RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 CNGA1P29973 690 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 CHMP6Q96FZ7 201 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 EHBP1L1Q8N3D4 1523 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 GOLGA6CA6NDK9 693 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 GOLGA6BA6NDN3 693 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 GOLGA6DP0CG33 693 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 MCMDC2Q4G0Z9 681 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 GOLGA6AQ9NYA3 693 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 EMILIN1Q9Y6C2 1016 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 MSH6P52701 1360 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 KRT83P78385 493 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 TCP10Q12799 353 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 CALCOCO2Q13137 446 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 PHF8Q9UPP1 1060 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 BRF1Q92994 677 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 MED10Q9BTT4 135 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 TBC1D7Q9P0N9 293 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 SKILP12757 684 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 ITKQ08881 620 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 ZSCAN23Q3MJ62 389 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 CCDC141Q6ZP82 1450 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 KCNA4P22459 653 aa14.78□□□□□ -0.04
NEK9-201ENST00000238616 ZCRB1Q8TBF4 217 aaKnown RBP14.78□□□□□ -0.04
NEK9-201ENST00000238616 LETM2Q2VYF4 491 aa14.77□□□□□ -0.04
NEK9-201ENST00000238616 TXNDC9O14530 226 aa14.77□□□□□ -0.04
NEK9-201ENST00000238616 CALML3P27482 149 aa14.77□□□□□ -0.04
NEK9-201ENST00000238616 WDR66Q8TBY9 1149 aa14.77□□□□□ -0.04
NEK9-201ENST00000238616 PPP1R12CQ9BZL4 782 aa14.77□□□□□ -0.04
NEK9-201ENST00000238616 PTPN23Q9H3S7 1636 aa14.77□□□□□ -0.04
NEK9-201ENST00000238616 RAD51AP2Q09MP3 1159 aa14.77□□□□□ -0.04
NEK9-201ENST00000238616 SPATA17Q96L03 361 aa14.77□□□□□ -0.04
NEK9-201ENST00000238616 MAPK8IP1Q9UQF2 711 aa14.77□□□□□ -0.04
NEK9-201ENST00000238616 CCDC122Q5T0U0 273 aa14.77□□□□□ -0.04
NEK9-201ENST00000238616 DDX27Q96GQ7 796 aaKnown RBP14.77□□□□□ -0.04
NEK9-201ENST00000238616 PAG1Q9NWQ8 432 aa14.77□□□□□ -0.04
NEK9-201ENST00000238616 GNA11P29992 359 aa14.77□□□□□ -0.05
NEK9-201ENST00000238616 KSR1Q8IVT5 923 aa14.77□□□□□ -0.05
NEK9-201ENST00000238616 GABPB2Q8TAK5 448 aaPredicted RBP14.77□□□□□ -0.05
NEK9-201ENST00000238616 NKIRAS1Q9NYS0 192 aa14.77□□□□□ -0.05
NEK9-201ENST00000238616 NEDD9Q14511 834 aa14.77□□□□□ -0.05
NEK9-201ENST00000238616 RPS6KA2Q15349 733 aa14.77□□□□□ -0.05
NEK9-201ENST00000238616 DCLK2Q8N568 766 aa14.77□□□□□ -0.05
NEK9-201ENST00000238616 SMCR8Q8TEV9 937 aaPredicted RBP14.77□□□□□ -0.05
NEK9-201ENST00000238616 DZIP3Q86Y13 1208 aaKnown RBP14.77□□□□□ -0.05
NEK9-201ENST00000238616 CD2APQ9Y5K6 639 aa14.77□□□□□ -0.05
NEK9-201ENST00000238616 OATP04181 439 aa14.76□□□□□ -0.05
NEK9-201ENST00000238616 ALDH1L2Q3SY69 923 aa14.76□□□□□ -0.05
NEK9-201ENST00000238616 FYB2Q5VWT5 728 aa14.76□□□□□ -0.05
NEK9-201ENST00000238616 SEPT10Q9P0V9 454 aa14.76□□□□□ -0.05
NEK9-201ENST00000238616 TRAF5O00463 557 aa14.76□□□□□ -0.05
NEK9-201ENST00000238616 ARHGEF10LQ9HCE6 1279 aa14.76□□□□□ -0.05
NEK9-201ENST00000238616 PIK3R4Q99570 1358 aa14.76□□□□□ -0.05
NEK9-201ENST00000238616 DDB1Q16531 1140 aa14.76□□□□□ -0.05
NEK9-201ENST00000238616 SRGAP1Q7Z6B7 1085 aa14.76□□□□□ -0.05
NEK9-201ENST00000238616 CPXCR1Q8N123 301 aa14.76□□□□□ -0.05
NEK9-201ENST00000238616 BZW2Q9Y6E2 419 aaKnown RBP14.76□□□□□ -0.05
NEK9-201ENST00000238616 WDR7Q9Y4E6 1490 aa14.76□□□□□ -0.05
NEK9-201ENST00000238616 KIAA1107Q9UPP5 1409 aa14.76□□□□□ -0.05
NEK9-201ENST00000238616 PRPF6O94906 941 aaKnown RBP14.76□□□□□ -0.05
NEK9-201ENST00000238616 TBC1D8O95759 1140 aa14.76□□□□□ -0.05
NEK9-201ENST00000238616 C20orf194Q5TEA3 1177 aa14.76□□□□□ -0.05
NEK9-201ENST00000238616 CSRNP2Q9H175 543 aa14.76□□□□□ -0.05
NEK9-201ENST00000238616 SWAP70Q9UH65 585 aa14.76□□□□□ -0.05
NEK9-201ENST00000238616 RTL9Q8NET4 1388 aa14.76□□□□□ -0.05
NEK9-201ENST00000238616 RILPQ96NA2 401 aa14.76□□□□□ -0.05
NEK9-201ENST00000238616 IVLP07476 585 aa14.75□□□□□ -0.05
NEK9-201ENST00000238616 SLFN5Q08AF3 891 aa14.75□□□□□ -0.05
NEK9-201ENST00000238616 NAP1L4Q99733 375 aaKnown RBP14.75□□□□□ -0.05
NEK9-201ENST00000238616 VCX3BQ9H321 246 aa14.75□□□□□ -0.05
NEK9-201ENST00000238616 TRIM75PA6NK02 468 aa14.75□□□□□ -0.05
NEK9-201ENST00000238616 CASQ2O14958 399 aaPredicted RBP14.75□□□□□ -0.05
NEK9-201ENST00000238616 GPIHBP1Q8IV16 184 aa14.75□□□□□ -0.05
NEK9-201ENST00000238616 BMP15O95972 392 aa14.75□□□□□ -0.05
NEK9-201ENST00000238616 XAGE3Q8WTP9 111 aa14.75□□□□□ -0.05
NEK9-201ENST00000238616 TRIM31Q9BZY9 425 aa14.75□□□□□ -0.05
NEK9-201ENST00000238616 DNAJC25Q9H1X3 360 aa14.75□□□□□ -0.05
NEK9-201ENST00000238616 STK25O00506 426 aa14.75□□□□□ -0.05
NEK9-201ENST00000238616 PLCG2P16885 1265 aa14.75□□□□□ -0.05
NEK9-201ENST00000238616 MUM1L1Q5H9M0 696 aa14.75□□□□□ -0.05
NEK9-201ENST00000238616 CETN3O15182 167 aa14.75□□□□□ -0.05
NEK9-201ENST00000238616 LACTBP83111 547 aaPredicted RBP14.75□□□□□ -0.05
NEK9-201ENST00000238616 TPTE2Q6XPS3 522 aa14.75□□□□□ -0.05
NEK9-201ENST00000238616 CCDC26Q8TAB7 109 aa14.75□□□□□ -0.05
NEK9-201ENST00000238616 SPDYE2BA6NHP3 402 aa14.75□□□□□ -0.05
NEK9-201ENST00000238616 SPDYE6P0CI01 402 aa14.75□□□□□ -0.05
NEK9-201ENST00000238616 VAV2P52735 878 aa14.75□□□□□ -0.05
NEK9-201ENST00000238616 DCUN1D2Q6PH85 259 aa14.75□□□□□ -0.05
NEK9-201ENST00000238616 UTP14CQ5TAP6 766 aaKnown RBP14.74□□□□□ -0.05
NEK9-201ENST00000238616 NXNQ6DKJ4 435 aa14.74□□□□□ -0.05
NEK9-201ENST00000238616 GCNT3O95395 438 aa14.74□□□□□ -0.05
NEK9-201ENST00000238616 MYCP01106 439 aaPredicted RBP14.74□□□□□ -0.05
NEK9-201ENST00000238616 OLA1Q9NTK5 396 aaKnown RBP14.74□□□□□ -0.05
NEK9-201ENST00000238616 ZSCAN22P10073 491 aaPredicted RBP14.74□□□□□ -0.05
NEK9-201ENST00000238616 TRIM27P14373 513 aa14.74□□□□□ -0.05
NEK9-201ENST00000238616 FBLN1P23142 703 aa14.74□□□□□ -0.05
NEK9-201ENST00000238616 ATP5DP30049 168 aa14.74□□□□□ -0.05
NEK9-201ENST00000238616 RARSP54136 660 aaKnown RBP14.74□□□□□ -0.05
NEK9-201ENST00000238616 SLC12A2P55011 1212 aa14.74□□□□□ -0.05
NEK9-201ENST00000238616 GNPATO15228 680 aa14.74□□□□□ -0.05
NEK9-201ENST00000238616 SAT1P21673 171 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms