RNA–Protein interactions for RNA: ENST00000239849.8

TNFSF11-201, Transcript of TNF superfamily member 11, humanhuman

TSL 5 BASIC

Gene TNFSF11, Length 911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-201ENST00000239849 KSR2Q6VAB6 950 aa16.54■□□□□ 0.24
TNFSF11-201ENST00000239849 FASTKD5Q7L8L6 764 aaKnown RBP16.54■□□□□ 0.24
TNFSF11-201ENST00000239849 JAG2Q9Y219 1238 aa16.54■□□□□ 0.24
TNFSF11-201ENST00000239849 H7C1W4 665 aa16.53■□□□□ 0.24
TNFSF11-201ENST00000239849 CXCL11O14625 94 aa16.53■□□□□ 0.24
TNFSF11-201ENST00000239849 TAF5LO75529 589 aa16.53■□□□□ 0.24
TNFSF11-201ENST00000239849 IGKV5-2P06315 115 aa16.53■□□□□ 0.24
TNFSF11-201ENST00000239849 CSF1RP07333 972 aa16.53■□□□□ 0.24
TNFSF11-201ENST00000239849 UBE3BQ7Z3V4 1068 aa16.53■□□□□ 0.24
TNFSF11-201ENST00000239849 HMX1Q9NP08 348 aaPredicted RBP16.53■□□□□ 0.24
TNFSF11-201ENST00000239849 TAOK2Q9UL54 1235 aa16.53■□□□□ 0.24
TNFSF11-201ENST00000239849 SLC45A1Q9Y2W3 748 aa16.53■□□□□ 0.24
TNFSF11-201ENST00000239849 TNFRSF10AO00220 468 aa16.52■□□□□ 0.24
TNFSF11-201ENST00000239849 HMGCRP04035 888 aa16.52■□□□□ 0.24
TNFSF11-201ENST00000239849 CYP2C8P10632 490 aa16.52■□□□□ 0.24
TNFSF11-201ENST00000239849 CCDC30Q5VVM6 783 aa16.52■□□□□ 0.24
TNFSF11-201ENST00000239849 TEKT1Q969V4 418 aa16.52■□□□□ 0.24
TNFSF11-201ENST00000239849 FAM161BQ96MY7 647 aa16.52■□□□□ 0.24
TNFSF11-201ENST00000239849 COL2A1P02458 1487 aaPredicted RBP16.52■□□□□ 0.23
TNFSF11-201ENST00000239849 MYH3P11055 1940 aa16.52■□□□□ 0.23
TNFSF11-201ENST00000239849 NEURL1BA8MQ27 555 aa16.51■□□□□ 0.23
TNFSF11-201ENST00000239849 TDRD7Q8NHU6 1098 aaKnown RBP16.51■□□□□ 0.23
TNFSF11-201ENST00000239849 SMCR8Q8TEV9 937 aaPredicted RBP16.51■□□□□ 0.23
TNFSF11-201ENST00000239849 LBHD1Q9BQE6 289 aaPredicted RBP16.51■□□□□ 0.23
TNFSF11-201ENST00000239849 PI4KAP2A4QPH2 592 aa16.5■□□□□ 0.23
TNFSF11-201ENST00000239849 IFIT5Q13325 482 aaKnown RBP16.5■□□□□ 0.23
TNFSF11-201ENST00000239849 MOGSQ13724 837 aa16.5■□□□□ 0.23
TNFSF11-201ENST00000239849 NOL9Q5SY16 702 aaKnown RBP16.5■□□□□ 0.23
TNFSF11-201ENST00000239849 PI4KAP1Q8N8J0 262 aa16.5■□□□□ 0.23
TNFSF11-201ENST00000239849 TBC1D22AQ8WUA7 517 aa16.5■□□□□ 0.23
TNFSF11-201ENST00000239849 CDX2Q99626 313 aaPredicted RBP16.5■□□□□ 0.23
TNFSF11-201ENST00000239849 MRIQ9BWK5 157 aa16.5■□□□□ 0.23
TNFSF11-201ENST00000239849 MYH16Q9H6N6 1097 aa16.5■□□□□ 0.23
TNFSF11-201ENST00000239849 MBIPQ9NS73 344 aa16.5■□□□□ 0.23
TNFSF11-201ENST00000239849 TRIM35Q9UPQ4 493 aa16.5■□□□□ 0.23
TNFSF11-201ENST00000239849 SNAP23O00161 211 aa16.49■□□□□ 0.23
TNFSF11-201ENST00000239849 HIBADHP31937 336 aaKnown RBP16.49■□□□□ 0.23
TNFSF11-201ENST00000239849 INPP5BP32019 993 aa16.49■□□□□ 0.23
TNFSF11-201ENST00000239849 TJAP1Q5JTD0 557 aa16.49■□□□□ 0.23
TNFSF11-201ENST00000239849 GPAT2Q6NUI2 795 aa16.49■□□□□ 0.23
TNFSF11-201ENST00000239849 ZNF112Q9UJU3 913 aa16.49■□□□□ 0.23
TNFSF11-201ENST00000239849 OGDHLQ9ULD0 1010 aa16.49■□□□□ 0.23
TNFSF11-201ENST00000239849 MAST3O60307 1309 aa16.48■□□□□ 0.23
TNFSF11-201ENST00000239849 CALD1Q05682 793 aaKnown RBP16.48■□□□□ 0.23
TNFSF11-201ENST00000239849 CWF19L2Q2TBE0 894 aaKnown RBP16.48■□□□□ 0.23
TNFSF11-201ENST00000239849 MIGA2Q7L4E1 593 aa16.48■□□□□ 0.23
TNFSF11-201ENST00000239849 ZDHHC15Q96MV8 337 aa16.48■□□□□ 0.23
TNFSF11-201ENST00000239849 ALPK3Q96L96 1907 aa16.48■□□□□ 0.23
TNFSF11-201ENST00000239849 CACNB3P54284 484 aa16.47■□□□□ 0.23
TNFSF11-201ENST00000239849 MDM2Q00987 491 aaPredicted RBP16.47■□□□□ 0.23
TNFSF11-201ENST00000239849 A0A0G2JLL6 359 aaPredicted RBP16.46■□□□□ 0.23
TNFSF11-201ENST00000239849 UBE4AQ14139 1066 aa16.46■□□□□ 0.23
TNFSF11-201ENST00000239849 GCKRQ14397 625 aa16.46■□□□□ 0.23
TNFSF11-201ENST00000239849 PRRT2Q7Z6L0 340 aaPredicted RBP16.46■□□□□ 0.23
TNFSF11-201ENST00000239849 FAM151AQ8WW52 585 aa16.46■□□□□ 0.23
TNFSF11-201ENST00000239849 RUNDC1Q96C34 613 aa16.46■□□□□ 0.23
TNFSF11-201ENST00000239849 PNMA3Q9UL41 463 aa16.46■□□□□ 0.23
TNFSF11-201ENST00000239849 MGAMO43451 1857 aa16.46■□□□□ 0.22
TNFSF11-201ENST00000239849 ELL2O00472 640 aaPredicted RBP16.45■□□□□ 0.22
TNFSF11-201ENST00000239849 FOSL2P15408 326 aa16.45■□□□□ 0.22
TNFSF11-201ENST00000239849 GNAI1P63096 354 aa16.45■□□□□ 0.22
TNFSF11-201ENST00000239849 TAF7LQ5H9L4 462 aa16.45■□□□□ 0.22
TNFSF11-201ENST00000239849 VPS37DQ86XT2 251 aa16.45■□□□□ 0.22
TNFSF11-201ENST00000239849 STK31Q9BXU1 1019 aa16.45■□□□□ 0.22
TNFSF11-201ENST00000239849 SEMA6BQ9H3T3 888 aa16.45■□□□□ 0.22
TNFSF11-201ENST00000239849 PICK1Q9NRD5 415 aa16.45■□□□□ 0.22
TNFSF11-201ENST00000239849 CNNM1Q9NRU3 951 aa16.45■□□□□ 0.22
TNFSF11-201ENST00000239849 IFT57Q9NWB7 429 aa16.45■□□□□ 0.22
TNFSF11-201ENST00000239849 SUGT1Q9Y2Z0 365 aa16.45■□□□□ 0.22
TNFSF11-201ENST00000239849 FAM110CQ1W6H9 321 aa16.44■□□□□ 0.22
TNFSF11-201ENST00000239849 LDHAL6AQ6ZMR3 332 aa16.44■□□□□ 0.22
TNFSF11-201ENST00000239849 PRKAG2Q9UGJ0 569 aa16.44■□□□□ 0.22
TNFSF11-201ENST00000239849 PFASO15067 1338 aa16.44■□□□□ 0.22
TNFSF11-201ENST00000239849 DDX60LQ5H9U9 1706 aaKnown RBP16.43■□□□□ 0.22
TNFSF11-201ENST00000239849 PLIN1O60240 522 aa16.43■□□□□ 0.22
TNFSF11-201ENST00000239849 FRAT2O75474 233 aaPredicted RBP16.43■□□□□ 0.22
TNFSF11-201ENST00000239849 ZNF853P0CG23 659 aa16.43■□□□□ 0.22
TNFSF11-201ENST00000239849 COL6A1P12109 1028 aa16.43■□□□□ 0.22
TNFSF11-201ENST00000239849 HOXD11P31277 338 aaPredicted RBP16.43■□□□□ 0.22
TNFSF11-201ENST00000239849 CCDC57Q2TAC2 916 aa16.43■□□□□ 0.22
TNFSF11-201ENST00000239849 GADL1Q6ZQY3 521 aa16.43■□□□□ 0.22
TNFSF11-201ENST00000239849 CHMP3Q9Y3E7 222 aa16.43■□□□□ 0.22
TNFSF11-201ENST00000239849 TMEM265A0A087WTH1 108 aa16.42■□□□□ 0.22
TNFSF11-201ENST00000239849 GYG1P46976 350 aa16.42■□□□□ 0.22
TNFSF11-201ENST00000239849 CASP7P55210 303 aa16.42■□□□□ 0.22
TNFSF11-201ENST00000239849 APOBEC3HQ6NTF7 200 aaKnown RBP16.42■□□□□ 0.22
TNFSF11-201ENST00000239849 HHIPL2Q6UWX4 724 aa16.42■□□□□ 0.22
TNFSF11-201ENST00000239849 CCDC146Q8IYE0 955 aa16.42■□□□□ 0.22
TNFSF11-201ENST00000239849 TRMT44Q8IYL2 757 aaKnown RBP16.42■□□□□ 0.22
TNFSF11-201ENST00000239849 ANKRD13CQ8N6S4 541 aa16.42■□□□□ 0.22
TNFSF11-201ENST00000239849 FAM84BQ96KN1 310 aaPredicted RBP16.42■□□□□ 0.22
TNFSF11-201ENST00000239849 ZHX2Q9Y6X8 837 aa16.42■□□□□ 0.22
TNFSF11-201ENST00000239849 GCLCP48506 637 aaPredicted RBP16.41■□□□□ 0.22
TNFSF11-201ENST00000239849 SMAD3P84022 425 aaKnown RBP16.41■□□□□ 0.22
TNFSF11-201ENST00000239849 SCYL3Q8IZE3 742 aa16.41■□□□□ 0.22
TNFSF11-201ENST00000239849 MYLIPQ8WY64 445 aa16.41■□□□□ 0.22
TNFSF11-201ENST00000239849 LRRC26Q2I0M4 334 aa16.4■□□□□ 0.22
TNFSF11-201ENST00000239849 CAVIN4Q5BKX8 364 aa16.4■□□□□ 0.22
TNFSF11-201ENST00000239849 LINS1Q8NG48 757 aa16.4■□□□□ 0.22
TNFSF11-201ENST00000239849 AGTPBP1Q9UPW5 1226 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms