL1-201ENST00000255304 ANKRD20A12PQ8NF67 263 aa8.76□□□□□ -1.01
USPL1-201ENST00000255304 CCDC43Q96MW1 224 aaKnown RBP8.76□□□□□ -1.01
USPL1-201ENST00000255304 CDC5LQ99459 802 aaKnown RBP8.76□□□□□ -1.01
USPL1-201ENST00000255304 GREM2Q9H772 168 aa8.76□□□□□ -1.01
USPL1-201ENST00000255304 SEC31BQ9NQW1 1179 aa8.76□□□□□ -1.01
USPL1-201ENST00000255304 RAD50Q92878 1312 aa8.76□□□□□ -1.01
USPL1-201ENST00000255304 PCDH11XQ9BZA7 1347 aa8.76□□□□□ -1.01
USPL1-201ENST00000255304 PCDH11YQ9BZA8 1340 aa8.76□□□□□ -1.01
USPL1-201ENST00000255304 USP27XA6NNY8 438 aa8.76□□□□□ -1.01
USPL1-201ENST00000255304 KCNQ2O43526 872 aa8.76□□□□□ -1.01
USPL1-201ENST00000255304 GYG1P46976 350 aa8.76□□□□□ -1.01
USPL1-201ENST00000255304 PTPN14Q15678 1187 aa8.76□□□□□ -1.01
USPL1-201ENST00000255304 CCDC96Q2M329 555 aa8.76□□□□□ -1.01
USPL1-201ENST00000255304 CCDC152Q4G0S7 254 aa8.76□□□□□ -1.01
USPL1-201ENST00000255304 FBXO38Q6PIJ6 1188 aa8.76□□□□□ -1.01
USPL1-201ENST00000255304 NLRP3Q96P20 1036 aa8.76□□□□□ -1.01
USPL1-201ENST00000255304 UTP14AQ9BVJ6 771 aaKnown RBP8.76□□□□□ -1.01
USPL1-201ENST00000255304 RNF216Q9NWF9 866 aaPredicted RBP8.76□□□□□ -1.01
USPL1-201ENST00000255304 TPCN1Q9ULQ1 816 aa8.76□□□□□ -1.01
USPL1-201ENST00000255304 NAA16Q6N069 864 aaPredicted RBP8.76□□□□□ -1.01
USPL1-201ENST00000255304 ZNF444Q8N0Y2 327 aaPredicted RBP8.76□□□□□ -1.01
USPL1-201ENST00000255304 CRACR2BQ8N4Y2 399 aaPredicted RBP8.76□□□□□ -1.01
USPL1-201ENST00000255304 CCDC191Q8NCU4 936 aa8.76□□□□□ -1.01
USPL1-201ENST00000255304 SDR42E1Q8WUS8 393 aa8.76□□□□□ -1.01
USPL1-201ENST00000255304 EEF2KMTQ96G04 330 aa8.76□□□□□ -1.01
USPL1-201ENST00000255304 TTC41PQ6P2S7 1318 aa8.76□□□□□ -1.01
USPL1-201ENST00000255304 CPDO75976 1380 aa8.75□□□□□ -1.01
USPL1-201ENST00000255304 SASH1O94885 1247 aa8.75□□□□□ -1.01
USPL1-201ENST00000255304 MYCNP04198 464 aaPredicted RBP8.75□□□□□ -1.01
USPL1-201ENST00000255304 LMAN1P49257 510 aa8.75□□□□□ -1.01
USPL1-201ENST00000255304 BCAMP50895 628 aa8.75□□□□□ -1.01
USPL1-201ENST00000255304 SSRP1Q08945 709 aaKnown RBP8.75□□□□□ -1.01
USPL1-201ENST00000255304 WTAPQ15007 396 aa8.75□□□□□ -1.01
USPL1-201ENST00000255304 SOGA3Q5TF21 947 aa8.75□□□□□ -1.01
USPL1-201ENST00000255304 TMC6Q7Z403 805 aa8.75□□□□□ -1.01
USPL1-201ENST00000255304 MCM9Q9NXL9 1143 aa8.75□□□□□ -1.01
USPL1-201ENST00000255304 DDX41Q9UJV9 622 aaKnown RBP8.75□□□□□ -1.01
USPL1-201ENST00000255304 CDKL5O76039 1030 aa8.75□□□□□ -1.01
USPL1-201ENST00000255304 IDEP14735 1019 aa8.75□□□□□ -1.01
USPL1-201ENST00000255304 CHMP4BP1P59074 171 aa8.75□□□□□ -1.01
USPL1-201ENST00000255304 GABPB1Q06547 395 aaPredicted RBP8.75□□□□□ -1.01
USPL1-201ENST00000255304 DHX32Q7L7V1 743 aaKnown RBP8.75□□□□□ -1.01
USPL1-201ENST00000255304 AOPEPQ8N6M6 819 aa8.75□□□□□ -1.01
USPL1-201ENST00000255304 INCENPQ9NQS7 918 aa8.75□□□□□ -1.01
USPL1-201ENST00000255304 MAPK8IP1Q9UQF2 711 aa8.75□□□□□ -1.01
USPL1-201ENST00000255304 COL14A1Q05707 1796 aaKnown RBP8.75□□□□□ -1.01
USPL1-201ENST00000255304 DISP2A7MBM2 1401 aa8.75□□□□□ -1.01
USPL1-201ENST00000255304 SEC31AO94979 1220 aaKnown RBP8.75□□□□□ -1.01
USPL1-201ENST00000255304 ADD1P35611 737 aaKnown RBP8.75□□□□□ -1.01
USPL1-201ENST00000255304 RAD51AP2Q09MP3 1159 aa8.75□□□□□ -1.01
USPL1-201ENST00000255304 SYT10Q6XYQ8 523 aa8.75□□□□□ -1.01
USPL1-201ENST00000255304 UBA5Q9GZZ9 404 aa8.75□□□□□ -1.01
USPL1-201ENST00000255304 IL25Q9H293 177 aa8.75□□□□□ -1.01
USPL1-201ENST00000255304 PLEKHA4Q9H4M7 779 aa8.75□□□□□ -1.01
USPL1-201ENST00000255304 IGKV5-2P06315 115 aa8.74□□□□□ -1.01
USPL1-201ENST00000255304 PRR29P0C7W0 189 aa8.74□□□□□ -1.01
USPL1-201ENST00000255304 HSPA4P34932 840 aa8.74□□□□□ -1.01
USPL1-201ENST00000255304 ANAPC15P60006 121 aa8.74□□□□□ -1.01
USPL1-201ENST00000255304 MSL1Q68DK7 614 aa8.74□□□□□ -1.01
USPL1-201ENST00000255304 AATFQ9NY61 560 aaKnown RBP eCLIP8.74□□□□□ -1.01
USPL1-201ENST00000255304 KCNJ14Q9UNX9 436 aa8.74□□□□□ -1.01
USPL1-201ENST00000255304 UBR2Q8IWV8 1755 aa8.74□□□□□ -1.01
USPL1-201ENST00000255304 ARHGEF10O15013 1369 aa8.74□□□□□ -1.01
USPL1-201ENST00000255304 SH3TC1Q8TE82 1336 aa8.74□□□□□ -1.01
USPL1-201ENST00000255304 PHKA1P46020 1223 aa8.74□□□□□ -1.01
USPL1-201ENST00000255304 RPS6KB1P23443 525 aa8.74□□□□□ -1.01
USPL1-201ENST00000255304 TXLNAP40222 546 aa8.74□□□□□ -1.01
USPL1-201ENST00000255304 TEX35Q5T0J7 233 aa8.74□□□□□ -1.01
USPL1-201ENST00000255304 KBTBD3Q8NAB2 608 aa8.74□□□□□ -1.01
USPL1-201ENST00000255304 ANKRD7Q92527 254 aa8.74□□□□□ -1.01
USPL1-201ENST00000255304 TEX13AQ9BXU3 409 aaPredicted RBP8.74□□□□□ -1.01
USPL1-201ENST00000255304 RGS12O14924 1447 aa8.74□□□□□ -1.01
USPL1-201ENST00000255304 ZNF532Q9HCE3 1301 aa8.73□□□□□ -1.01
USPL1-201ENST00000255304 PARP4Q9UKK3 1724 aaKnown RBP8.73□□□□□ -1.01
USPL1-201ENST00000255304 TAF1P21675 1872 aa8.73□□□□□ -1.01
USPL1-201ENST00000255304 HMGB1P09429 215 aaKnown RBP8.73□□□□□ -1.01
USPL1-201ENST00000255304 LIG1P18858 919 aa8.73□□□□□ -1.01
USPL1-201ENST00000255304 HLFQ16534 295 aa8.73□□□□□ -1.01
USPL1-201ENST00000255304 GPR101Q96P66 508 aaPredicted RBP8.73□□□□□ -1.01
USPL1-201ENST00000255304 RABEP2Q9H5N1 569 aa8.73□□□□□ -1.01
USPL1-201ENST00000255304 HMG20BQ9P0W2 317 aa8.73□□□□□ -1.01
USPL1-201ENST00000255304 IBTKQ9P2D0 1353 aaPredicted RBP8.73□□□□□ -1.01
USPL1-201ENST00000255304 SMTNL1A8MU46 457 aa8.73□□□□□ -1.01
USPL1-201ENST00000255304 PATL2C9JE40 543 aaKnown RBP8.73□□□□□ -1.01
USPL1-201ENST00000255304 BRD1O95696 1058 aa8.73□□□□□ -1.01
USPL1-201ENST00000255304 CYP2E1P05181 493 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms