RNA–Protein interactions for RNA: ENST00000231524.13

TRIM23-201, Transcript of tripartite motif containing 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM23, Length 4,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-201ENST00000231524 VPS16Q9H269 839 aa11.08□□□□□ -0.64
TRIM23-201ENST00000231524 RTEL1Q9NZ71 1219 aa11.08□□□□□ -0.64
TRIM23-201ENST00000231524 TTF2Q9UNY4 1162 aaKnown RBP11.08□□□□□ -0.64
TRIM23-201ENST00000231524 PCDHA5Q9Y5H7 936 aa11.08□□□□□ -0.64
TRIM23-201ENST00000231524 CAPN7Q9Y6W3 813 aa11.08□□□□□ -0.64
TRIM23-201ENST00000231524 EDC4Q6P2E9 1401 aaKnown RBP11.08□□□□□ -0.64
TRIM23-201ENST00000231524 TMEM232C9JQI7 657 aa11.08□□□□□ -0.64
TRIM23-201ENST00000231524 RNF40O75150 1001 aa11.08□□□□□ -0.64
TRIM23-201ENST00000231524 CMA1P23946 247 aa11.08□□□□□ -0.64
TRIM23-201ENST00000231524 GBP2P32456 591 aaPredicted RBP11.08□□□□□ -0.64
TRIM23-201ENST00000231524 HLTFQ14527 1009 aaKnown RBP eCLIP11.08□□□□□ -0.64
TRIM23-201ENST00000231524 TMEM67Q5HYA8 995 aa11.08□□□□□ -0.64
TRIM23-201ENST00000231524 BEND3Q5T5X7 828 aa11.08□□□□□ -0.64
TRIM23-201ENST00000231524 TTC19Q6DKK2 380 aaPredicted RBP11.08□□□□□ -0.64
TRIM23-201ENST00000231524 LINC00301Q8NCQ3 95 aa11.08□□□□□ -0.64
TRIM23-201ENST00000231524 LRRC59Q96AG4 307 aaKnown RBP11.08□□□□□ -0.64
TRIM23-201ENST00000231524 CLIC6Q96NY7 704 aa11.08□□□□□ -0.64
TRIM23-201ENST00000231524 MTMR7Q9Y216 660 aa11.08□□□□□ -0.64
TRIM23-201ENST00000231524 KIDINS220Q9ULH0 1771 aa11.08□□□□□ -0.64
TRIM23-201ENST00000231524 VIRMAQ69YN4 1812 aaKnown RBP11.08□□□□□ -0.64
TRIM23-201ENST00000231524 PNPLA6Q8IY17 1366 aa11.08□□□□□ -0.64
TRIM23-201ENST00000231524 ZBTB43O43298 467 aa11.07□□□□□ -0.64
TRIM23-201ENST00000231524 TUBB2AQ13885 445 aa11.07□□□□□ -0.64
TRIM23-201ENST00000231524 MUM1L1Q5H9M0 696 aa11.07□□□□□ -0.64
TRIM23-201ENST00000231524 EFCAB13Q8IY85 973 aa11.07□□□□□ -0.64
TRIM23-201ENST00000231524 IL17REQ8NFR9 667 aa11.07□□□□□ -0.64
TRIM23-201ENST00000231524 DDX17Q92841 729 aaKnown RBP11.07□□□□□ -0.64
TRIM23-201ENST00000231524 SCLT1Q96NL6 688 aa11.07□□□□□ -0.64
TRIM23-201ENST00000231524 TUBB2BQ9BVA1 445 aa11.07□□□□□ -0.64
TRIM23-201ENST00000231524 MED4Q9NPJ6 270 aa11.07□□□□□ -0.64
TRIM23-201ENST00000231524 MARCH6O60337 910 aa11.07□□□□□ -0.64
TRIM23-201ENST00000231524 USO1O60763 962 aaKnown RBP11.07□□□□□ -0.64
TRIM23-201ENST00000231524 ZMYND10O75800 440 aa11.07□□□□□ -0.64
TRIM23-201ENST00000231524 TIMM10P62072 90 aa11.07□□□□□ -0.64
TRIM23-201ENST00000231524 VSTM4Q8IW00 320 aa11.07□□□□□ -0.64
TRIM23-201ENST00000231524 CCDC114Q96M63 670 aa11.07□□□□□ -0.64
TRIM23-201ENST00000231524 UBAC1Q9BSL1 405 aa11.07□□□□□ -0.64
TRIM23-201ENST00000231524 A0A087WUV0 522 aaPredicted RBP11.07□□□□□ -0.64
TRIM23-201ENST00000231524 E7EWF7 191 aa11.07□□□□□ -0.64
TRIM23-201ENST00000231524 IKBKBO14920 756 aa11.07□□□□□ -0.64
TRIM23-201ENST00000231524 LMBR1LQ6UX01 489 aa11.07□□□□□ -0.64
TRIM23-201ENST00000231524 COPS6Q7L5N1 327 aa11.07□□□□□ -0.64
TRIM23-201ENST00000231524 POTEDQ86YR6 584 aa11.07□□□□□ -0.64
TRIM23-201ENST00000231524 SLC35F6Q8N357 371 aa11.07□□□□□ -0.64
TRIM23-201ENST00000231524 MLKLQ8NB16 471 aa11.07□□□□□ -0.64
TRIM23-201ENST00000231524 INO80Q9ULG1 1556 aaPredicted RBP11.07□□□□□ -0.64
TRIM23-201ENST00000231524 TRIM21P19474 475 aaKnown RBP11.06□□□□□ -0.64
TRIM23-201ENST00000231524 TOGARAM2Q6ZUX3 1019 aa11.06□□□□□ -0.64
TRIM23-201ENST00000231524 SND1Q7KZF4 910 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRIM23-201ENST00000231524 XAGE3Q8WTP9 111 aa11.06□□□□□ -0.64
TRIM23-201ENST00000231524 IRX2Q9BZI1 471 aaPredicted RBP11.06□□□□□ -0.64
TRIM23-201ENST00000231524 GIGYF1O75420 1035 aaPredicted RBP11.06□□□□□ -0.64
TRIM23-201ENST00000231524 TBC1D8O95759 1140 aa11.06□□□□□ -0.64
TRIM23-201ENST00000231524 PDIA3P30101 505 aaKnown RBP11.06□□□□□ -0.64
TRIM23-201ENST00000231524 KRT9P35527 623 aa11.06□□□□□ -0.64
TRIM23-201ENST00000231524 POLA2Q14181 598 aa11.06□□□□□ -0.64
TRIM23-201ENST00000231524 CCDC96Q2M329 555 aa11.06□□□□□ -0.64
TRIM23-201ENST00000231524 AEBP2Q6ZN18 517 aaPredicted RBP11.06□□□□□ -0.64
TRIM23-201ENST00000231524 EHBP1Q8NDI1 1231 aa11.06□□□□□ -0.64
TRIM23-201ENST00000231524 TANGO6Q9C0B7 1094 aa11.06□□□□□ -0.64
TRIM23-201ENST00000231524 KRT86O43790 486 aa11.06□□□□□ -0.64
TRIM23-201ENST00000231524 GNGT1P63211 74 aa11.06□□□□□ -0.64
TRIM23-201ENST00000231524 TNNI3KQ59H18 835 aa11.06□□□□□ -0.64
TRIM23-201ENST00000231524 FMR1NBQ8N0W7 255 aaPredicted RBP11.06□□□□□ -0.64
TRIM23-201ENST00000231524 PHKBQ93100 1093 aa11.06□□□□□ -0.64
TRIM23-201ENST00000231524 AIDAQ96BJ3 306 aa11.06□□□□□ -0.64
TRIM23-201ENST00000231524 LGR6Q9HBX8 967 aa11.06□□□□□ -0.64
TRIM23-201ENST00000231524 FPGT-TNNI3KV9GXZ4 949 aa11.06□□□□□ -0.64
TRIM23-201ENST00000231524 REREQ9P2R6 1566 aa11.06□□□□□ -0.64
TRIM23-201ENST00000231524 LRRC7Q96NW7 1537 aa11.06□□□□□ -0.64
TRIM23-201ENST00000231524 CPSF1Q10570 1443 aaKnown RBP11.06□□□□□ -0.64
TRIM23-201ENST00000231524 MACROD2A1Z1Q3 448 aa11.06□□□□□ -0.64
TRIM23-201ENST00000231524 SOWAHDA6NJG2 315 aa11.06□□□□□ -0.64
TRIM23-201ENST00000231524 UBXN1Q04323 297 aa11.06□□□□□ -0.64
TRIM23-201ENST00000231524 CADPS2Q86UW7 1296 aa11.06□□□□□ -0.64
TRIM23-201ENST00000231524 PPFIA4O75335 1185 aa11.05□□□□□ -0.64
TRIM23-201ENST00000231524 POSTNQ15063 836 aa11.05□□□□□ -0.64
TRIM23-201ENST00000231524 B4GALNT4Q76KP1 1039 aa11.05□□□□□ -0.64
TRIM23-201ENST00000231524 VPS37DQ86XT2 251 aa11.05□□□□□ -0.64
TRIM23-201ENST00000231524 ANKRD18AQ8IVF6 992 aa11.05□□□□□ -0.64
TRIM23-201ENST00000231524 DPF2Q92785 391 aa11.05□□□□□ -0.64
TRIM23-201ENST00000231524 GJB4Q9NTQ9 266 aa11.05□□□□□ -0.64
TRIM23-201ENST00000231524 LCMT1Q9UIC8 334 aa11.05□□□□□ -0.64
TRIM23-201ENST00000231524 ROBO2Q9HCK4 1378 aa11.05□□□□□ -0.64
TRIM23-201ENST00000231524 CLGNO14967 610 aa11.05□□□□□ -0.64
TRIM23-201ENST00000231524 KCNQ3O43525 872 aa11.05□□□□□ -0.64
TRIM23-201ENST00000231524 EZRP15311 586 aaKnown RBP11.05□□□□□ -0.64
TRIM23-201ENST00000231524 ENOX2Q16206 610 aaKnown RBP11.05□□□□□ -0.64
TRIM23-201ENST00000231524 WHAMMP3Q1A5X7 153 aa11.05□□□□□ -0.64
TRIM23-201ENST00000231524 KRT40Q6A162 431 aa11.05□□□□□ -0.64
TRIM23-201ENST00000231524 MMS22LQ6ZRQ5 1243 aa11.05□□□□□ -0.64
TRIM23-201ENST00000231524 ANKRD13DQ6ZTN6 518 aa11.05□□□□□ -0.64
TRIM23-201ENST00000231524 TAX1BP1Q86VP1 789 aa11.05□□□□□ -0.64
TRIM23-201ENST00000231524 CNNM1Q9NRU3 951 aa11.05□□□□□ -0.64
TRIM23-201ENST00000231524 MYO6Q9UM54 1294 aa11.05□□□□□ -0.64
TRIM23-201ENST00000231524 LUC7L2Q9Y383 392 aaKnown RBP11.05□□□□□ -0.64
TRIM23-201ENST00000231524 SAMM50Q9Y512 469 aa11.05□□□□□ -0.64
TRIM23-201ENST00000231524 TAF6LQ9Y6J9 622 aa11.05□□□□□ -0.64
TRIM23-201ENST00000231524 PPRC1Q5VV67 1664 aaKnown RBP11.05□□□□□ -0.64
TRIM23-201ENST00000231524 KAT6BQ8WYB5 2073 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms