RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 CTAGE15A4D2H0 777 aa21.34■■□□□ 1.01
SMPD3-201ENST00000219334 VWA3AA6NCI4 1184 aa21.34■■□□□ 1.01
SMPD3-201ENST00000219334 PPIP5K2O43314 1243 aa21.34■■□□□ 1.01
SMPD3-201ENST00000219334 KRT86O43790 486 aa21.34■■□□□ 1.01
SMPD3-201ENST00000219334 CTAGE8P0CG41 777 aa21.34■■□□□ 1.01
SMPD3-201ENST00000219334 CTAGE6Q86UF2 777 aa21.34■■□□□ 1.01
SMPD3-201ENST00000219334 CTAGE4Q8IX94 777 aa21.34■■□□□ 1.01
SMPD3-201ENST00000219334 CCDC24Q8N4L8 307 aa21.34■■□□□ 1.01
SMPD3-201ENST00000219334 EDC4Q6P2E9 1401 aaKnown RBP21.34■■□□□ 1.01
SMPD3-201ENST00000219334 NDC80O14777 642 aa21.34■■□□□ 1.01
SMPD3-201ENST00000219334 MYCLP12524 364 aaPredicted RBP21.34■■□□□ 1.01
SMPD3-201ENST00000219334 G2E3Q7L622 706 aa21.34■■□□□ 1.01
SMPD3-201ENST00000219334 ZBTB40Q9NUA8 1239 aa21.34■■□□□ 1.01
SMPD3-201ENST00000219334 ZNF594Q96JF6 807 aaPredicted RBP21.34■■□□□ 1.01
SMPD3-201ENST00000219334 ATP6V0A2Q9Y487 856 aa21.34■■□□□ 1.01
SMPD3-201ENST00000219334 GPR162Q16538 588 aa21.34■■□□□ 1.01
SMPD3-201ENST00000219334 DCAF17Q5H9S7 520 aaPredicted RBP21.34■■□□□ 1.01
SMPD3-201ENST00000219334 CEP63Q96MT8 703 aa21.34■■□□□ 1.01
SMPD3-201ENST00000219334 TESK2Q96S53 571 aa21.34■■□□□ 1.01
SMPD3-201ENST00000219334 LGR6Q9HBX8 967 aa21.34■■□□□ 1.01
SMPD3-201ENST00000219334 GINS2Q9Y248 185 aa21.34■■□□□ 1.01
SMPD3-201ENST00000219334 POLR3GO15318 223 aaPredicted RBP21.33■■□□□ 1.01
SMPD3-201ENST00000219334 SKILP12757 684 aa21.33■■□□□ 1.01
SMPD3-201ENST00000219334 PPP1R2P41236 205 aa21.33■■□□□ 1.01
SMPD3-201ENST00000219334 RILPL1Q5EBL4 403 aa21.33■■□□□ 1.01
SMPD3-201ENST00000219334 PLEKHM2Q8IWE5 1019 aa21.33■■□□□ 1.01
SMPD3-201ENST00000219334 IRX3P78415 501 aaPredicted RBP21.33■■□□□ 1
SMPD3-201ENST00000219334 CPXCR1Q8N123 301 aa21.33■■□□□ 1
SMPD3-201ENST00000219334 MROH5Q6ZUA9 1318 aa21.33■■□□□ 1
SMPD3-201ENST00000219334 EPB41P11171 864 aaKnown RBP21.32■■□□□ 1
SMPD3-201ENST00000219334 BIVM-ERCC5R4GMW8 1640 aa21.32■■□□□ 1
SMPD3-201ENST00000219334 C6orf163Q5TEZ5 329 aa21.32■■□□□ 1
SMPD3-201ENST00000219334 STRN3Q13033 797 aa21.32■■□□□ 1
SMPD3-201ENST00000219334 EAPPQ56P03 285 aaPredicted RBP21.32■■□□□ 1
SMPD3-201ENST00000219334 AZI2Q9H6S1 392 aa21.32■■□□□ 1
SMPD3-201ENST00000219334 PAXBP1Q9Y5B6 917 aa21.32■■□□□ 1
SMPD3-201ENST00000219334 STX10O60499 249 aa21.32■■□□□ 1
SMPD3-201ENST00000219334 SYT1P21579 422 aa21.32■■□□□ 1
SMPD3-201ENST00000219334 NSMFQ6X4W1 530 aa21.32■■□□□ 1
SMPD3-201ENST00000219334 KIAA1524Q8TCG1 905 aa21.32■■□□□ 1
SMPD3-201ENST00000219334 TRAF5O00463 557 aa21.32■■□□□ 1
SMPD3-201ENST00000219334 PRDM1O75626 825 aa21.32■■□□□ 1
SMPD3-201ENST00000219334 IL13P35225 146 aa21.32■■□□□ 1
SMPD3-201ENST00000219334 TCP10Q12799 353 aa21.32■■□□□ 1
SMPD3-201ENST00000219334 RNF216Q9NWF9 866 aaPredicted RBP21.32■■□□□ 1
SMPD3-201ENST00000219334 BCS1LQ9Y276 419 aa21.32■■□□□ 1
SMPD3-201ENST00000219334 GPAA1O43292 621 aa21.31■■□□□ 1
SMPD3-201ENST00000219334 SNX21Q969T3 373 aa21.31■■□□□ 1
SMPD3-201ENST00000219334 RAPGEF1Q13905 1077 aa21.31■■□□□ 1
SMPD3-201ENST00000219334 ATL3Q6DD88 541 aa21.31■■□□□ 1
SMPD3-201ENST00000219334 RAB3IL1Q8TBN0 382 aa21.31■■□□□ 1
SMPD3-201ENST00000219334 TRIM6Q9C030 488 aaPredicted RBP21.31■■□□□ 1
SMPD3-201ENST00000219334 PIK3C2GO75747 1445 aa21.31■■□□□ 1
SMPD3-201ENST00000219334 SMCR8Q8TEV9 937 aaPredicted RBP21.31■■□□□ 1
SMPD3-201ENST00000219334 EXOC7Q9UPT5 735 aa21.31■■□□□ 1
SMPD3-201ENST00000219334 ABCC2Q92887 1545 aa21.31■■□□□ 1
SMPD3-201ENST00000219334 ARHGEF35A5YM69 484 aa21.31■■□□□ 1
SMPD3-201ENST00000219334 V9GY48 417 aaPredicted RBP21.31■■□□□ 1
SMPD3-201ENST00000219334 DDX17Q92841 729 aaKnown RBP21.3■■□□□ 1
SMPD3-201ENST00000219334 TNNQ9UQP3 1299 aa21.3■■□□□ 1
SMPD3-201ENST00000219334 STK24Q9Y6E0 443 aa21.3■■□□□ 1
SMPD3-201ENST00000219334 ERVV-2B6SEH9 535 aa21.3■■□□□ 1
SMPD3-201ENST00000219334 TNFAIP1Q13829 316 aa21.3■■□□□ 1
SMPD3-201ENST00000219334 DPY19L2Q6NUT2 758 aa21.3■■□□□ 1
SMPD3-201ENST00000219334 TXNDC16Q9P2K2 825 aa21.3■■□□□ 1
SMPD3-201ENST00000219334 PTPRKQ15262 1439 aa21.3■■□□□ 1
SMPD3-201ENST00000219334 KLHDC4Q8TBB5 520 aa21.3■■□□□ 1
SMPD3-201ENST00000219334 CCDC129Q6ZRS4 1044 aa21.29■■□□□ 1
SMPD3-201ENST00000219334 ANGEL1Q9UNK9 670 aaKnown RBP21.29■■□□□ 1
SMPD3-201ENST00000219334 RPS8P62241 208 aaKnown RBP21.29■■□□□ 1
SMPD3-201ENST00000219334 TRPC3Q13507 836 aa21.29■■□□□ 1
SMPD3-201ENST00000219334 KIFAP3Q92845 792 aa21.29■■□□□ 1
SMPD3-201ENST00000219334 LUC7L2Q9Y383 392 aaKnown RBP21.29■■□□□ 1
SMPD3-201ENST00000219334 KRT5P13647 590 aa21.29■■□□□ 1
SMPD3-201ENST00000219334 PIK3AP1Q6ZUJ8 805 aa21.29■■□□□ 1
SMPD3-201ENST00000219334 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.29■■□□□ 1
SMPD3-201ENST00000219334 CSADQ9Y600 493 aa21.29■■□□□ 1
SMPD3-201ENST00000219334 RLBP1P12271 317 aa21.29■■□□□ 1
SMPD3-201ENST00000219334 CCDC186Q7Z3E2 898 aa21.29■■□□□ 1
SMPD3-201ENST00000219334 SPATA5Q8NB90 893 aa21.29■■□□□ 1
SMPD3-201ENST00000219334 DNAI1Q9UI46 699 aa21.29■■□□□ 1
SMPD3-201ENST00000219334 MAK16Q9BXY0 300 aaKnown RBP21.28■■□□□ 1
SMPD3-201ENST00000219334 CCNT1O60563 726 aaKnown RBP21.28■■□□□ 1
SMPD3-201ENST00000219334 ZNF496Q96IT1 587 aaPredicted RBP21.28■■□□□ 1
SMPD3-201ENST00000219334 CCDC14Q49A88 953 aa21.28■■□□□ 1
SMPD3-201ENST00000219334 MAPKAPK5Q8IW41 473 aa21.28■■□□□ 1
SMPD3-201ENST00000219334 CDAN1Q8IWY9 1227 aa21.28■■□□□ 1
SMPD3-201ENST00000219334 GCKRQ14397 625 aa21.28■■□□□ 1
SMPD3-201ENST00000219334 SMC5Q8IY18 1101 aa21.28■■□□□ 1
SMPD3-201ENST00000219334 INTS4Q96HW7 963 aaKnown RBP21.28■■□□□ 1
SMPD3-201ENST00000219334 M0QZ92 97 aa21.28■■□□□ 1
SMPD3-201ENST00000219334 ADCY7P51828 1080 aa21.28■■□□□ 1
SMPD3-201ENST00000219334 FAM107BQ9H098 131 aa21.28■■□□□ 1
SMPD3-201ENST00000219334 DNM2P50570 870 aa21.27■■□□□ 1
SMPD3-201ENST00000219334 CCDC63Q8NA47 563 aa21.27■■□□□ 1
SMPD3-201ENST00000219334 GOLGA1Q92805 767 aa21.27■■□□□ 1
SMPD3-201ENST00000219334 FAM169AQ9Y6X4 670 aa21.27■■□□□ 1
SMPD3-201ENST00000219334 PAIP2Q9BPZ3 127 aaKnown RBP21.27■■□□□ 1
SMPD3-201ENST00000219334 LZTS2Q9BRK4 669 aa21.27■■□□□ 1
SMPD3-201ENST00000219334 PEG3Q9GZU2 1588 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms