RNA–Protein interactions for RNA: ENST00000216297.6

SUPT16H-201, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT16H, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-201ENST00000216297 NUTM2AQ8IVF1 878 aaPredicted RBP9.91□□□□□ -0.82
SUPT16H-201ENST00000216297 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.91□□□□□ -0.82
SUPT16H-201ENST00000216297 UHRF1BP1LA0JNW5 1464 aa9.91□□□□□ -0.82
SUPT16H-201ENST00000216297 PPP1R12BO60237 982 aaPredicted RBP9.91□□□□□ -0.82
SUPT16H-201ENST00000216297 SKAP2O75563 359 aaPredicted RBP9.91□□□□□ -0.82
SUPT16H-201ENST00000216297 KIF4AO95239 1232 aa9.91□□□□□ -0.82
SUPT16H-201ENST00000216297 HPDP32754 393 aaPredicted RBP9.91□□□□□ -0.82
SUPT16H-201ENST00000216297 SF3A3Q12874 501 aaKnown RBP eCLIP9.91□□□□□ -0.823e-7■■□□□ 11.5
SUPT16H-201ENST00000216297 CCDC40Q4G0X9 1142 aa9.91□□□□□ -0.82
SUPT16H-201ENST00000216297 MSL1Q68DK7 614 aa9.91□□□□□ -0.82
SUPT16H-201ENST00000216297 KLC4Q9NSK0 619 aa9.91□□□□□ -0.82
SUPT16H-201ENST00000216297 NDUFB9Q9Y6M9 179 aa9.91□□□□□ -0.82
SUPT16H-201ENST00000216297 CDC42BPAQ5VT25 1732 aa9.91□□□□□ -0.82
SUPT16H-201ENST00000216297 RBM33Q96EV2 1170 aaKnown RBP9.91□□□□□ -0.82
SUPT16H-201ENST00000216297 GOLGA8BA8MQT2 603 aa9.9□□□□□ -0.82
SUPT16H-201ENST00000216297 BUB1BO60566 1050 aaPredicted RBP9.9□□□□□ -0.82
SUPT16H-201ENST00000216297 SF3B2Q13435 895 aaKnown RBP9.9□□□□□ -0.82
SUPT16H-201ENST00000216297 DHX32Q7L7V1 743 aaKnown RBP9.9□□□□□ -0.82
SUPT16H-201ENST00000216297 CEP120Q8N960 986 aa9.9□□□□□ -0.82
SUPT16H-201ENST00000216297 ENGASEQ8NFI3 743 aa9.9□□□□□ -0.82
SUPT16H-201ENST00000216297 MIEF2Q96C03 454 aa9.9□□□□□ -0.82
SUPT16H-201ENST00000216297 LLPHQ9BRT6 129 aaKnown RBP9.9□□□□□ -0.82
SUPT16H-201ENST00000216297 MYOM1P52179 1685 aa9.9□□□□□ -0.82
SUPT16H-201ENST00000216297 PBRM1Q86U86 1689 aa9.9□□□□□ -0.82
SUPT16H-201ENST00000216297 RNF17Q9BXT8 1623 aaKnown RBP9.9□□□□□ -0.82
SUPT16H-201ENST00000216297 E7EVH7 732 aa9.9□□□□□ -0.82
SUPT16H-201ENST00000216297 CCT6AP40227 531 aaKnown RBP9.9□□□□□ -0.82
SUPT16H-201ENST00000216297 NFXL1Q6ZNB6 911 aa9.9□□□□□ -0.82
SUPT16H-201ENST00000216297 LINC00301Q8NCQ3 95 aa9.9□□□□□ -0.82
SUPT16H-201ENST00000216297 NSUN7Q8NE18 718 aaKnown RBP9.9□□□□□ -0.82
SUPT16H-201ENST00000216297 PPANQ9NQ55 473 aaKnown RBP9.9□□□□□ -0.82
SUPT16H-201ENST00000216297 RIPOR2Q9Y4F9 1068 aa9.9□□□□□ -0.82
SUPT16H-201ENST00000216297 KIAA0232Q92628 1395 aa9.9□□□□□ -0.82
SUPT16H-201ENST00000216297 ARHGEF5Q12774 1597 aa9.9□□□□□ -0.83
SUPT16H-201ENST00000216297 A0A1W2PQ27 194 aa9.9□□□□□ -0.83
SUPT16H-201ENST00000216297 A0A1W2PQ64 194 aa9.9□□□□□ -0.83
SUPT16H-201ENST00000216297 A0A1W2PQD8 194 aa9.9□□□□□ -0.83
SUPT16H-201ENST00000216297 YEATS4O95619 227 aa9.9□□□□□ -0.83
SUPT16H-201ENST00000216297 CPP00450 1065 aa9.9□□□□□ -0.83
SUPT16H-201ENST00000216297 GCFC2P16383 781 aaKnown RBP9.9□□□□□ -0.83
SUPT16H-201ENST00000216297 ERCC3P19447 782 aa9.9□□□□□ -0.83
SUPT16H-201ENST00000216297 ZNF589Q86UQ0 364 aaPredicted RBP9.9□□□□□ -0.83
SUPT16H-201ENST00000216297 PCDHA5Q9Y5H7 936 aa9.9□□□□□ -0.83
SUPT16H-201ENST00000216297 MRPS25P82663 173 aaKnown RBP9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 EIF4A2Q14240 407 aaKnown RBP9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 SAFBQ15424 915 aaKnown RBP eCLIP9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 WASHC4Q2M389 1173 aa9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 CCDC122Q5T0U0 273 aa9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 DDX46Q7L014 1031 aaKnown RBP9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 BPIFA3Q9BQP9 254 aa9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 ZFYVE9O95405 1425 aa9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 PFKFB2O60825 505 aa9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 HAND2P61296 217 aa9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 COL9A3Q14050 684 aaPredicted RBP9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 ZKSCAN8Q15776 578 aaPredicted RBP9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 HSP90AB2PQ58FF8 381 aa9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 FAM43BQ6ZT52 329 aaPredicted RBP9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 RASSF8Q8NHQ8 419 aa9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 ZNHIT6Q9NWK9 470 aaKnown RBP9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 RTEL1Q9NZ71 1219 aa9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 RBL2Q08999 1139 aa9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 MYSM1Q5VVJ2 828 aa9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 CNGA4Q8IV77 575 aa9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 SAR1BQ9Y6B6 198 aa9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 AFMP43652 599 aa9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 PNMA8AQ86V59 439 aaPredicted RBP9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 COG1Q8WTW3 980 aa9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 NUP133Q8WUM0 1156 aa9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 SELENOOQ9BVL4 669 aa9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 IRAK4Q9NWZ3 460 aa9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 ADGRG1Q9Y653 693 aa9.89□□□□□ -0.83
SUPT16H-201ENST00000216297 UGGT1Q9NYU2 1555 aa9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 SRGAP2O75044 1071 aa9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 RBBP5Q15291 538 aaKnown RBP9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 CFAP58Q5T655 872 aa9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 ARMC2Q8NEN0 867 aa9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 IFT81Q8WYA0 676 aa9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 SPDL1Q96EA4 605 aa9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 HPCAL4Q9UM19 191 aa9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 MEFVO15553 781 aaPredicted RBP9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 CMA1P23946 247 aa9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 CASP14P31944 242 aa9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 IRX1P78414 480 aaPredicted RBP9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 TSGA10IPQ3SY00 556 aa9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 TMED8Q6PL24 325 aaPredicted RBP9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 MSANTD4Q8NCY6 345 aa9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 KIFC2Q96AC6 838 aa9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 AIDAQ96BJ3 306 aa9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 PSMB7Q99436 277 aa9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 SAMSN1Q9NSI8 373 aaKnown RBP9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 KCNH3Q9ULD8 1083 aa9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 LRRC7Q96NW7 1537 aa9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 KLF18A0A0U1RQI7 1052 aa9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 GOLGA8KD6RF30 607 aa9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 EIF3HO15372 352 aaKnown RBP eCLIP9.88□□□□□ -0.835e-6■■■□□ 14.9
SUPT16H-201ENST00000216297 GPTP24298 496 aa9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 MTHFSDQ2M296 383 aaKnown RBP9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 MEX3CQ5U5Q3 659 aaKnown RBP9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 SAMD1Q6SPF0 538 aaPredicted RBP9.88□□□□□ -0.83
SUPT16H-201ENST00000216297 CCDC50Q8IVM0 306 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms