RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 KARSQ15046 597 aaKnown RBP17.42■□□□□ 0.38
EFNB1-201ENST00000204961 ARMCX5Q6P1M9 558 aa17.42■□□□□ 0.38
EFNB1-201ENST00000204961 ZNF274Q96GC6 653 aaPredicted RBP17.42■□□□□ 0.38
EFNB1-201ENST00000204961 LLPHQ9BRT6 129 aaKnown RBP17.42■□□□□ 0.38
EFNB1-201ENST00000204961 FANCCQ00597 558 aa17.42■□□□□ 0.38
EFNB1-201ENST00000204961 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.42■□□□□ 0.38
EFNB1-201ENST00000204961 ZSWIM5Q9P217 1185 aa17.42■□□□□ 0.38
EFNB1-201ENST00000204961 MAPK8IP1Q9UQF2 711 aa17.42■□□□□ 0.38
EFNB1-201ENST00000204961 PDE6AP16499 860 aa17.42■□□□□ 0.38
EFNB1-201ENST00000204961 CCZ1BP86790 482 aa17.42■□□□□ 0.38
EFNB1-201ENST00000204961 CCZ1P86791 482 aaPredicted RBP17.42■□□□□ 0.38
EFNB1-201ENST00000204961 EVX2Q03828 476 aa17.42■□□□□ 0.38
EFNB1-201ENST00000204961 MB21D2Q8IYB1 491 aaPredicted RBP17.42■□□□□ 0.38
EFNB1-201ENST00000204961 TTLL11Q8NHH1 800 aa17.42■□□□□ 0.38
EFNB1-201ENST00000204961 ANGEL1Q9UNK9 670 aaKnown RBP17.42■□□□□ 0.38
EFNB1-201ENST00000204961 SMTNL1A8MU46 457 aa17.41■□□□□ 0.38
EFNB1-201ENST00000204961 ZBTB22O15209 634 aa17.41■□□□□ 0.38
EFNB1-201ENST00000204961 NBPF11Q86T75 865 aa17.41■□□□□ 0.38
EFNB1-201ENST00000204961 ZFP91Q96JP5 570 aaPredicted RBP17.41■□□□□ 0.38
EFNB1-201ENST00000204961 NBPF3Q9H094 633 aa17.41■□□□□ 0.38
EFNB1-201ENST00000204961 RAI14Q9P0K7 980 aa17.41■□□□□ 0.38
EFNB1-201ENST00000204961 SLC4A4Q9Y6R1 1079 aa17.41■□□□□ 0.38
EFNB1-201ENST00000204961 FER1L4A9Z1Z3 1794 aa17.41■□□□□ 0.38
EFNB1-201ENST00000204961 POLR2DO15514 142 aaKnown RBP17.41■□□□□ 0.38
EFNB1-201ENST00000204961 RANBP6O60518 1105 aaKnown RBP17.41■□□□□ 0.38
EFNB1-201ENST00000204961 CPLX2Q6PUV4 134 aaKnown RBP17.41■□□□□ 0.38
EFNB1-201ENST00000204961 OXER1Q8TDS5 423 aa17.41■□□□□ 0.38
EFNB1-201ENST00000204961 PCDHA5Q9Y5H7 936 aa17.41■□□□□ 0.38
EFNB1-201ENST00000204961 PCDH11XQ9BZA7 1347 aa17.4■□□□□ 0.38
EFNB1-201ENST00000204961 PCDH11YQ9BZA8 1340 aa17.4■□□□□ 0.38
EFNB1-201ENST00000204961 POLR3GO15318 223 aaPredicted RBP17.4■□□□□ 0.38
EFNB1-201ENST00000204961 CTAGE5O15320 804 aa17.4■□□□□ 0.38
EFNB1-201ENST00000204961 CDC25AP30304 524 aa17.4■□□□□ 0.38
EFNB1-201ENST00000204961 APOA5Q6Q788 366 aa17.4■□□□□ 0.38
EFNB1-201ENST00000204961 KIF18AQ8NI77 898 aa17.4■□□□□ 0.38
EFNB1-201ENST00000204961 CABP5Q9NP86 173 aa17.4■□□□□ 0.38
EFNB1-201ENST00000204961 STARD3NLO95772 234 aa17.4■□□□□ 0.38
EFNB1-201ENST00000204961 GTF2E1P29083 439 aaPredicted RBP17.4■□□□□ 0.38
EFNB1-201ENST00000204961 SHC4Q6S5L8 630 aa17.4■□□□□ 0.38
EFNB1-201ENST00000204961 CADPS2Q86UW7 1296 aa17.4■□□□□ 0.38
EFNB1-201ENST00000204961 PLIN2Q99541 437 aa17.4■□□□□ 0.38
EFNB1-201ENST00000204961 RTEL1Q9NZ71 1219 aa17.4■□□□□ 0.38
EFNB1-201ENST00000204961 DZIP3Q86Y13 1208 aaKnown RBP17.39■□□□□ 0.38
EFNB1-201ENST00000204961 NUTM2BA6NNL0 878 aaPredicted RBP17.39■□□□□ 0.37
EFNB1-201ENST00000204961 NUTM2EB1AL46 878 aaPredicted RBP17.39■□□□□ 0.37
EFNB1-201ENST00000204961 PRR29P0C7W0 189 aa17.39■□□□□ 0.37
EFNB1-201ENST00000204961 PDE4BQ07343 736 aa17.39■□□□□ 0.37
EFNB1-201ENST00000204961 BRINP3Q76B58 766 aa17.39■□□□□ 0.37
EFNB1-201ENST00000204961 NUTM2AQ8IVF1 878 aaPredicted RBP17.39■□□□□ 0.37
EFNB1-201ENST00000204961 KCNG4Q8TDN1 519 aa17.39■□□□□ 0.37
EFNB1-201ENST00000204961 BBXQ8WY36 941 aaPredicted RBP17.39■□□□□ 0.37
EFNB1-201ENST00000204961 IRX2Q9BZI1 471 aaPredicted RBP17.39■□□□□ 0.37
EFNB1-201ENST00000204961 TPM4P67936 248 aa17.39■□□□□ 0.37
EFNB1-201ENST00000204961 NOM1Q5C9Z4 860 aaKnown RBP17.39■□□□□ 0.37
EFNB1-201ENST00000204961 E4F1Q66K89 784 aaPredicted RBP17.39■□□□□ 0.37
EFNB1-201ENST00000204961 DHX58Q96C10 678 aa17.39■□□□□ 0.37
EFNB1-201ENST00000204961 MARF1Q9Y4F3 1742 aaKnown RBP17.38■□□□□ 0.37
EFNB1-201ENST00000204961 LCORLQ8N3X6 602 aa17.38■□□□□ 0.37
EFNB1-201ENST00000204961 VPS54Q9P1Q0 977 aa17.38■□□□□ 0.37
EFNB1-201ENST00000204961 GYG1P46976 350 aa17.38■□□□□ 0.37
EFNB1-201ENST00000204961 KMT5BQ4FZB7 885 aa17.38■□□□□ 0.37
EFNB1-201ENST00000204961 RBM43Q6ZSC3 357 aaKnown RBP17.38■□□□□ 0.37
EFNB1-201ENST00000204961 NLRP10Q86W26 655 aa17.38■□□□□ 0.37
EFNB1-201ENST00000204961 FOXP4Q8IVH2 680 aaPredicted RBP17.38■□□□□ 0.37
EFNB1-201ENST00000204961 DIS3L2Q8IYB7 885 aaKnown RBP17.38■□□□□ 0.37
EFNB1-201ENST00000204961 NCAPD2Q15021 1401 aa17.38■□□□□ 0.37
EFNB1-201ENST00000204961 VGLL3A8MV65 326 aa17.37■□□□□ 0.37
EFNB1-201ENST00000204961 FBXO38Q6PIJ6 1188 aa17.37■□□□□ 0.37
EFNB1-201ENST00000204961 OLFM4Q6UX06 510 aa17.37■□□□□ 0.37
EFNB1-201ENST00000204961 SERTAD1Q9UHV2 236 aa17.37■□□□□ 0.37
EFNB1-201ENST00000204961 PCDHB6Q9Y5E3 794 aa17.37■□□□□ 0.37
EFNB1-201ENST00000204961 RASGRF1Q13972 1273 aa17.37■□□□□ 0.37
EFNB1-201ENST00000204961 ATG3Q9NT62 314 aa17.37■□□□□ 0.37
EFNB1-201ENST00000204961 RNF216Q9NWF9 866 aaPredicted RBP17.37■□□□□ 0.37
EFNB1-201ENST00000204961 TOP1P11387 765 aaKnown RBP17.37■□□□□ 0.37
EFNB1-201ENST00000204961 PDE4CQ08493 712 aa17.37■□□□□ 0.37
EFNB1-201ENST00000204961 SKIDA1Q1XH10 827 aa17.37■□□□□ 0.37
EFNB1-201ENST00000204961 HINFPQ9BQA5 517 aa17.37■□□□□ 0.37
EFNB1-201ENST00000204961 KCNH3Q9ULD8 1083 aa17.37■□□□□ 0.37
EFNB1-201ENST00000204961 TACC3Q9Y6A5 838 aa17.37■□□□□ 0.37
EFNB1-201ENST00000204961 SEC31AO94979 1220 aaKnown RBP17.36■□□□□ 0.37
EFNB1-201ENST00000204961 TFRCP02786 760 aaKnown RBP17.36■□□□□ 0.37
EFNB1-201ENST00000204961 ERCC3P19447 782 aa17.36■□□□□ 0.37
EFNB1-201ENST00000204961 ADD2P35612 726 aa17.36■□□□□ 0.37
EFNB1-201ENST00000204961 SSRP1Q08945 709 aaKnown RBP17.36■□□□□ 0.37
EFNB1-201ENST00000204961 AXDND1Q5T1B0 1012 aaPredicted RBP17.36■□□□□ 0.37
EFNB1-201ENST00000204961 AEBP2Q6ZN18 517 aaPredicted RBP17.36■□□□□ 0.37
EFNB1-201ENST00000204961 MFSD6Q6ZSS7 791 aa17.36■□□□□ 0.37
EFNB1-201ENST00000204961 ZBTB38Q8NAP3 1195 aaPredicted RBP17.36■□□□□ 0.37
EFNB1-201ENST00000204961 MRFAP1L1Q96HT8 127 aa17.36■□□□□ 0.37
EFNB1-201ENST00000204961 LRRFIP1Q32MZ4 808 aaKnown RBP17.36■□□□□ 0.37
EFNB1-201ENST00000204961 IFNL3Q8IZI9 196 aa17.36■□□□□ 0.37
EFNB1-201ENST00000204961 PPP1R13BQ96KQ4 1090 aa17.36■□□□□ 0.37
EFNB1-201ENST00000204961 SLC4A9Q96Q91 983 aa17.36■□□□□ 0.37
EFNB1-201ENST00000204961 UIMC1Q96RL1 719 aa17.36■□□□□ 0.37
EFNB1-201ENST00000204961 ALDH8A1Q9H2A2 487 aaPredicted RBP17.36■□□□□ 0.37
EFNB1-201ENST00000204961 LZTFL1Q9NQ48 299 aa17.36■□□□□ 0.37
EFNB1-201ENST00000204961 KDM3BQ7LBC6 1761 aa17.36■□□□□ 0.37
EFNB1-201ENST00000204961 CTSWP56202 376 aa17.36■□□□□ 0.37
EFNB1-201ENST00000204961 SAMSN1Q9NSI8 373 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms