RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 NBPF12Q5TAG4 269 aaPredicted RBP15.5■□□□□ 0.07
LSM5-201ENST00000223084 CDAN1Q8IWY9 1227 aa15.5■□□□□ 0.07
LSM5-201ENST00000223084 NSUN4Q96CB9 384 aaKnown RBP15.5■□□□□ 0.07
LSM5-201ENST00000223084 CAPNS2Q96L46 248 aa15.5■□□□□ 0.07
LSM5-201ENST00000223084 TMEM39BQ9GZU3 492 aa15.5■□□□□ 0.07
LSM5-201ENST00000223084 ANTXR1Q9H6X2 564 aa15.5■□□□□ 0.07
LSM5-201ENST00000223084 USP40Q9NVE5 1235 aa15.5■□□□□ 0.07
LSM5-201ENST00000223084 TMOD2Q9NZR1 351 aa15.5■□□□□ 0.07
LSM5-201ENST00000223084 GAKO14976 1311 aa15.49■□□□□ 0.07
LSM5-201ENST00000223084 WDR33Q9C0J8 1336 aaKnown RBP15.49■□□□□ 0.07
LSM5-201ENST00000223084 NF2P35240 595 aa15.49■□□□□ 0.07
LSM5-201ENST00000223084 JMYQ8N9B5 988 aa15.49■□□□□ 0.07
LSM5-201ENST00000223084 FAM163AQ96GL9 167 aaPredicted RBP15.49■□□□□ 0.07
LSM5-201ENST00000223084 PPP2R3BQ9Y5P8 575 aa15.49■□□□□ 0.07
LSM5-201ENST00000223084 SSC5DA1L4H1 1573 aa15.49■□□□□ 0.07
LSM5-201ENST00000223084 MROH7-TTC4A0A0A0MT08 1334 aa15.48■□□□□ 0.07
LSM5-201ENST00000223084 BTDP43251 543 aa15.48■□□□□ 0.07
LSM5-201ENST00000223084 NFIAQ12857 509 aa15.48■□□□□ 0.07
LSM5-201ENST00000223084 SLF2Q8IX21 1173 aa15.48■□□□□ 0.07
LSM5-201ENST00000223084 TEPSINQ96N21 525 aa15.48■□□□□ 0.07
LSM5-201ENST00000223084 PAPPA2Q9BXP8 1791 aa15.48■□□□□ 0.07
LSM5-201ENST00000223084 AOC2O75106 756 aa15.47■□□□□ 0.07
LSM5-201ENST00000223084 TNNI2P48788 182 aa15.47■□□□□ 0.07
LSM5-201ENST00000223084 FKBP1BP68106 108 aa15.47■□□□□ 0.07
LSM5-201ENST00000223084 GSTO1P78417 241 aa15.47■□□□□ 0.07
LSM5-201ENST00000223084 TCP10Q12799 353 aa15.47■□□□□ 0.07
LSM5-201ENST00000223084 RGMBQ6NW40 437 aa15.47■□□□□ 0.07
LSM5-201ENST00000223084 EDC3Q96F86 508 aaKnown RBP15.47■□□□□ 0.07
LSM5-201ENST00000223084 HHIPL1Q96JK4 782 aa15.47■□□□□ 0.07
LSM5-201ENST00000223084 DNAJC2Q99543 621 aaKnown RBP15.47■□□□□ 0.07
LSM5-201ENST00000223084 BOLA2Q9H3K6 86 aa15.47■□□□□ 0.07
LSM5-201ENST00000223084 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.47■□□□□ 0.07
LSM5-201ENST00000223084 ANGEL1Q9UNK9 670 aaKnown RBP15.47■□□□□ 0.07
LSM5-201ENST00000223084 GPR75-ASB3A0A0A6YYF3 556 aa15.46■□□□□ 0.07
LSM5-201ENST00000223084 IDH1O75874 414 aaKnown RBP15.46■□□□□ 0.07
LSM5-201ENST00000223084 LDHCP07864 332 aa15.46■□□□□ 0.07
LSM5-201ENST00000223084 ECE1P42892 770 aa15.46■□□□□ 0.07
LSM5-201ENST00000223084 ZNF157P51786 506 aaPredicted RBP15.46■□□□□ 0.07
LSM5-201ENST00000223084 HDAC1Q13547 482 aaPredicted RBP15.46■□□□□ 0.07
LSM5-201ENST00000223084 SUPT20HL1Q3ZLR7 823 aa15.46■□□□□ 0.07
LSM5-201ENST00000223084 FKBP1CQ5VVH2 108 aa15.46■□□□□ 0.07
LSM5-201ENST00000223084 NAA16Q6N069 864 aaPredicted RBP15.46■□□□□ 0.07
LSM5-201ENST00000223084 ARMC9Q7Z3E5 817 aa15.46■□□□□ 0.07
LSM5-201ENST00000223084 ADGRA1Q86SQ6 560 aa15.46■□□□□ 0.07
LSM5-201ENST00000223084 ZFPM1Q8IX07 1006 aa15.46■□□□□ 0.07
LSM5-201ENST00000223084 PCDH10Q9P2E7 1040 aa15.46■□□□□ 0.07
LSM5-201ENST00000223084 FAM198AQ9UFP1 575 aa15.46■□□□□ 0.07
LSM5-201ENST00000223084 AK9Q5TCS8 1911 aa15.46■□□□□ 0.07
LSM5-201ENST00000223084 GOLIM4O00461 696 aa15.45■□□□□ 0.06
LSM5-201ENST00000223084 RHBDL3P58872 404 aa15.45■□□□□ 0.06
LSM5-201ENST00000223084 AAMPQ13685 434 aa15.45■□□□□ 0.06
LSM5-201ENST00000223084 TSHZ3Q63HK5 1081 aa15.45■□□□□ 0.06
LSM5-201ENST00000223084 FAM83AQ86UY5 434 aa15.45■□□□□ 0.06
LSM5-201ENST00000223084 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.45■□□□□ 0.06
LSM5-201ENST00000223084 ZIC5Q96T25 663 aa15.45■□□□□ 0.06
LSM5-201ENST00000223084 FAM155AB1AL88 458 aaPredicted RBP15.44■□□□□ 0.06
LSM5-201ENST00000223084 USP2O75604 605 aaPredicted RBP15.44■□□□□ 0.06
LSM5-201ENST00000223084 WDHD1O75717 1129 aaPredicted RBP15.44■□□□□ 0.06
LSM5-201ENST00000223084 IGHDP01880 384 aa15.44■□□□□ 0.06
LSM5-201ENST00000223084 ATP5JP18859 108 aa15.44■□□□□ 0.06
LSM5-201ENST00000223084 RGS3P49796 1198 aa15.44■□□□□ 0.06
LSM5-201ENST00000223084 ANKRD45Q5TZF3 282 aa15.44■□□□□ 0.06
LSM5-201ENST00000223084 OTUD7AQ8TE49 926 aaPredicted RBP15.44■□□□□ 0.06
LSM5-201ENST00000223084 FAM151AQ8WW52 585 aa15.44■□□□□ 0.06
LSM5-201ENST00000223084 DDX4Q9NQI0 724 aaKnown RBP15.44■□□□□ 0.06
LSM5-201ENST00000223084 PPP1R12BO60237 982 aaPredicted RBP15.43■□□□□ 0.06
LSM5-201ENST00000223084 CYP7A1P22680 504 aa15.43■□□□□ 0.06
LSM5-201ENST00000223084 PICALMQ13492 652 aa15.43■□□□□ 0.06
LSM5-201ENST00000223084 LDLRAD1Q5T700 205 aa15.43■□□□□ 0.06
LSM5-201ENST00000223084 MAGEB6Q8N7X4 407 aa15.43■□□□□ 0.06
LSM5-201ENST00000223084 SH3RF3Q8TEJ3 882 aaPredicted RBP15.43■□□□□ 0.06
LSM5-201ENST00000223084 HAUS7Q99871 368 aa15.43■□□□□ 0.06
LSM5-201ENST00000223084 IDI2Q9BXS1 227 aa15.43■□□□□ 0.06
LSM5-201ENST00000223084 RWDD1Q9H446 243 aaPredicted RBP15.43■□□□□ 0.06
LSM5-201ENST00000223084 ECHDC1Q9NTX5 307 aa15.43■□□□□ 0.06
LSM5-201ENST00000223084 AATFQ9NY61 560 aaKnown RBP eCLIP15.43■□□□□ 0.06
LSM5-201ENST00000223084 MAST2Q6P0Q8 1798 aa15.43■□□□□ 0.06
LSM5-201ENST00000223084 DOCK2Q92608 1830 aa15.43■□□□□ 0.06
LSM5-201ENST00000223084 RFX7Q2KHR2 1363 aa15.42■□□□□ 0.06
LSM5-201ENST00000223084 SLC10A3P09131 477 aa15.42■□□□□ 0.06
LSM5-201ENST00000223084 MAP3K12Q12852 859 aa15.42■□□□□ 0.06
LSM5-201ENST00000223084 TTF1Q15361 905 aaPredicted RBP15.42■□□□□ 0.06
LSM5-201ENST00000223084 MAP3K11Q16584 847 aa15.42■□□□□ 0.06
LSM5-201ENST00000223084 MIGA2Q7L4E1 593 aa15.42■□□□□ 0.06
LSM5-201ENST00000223084 RASAL3Q86YV0 1011 aa15.42■□□□□ 0.06
LSM5-201ENST00000223084 CCDC102AQ96A19 550 aa15.42■□□□□ 0.06
LSM5-201ENST00000223084 GCC1Q96CN9 775 aa15.42■□□□□ 0.06
LSM5-201ENST00000223084 CLMNQ96JQ2 1002 aa15.42■□□□□ 0.06
LSM5-201ENST00000223084 PAG1Q9NWQ8 432 aa15.42■□□□□ 0.06
LSM5-201ENST00000223084 PCNTO95613 3336 aa15.42■□□□□ 0.06
LSM5-201ENST00000223084 HSPA1AP0DMV8 641 aaKnown RBP15.41■□□□□ 0.06
LSM5-201ENST00000223084 HSPA1BP0DMV9 641 aaKnown RBP15.41■□□□□ 0.06
LSM5-201ENST00000223084 IREB2P48200 963 aaKnown RBP15.41■□□□□ 0.06
LSM5-201ENST00000223084 DYNLL1P63167 89 aaKnown RBP15.41■□□□□ 0.06
LSM5-201ENST00000223084 MKRN3Q13064 507 aaKnown RBP15.41■□□□□ 0.06
LSM5-201ENST00000223084 SLFNL1Q499Z3 407 aa15.41■□□□□ 0.06
LSM5-201ENST00000223084 SH3BP5LQ7L8J4 393 aa15.41■□□□□ 0.06
LSM5-201ENST00000223084 TEX11Q8IYF3 940 aa15.41■□□□□ 0.06
LSM5-201ENST00000223084 MIGA1Q8NAN2 632 aa15.41■□□□□ 0.06
LSM5-201ENST00000223084 NOL10Q9BSC4 688 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms