RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 FAM83AQ86UY5 434 aa27.47■■□□□ 1.99
VTI1B-201ENST00000216456 ZFPM1Q8IX07 1006 aa27.47■■□□□ 1.99
VTI1B-201ENST00000216456 BRI3BPQ8WY22 251 aa27.47■■□□□ 1.99
VTI1B-201ENST00000216456 XAGE2Q96GT9 111 aa27.47■■□□□ 1.99
VTI1B-201ENST00000216456 DENND2AQ9ULE3 1009 aa27.47■■□□□ 1.99
VTI1B-201ENST00000216456 SNCAIPQ9Y6H5 919 aa27.47■■□□□ 1.99
VTI1B-201ENST00000216456 ALDH1A1P00352 501 aa27.46■■□□□ 1.99
VTI1B-201ENST00000216456 CAP1Q01518 475 aa27.46■■□□□ 1.99
VTI1B-201ENST00000216456 NOM1Q5C9Z4 860 aaKnown RBP27.46■■□□□ 1.99
VTI1B-201ENST00000216456 WRNIP1Q96S55 665 aa27.46■■□□□ 1.99
VTI1B-201ENST00000216456 TESPA1A2RU30 521 aaPredicted RBP27.45■■□□□ 1.98
VTI1B-201ENST00000216456 GNAI2P04899 355 aa27.45■■□□□ 1.98
VTI1B-201ENST00000216456 FAM198AQ9UFP1 575 aa27.45■■□□□ 1.98
VTI1B-201ENST00000216456 LAMB1P07942 1786 aa27.45■■□□□ 1.98
VTI1B-201ENST00000216456 FKBP1CQ5VVH2 108 aa27.44■■□□□ 1.98
VTI1B-201ENST00000216456 PI16Q6UXB8 463 aa27.44■■□□□ 1.98
VTI1B-201ENST00000216456 C1orf115Q9H7X2 142 aa27.44■■□□□ 1.98
VTI1B-201ENST00000216456 USP40Q9NVE5 1235 aa27.44■■□□□ 1.98
VTI1B-201ENST00000216456 CSADQ9Y600 493 aa27.44■■□□□ 1.98
VTI1B-201ENST00000216456 SALL1Q9NSC2 1324 aa27.43■■□□□ 1.98
VTI1B-201ENST00000216456 INPP5BP32019 993 aa27.43■■□□□ 1.98
VTI1B-201ENST00000216456 ZKSCAN2Q63HK3 967 aa27.43■■□□□ 1.98
VTI1B-201ENST00000216456 NEUROD6Q96NK8 337 aa27.43■■□□□ 1.98
VTI1B-201ENST00000216456 ABCF2Q9UG63 623 aa27.43■■□□□ 1.98
VTI1B-201ENST00000216456 HTTP42858 3142 aa27.43■■□□□ 1.98
VTI1B-201ENST00000216456 CCL15-CCL14A0A0B4J2E2 113 aa27.42■■□□□ 1.98
VTI1B-201ENST00000216456 SEMA3EO15041 775 aa27.42■■□□□ 1.98
VTI1B-201ENST00000216456 TNRC18O15417 2968 aaPredicted RBP27.42■■□□□ 1.98
VTI1B-201ENST00000216456 SLURP2P0DP57 97 aa27.42■■□□□ 1.98
VTI1B-201ENST00000216456 RLBP1P12271 317 aa27.42■■□□□ 1.98
VTI1B-201ENST00000216456 CCL15Q16663 113 aa27.42■■□□□ 1.98
VTI1B-201ENST00000216456 FAM43AQ8N2R8 423 aa27.42■■□□□ 1.98
VTI1B-201ENST00000216456 FAM151AQ8WW52 585 aa27.42■■□□□ 1.98
VTI1B-201ENST00000216456 SPDYE5A6NIY4 337 aa27.41■■□□□ 1.98
VTI1B-201ENST00000216456 CD99L2Q8TCZ2 262 aa27.41■■□□□ 1.98
VTI1B-201ENST00000216456 RPAP1Q9BWH6 1393 aaPredicted RBP27.4■■□□□ 1.98
VTI1B-201ENST00000216456 ZNF384Q8TF68 577 aa27.4■■□□□ 1.98
VTI1B-201ENST00000216456 TRIM17Q9Y577 477 aa27.4■■□□□ 1.98
VTI1B-201ENST00000216456 PKN2Q16513 984 aaKnown RBP27.39■■□□□ 1.98
VTI1B-201ENST00000216456 FBXO46Q6PJ61 603 aaPredicted RBP27.39■■□□□ 1.98
VTI1B-201ENST00000216456 TBC1D9Q6ZT07 1266 aa27.39■■□□□ 1.98
VTI1B-201ENST00000216456 OTOP1Q7RTM1 612 aa27.39■■□□□ 1.98
VTI1B-201ENST00000216456 AKAP2Q9Y2D5 859 aa27.39■■□□□ 1.98
VTI1B-201ENST00000216456 IRF6O14896 467 aa27.38■■□□□ 1.97
VTI1B-201ENST00000216456 ZNF341Q9BYN7 854 aa27.38■■□□□ 1.97
VTI1B-201ENST00000216456 HMG20BQ9P0W2 317 aa27.38■■□□□ 1.97
VTI1B-201ENST00000216456 RGS3P49796 1198 aa27.37■■□□□ 1.97
VTI1B-201ENST00000216456 GTF2A2P52657 109 aa27.37■■□□□ 1.97
VTI1B-201ENST00000216456 OTUD7BQ6GQQ9 843 aa27.37■■□□□ 1.97
VTI1B-201ENST00000216456 ERO1BQ86YB8 467 aa27.37■■□□□ 1.97
VTI1B-201ENST00000216456 DZIP1Q86YF9 867 aaKnown RBP27.37■■□□□ 1.97
VTI1B-201ENST00000216456 GAKO14976 1311 aa27.37■■□□□ 1.97
VTI1B-201ENST00000216456 G3BP1Q13283 466 aaKnown RBP eCLIP27.36■■□□□ 1.97
VTI1B-201ENST00000216456 MVPQ14764 893 aaKnown RBP27.36■■□□□ 1.97
VTI1B-201ENST00000216456 DCAF15Q66K64 600 aa27.36■■□□□ 1.97
VTI1B-201ENST00000216456 SH3BP5LQ7L8J4 393 aa27.36■■□□□ 1.97
VTI1B-201ENST00000216456 DDX4Q9NQI0 724 aaKnown RBP27.36■■□□□ 1.97
VTI1B-201ENST00000216456 MYH2Q9UKX2 1941 aa27.35■■□□□ 1.97
VTI1B-201ENST00000216456 MECOMQ03112 1051 aa27.35■■□□□ 1.97
VTI1B-201ENST00000216456 POLA2Q14181 598 aa27.35■■□□□ 1.97
VTI1B-201ENST00000216456 TAF1CQ15572 869 aaPredicted RBP27.35■■□□□ 1.97
VTI1B-201ENST00000216456 BTBD19C9JJ37 291 aa27.34■■□□□ 1.97
VTI1B-201ENST00000216456 BTDP43251 543 aa27.34■■□□□ 1.97
VTI1B-201ENST00000216456 ZGPATQ8N5A5 531 aaKnown RBP27.34■■□□□ 1.97
VTI1B-201ENST00000216456 ZNF112Q9UJU3 913 aa27.34■■□□□ 1.97
VTI1B-201ENST00000216456 RFX7Q2KHR2 1363 aa27.34■■□□□ 1.97
VTI1B-201ENST00000216456 CENPFP49454 3210 aa27.33■■□□□ 1.97
VTI1B-201ENST00000216456 ZBTB22O15209 634 aa27.33■■□□□ 1.97
VTI1B-201ENST00000216456 WDHD1O75717 1129 aaPredicted RBP27.33■■□□□ 1.97
VTI1B-201ENST00000216456 MCAMP43121 646 aa27.33■■□□□ 1.97
VTI1B-201ENST00000216456 SP3Q02447 781 aa27.33■■□□□ 1.97
VTI1B-201ENST00000216456 PICALMQ13492 652 aa27.33■■□□□ 1.97
VTI1B-201ENST00000216456 GORABQ5T7V8 394 aa27.33■■□□□ 1.97
VTI1B-201ENST00000216456 ITPRIPQ8IWB1 547 aa27.33■■□□□ 1.97
VTI1B-201ENST00000216456 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.33■■□□□ 1.97
VTI1B-201ENST00000216456 HOOK2Q96ED9 719 aa27.33■■□□□ 1.97
VTI1B-201ENST00000216456 PDS5AQ29RF7 1337 aaKnown RBP27.33■■□□□ 1.97
VTI1B-201ENST00000216456 ATRNL1Q5VV63 1379 aa27.33■■□□□ 1.97
VTI1B-201ENST00000216456 AK9Q5TCS8 1911 aa27.32■■□□□ 1.96
VTI1B-201ENST00000216456 DDTLA6NHG4 134 aaPredicted RBP27.32■■□□□ 1.96
VTI1B-201ENST00000216456 ECM2O94769 699 aaPredicted RBP27.32■■□□□ 1.96
VTI1B-201ENST00000216456 PPIL2Q13356 520 aa27.32■■□□□ 1.96
VTI1B-201ENST00000216456 FTSJ3Q8IY81 847 aaKnown RBP27.32■■□□□ 1.96
VTI1B-201ENST00000216456 SPATA5Q8NB90 893 aa27.32■■□□□ 1.96
VTI1B-201ENST00000216456 SNRKQ9NRH2 765 aa27.32■■□□□ 1.96
VTI1B-201ENST00000216456 ATP8B2P98198 1209 aa27.31■■□□□ 1.96
VTI1B-201ENST00000216456 ERICH6Q7L0X2 663 aa27.31■■□□□ 1.96
VTI1B-201ENST00000216456 SSH3Q8TE77 659 aa27.31■■□□□ 1.96
VTI1B-201ENST00000216456 ERO1AQ96HE7 468 aa27.31■■□□□ 1.96
VTI1B-201ENST00000216456 IDI2Q9BXS1 227 aa27.31■■□□□ 1.96
VTI1B-201ENST00000216456 MROH7-TTC4A0A0A0MT08 1334 aa27.31■■□□□ 1.96
VTI1B-201ENST00000216456 ZBTB7BO15156 539 aaPredicted RBP27.3■■□□□ 1.96
VTI1B-201ENST00000216456 CETPP11597 493 aa27.3■■□□□ 1.96
VTI1B-201ENST00000216456 ARID4AP29374 1257 aaPredicted RBP27.3■■□□□ 1.96
VTI1B-201ENST00000216456 RHBDL3P58872 404 aa27.3■■□□□ 1.96
VTI1B-201ENST00000216456 SNAPC2Q13487 334 aa27.3■■□□□ 1.96
VTI1B-201ENST00000216456 PANK1Q8TE04 598 aa27.3■■□□□ 1.96
VTI1B-201ENST00000216456 FAM163AQ96GL9 167 aaPredicted RBP27.3■■□□□ 1.96
VTI1B-201ENST00000216456 DBNDD2Q9BQY9 259 aa27.3■■□□□ 1.96
VTI1B-201ENST00000216456 ZFYVE28Q9HCC9 887 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 196.6 ms