RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	CA1	P00915	261 aa	Predicted RBP	11.03	□□□□□ -0.64
PHGDH-231	ENST00000641939	RRAS2	P62070	204 aa	Predicted RBP	11.03	□□□□□ -0.64
PHGDH-231	ENST00000641939	DLK1	P80370	383 aa		11.03	□□□□□ -0.64
PHGDH-231	ENST00000641939	TRPT1	Q86TN4	253 aa	Known RBP	11.03	□□□□□ -0.64
PHGDH-231	ENST00000641939	OR10P1	Q8NGE3	313 aa		11.03	□□□□□ -0.64
PHGDH-231	ENST00000641939	GATAD1	Q8WUU5	269 aa		11.03	□□□□□ -0.64
PHGDH-231	ENST00000641939	SLC45A2	Q9UMX9	530 aa		11.03	□□□□□ -0.64
PHGDH-231	ENST00000641939		A0A0J9YWU9	116 aa		11.02	□□□□□ -0.65
PHGDH-231	ENST00000641939	KNCN	A6PVL3	124 aa		11.02	□□□□□ -0.65
PHGDH-231	ENST00000641939	FNDC10	F2Z333	226 aa		11.02	□□□□□ -0.65
PHGDH-231	ENST00000641939		L7N2F9	121 aa		11.02	□□□□□ -0.65
PHGDH-231	ENST00000641939	IL5	P05113	134 aa		11.02	□□□□□ -0.65
PHGDH-231	ENST00000641939	GATA2	P23769	480 aa	Predicted RBP	11.02	□□□□□ -0.65
PHGDH-231	ENST00000641939	VAMP2	P63027	116 aa		11.02	□□□□□ -0.65
PHGDH-231	ENST00000641939	IFITM3	Q01628	133 aa		11.02	□□□□□ -0.65
PHGDH-231	ENST00000641939	ACTL10	Q5JWF8	245 aa		11.02	□□□□□ -0.65
PHGDH-231	ENST00000641939	TMEM182	Q6ZP80	229 aa	Predicted RBP	11.02	□□□□□ -0.65
PHGDH-231	ENST00000641939	CYP2G1P	Q6ZSU1	146 aa		11.02	□□□□□ -0.65
PHGDH-231	ENST00000641939	OR8I2	Q8N0Y5	310 aa		11.02	□□□□□ -0.65
PHGDH-231	ENST00000641939	C2orf50	Q96LR7	162 aa		11.02	□□□□□ -0.65
PHGDH-231	ENST00000641939	NPVF	Q9HCQ7	196 aa		11.02	□□□□□ -0.65
PHGDH-231	ENST00000641939	LSM5	Q9Y4Y9	91 aa	Known RBP	11.02	□□□□□ -0.65
PHGDH-231	ENST00000641939		K7EPK0	472 aa		11.01	□□□□□ -0.65
PHGDH-231	ENST00000641939	ORM2	P19652	201 aa		11.01	□□□□□ -0.65
PHGDH-231	ENST00000641939	S100A7	P31151	101 aa		11.01	□□□□□ -0.65
PHGDH-231	ENST00000641939	GSG1L	Q6UXU4	331 aa		11.01	□□□□□ -0.65
PHGDH-231	ENST00000641939	TMEM147	Q9BVK8	224 aa		11.01	□□□□□ -0.65
PHGDH-231	ENST00000641939	MGAT4C	Q9UBM8	478 aa		11.01	□□□□□ -0.65
PHGDH-231	ENST00000641939	ZNF98	A6NK75	572 aa		11	□□□□□ -0.65
PHGDH-231	ENST00000641939	SPP1	P10451	314 aa		11	□□□□□ -0.65
PHGDH-231	ENST00000641939	SELENOT	P62341	195 aa		11	□□□□□ -0.65
PHGDH-231	ENST00000641939	TMEM41B	Q5BJD5	291 aa		11	□□□□□ -0.65
PHGDH-231	ENST00000641939	MORN3	Q6PF18	240 aa	Predicted RBP	11	□□□□□ -0.65
PHGDH-231	ENST00000641939	TEPP	Q6URK8	271 aa		11	□□□□□ -0.65
PHGDH-231	ENST00000641939	OR1B1	Q8NGR6	318 aa		11	□□□□□ -0.65
PHGDH-231	ENST00000641939	RARRES2	Q99969	163 aa		11	□□□□□ -0.65
PHGDH-231	ENST00000641939	GGACT	Q9BVM4	153 aa		11	□□□□□ -0.65
PHGDH-231	ENST00000641939	GPN1	Q9HCN4	374 aa	Predicted RBP	11	□□□□□ -0.65
PHGDH-231	ENST00000641939	SACS	Q9NZJ4	4579 aa		11	□□□□□ -0.65
PHGDH-231	ENST00000641939	DEDD	O75618	318 aa		10.99	□□□□□ -0.65
PHGDH-231	ENST00000641939	GIG44	P09565	113 aa	Predicted RBP	10.99	□□□□□ -0.65
PHGDH-231	ENST00000641939	PVALB	P20472	110 aa	Predicted RBP	10.99	□□□□□ -0.65
PHGDH-231	ENST00000641939	ID1	P41134	155 aa		10.99	□□□□□ -0.65
PHGDH-231	ENST00000641939	GALR1	P47211	349 aa		10.99	□□□□□ -0.65
PHGDH-231	ENST00000641939	BCAP31	P51572	246 aa		10.99	□□□□□ -0.65
PHGDH-231	ENST00000641939	ARL16	Q0P5N6	197 aa		10.99	□□□□□ -0.65
PHGDH-231	ENST00000641939	NRARP	Q7Z6K4	114 aa		10.99	□□□□□ -0.65
PHGDH-231	ENST00000641939	TMEM217	Q8N7C4	229 aa		10.99	□□□□□ -0.65
PHGDH-231	ENST00000641939	OR11H2	Q8NH07	326 aa		10.99	□□□□□ -0.65
PHGDH-231	ENST00000641939	SLC25A32	Q9H2D1	315 aa		10.99	□□□□□ -0.65
PHGDH-231	ENST00000641939	SLC25A22	Q9H936	323 aa		10.99	□□□□□ -0.65
PHGDH-231	ENST00000641939	LINC00869	P0C866	280 aa		10.98	□□□□□ -0.65
PHGDH-231	ENST00000641939	ATF4	P18848	351 aa	Predicted RBP	10.98	□□□□□ -0.65
PHGDH-231	ENST00000641939	PSMB3	P49720	205 aa		10.98	□□□□□ -0.65
PHGDH-231	ENST00000641939	CAV2	P51636	162 aa		10.98	□□□□□ -0.65
PHGDH-231	ENST00000641939	PLP1	P60201	277 aa		10.98	□□□□□ -0.65
PHGDH-231	ENST00000641939	S100A10	P60903	97 aa		10.98	□□□□□ -0.65
PHGDH-231	ENST00000641939	EWSR1	Q01844	656 aa	Known RBP eCLIP	10.98	□□□□□ -0.65
PHGDH-231	ENST00000641939	IL15RA	Q13261	267 aa		10.98	□□□□□ -0.65
PHGDH-231	ENST00000641939	SAMD13	Q5VXD3	122 aa		10.98	□□□□□ -0.65
PHGDH-231	ENST00000641939	C11orf1	Q9H5F2	150 aa		10.98	□□□□□ -0.65
PHGDH-231	ENST00000641939	DOK5	Q9P104	306 aa		10.98	□□□□□ -0.65
PHGDH-231	ENST00000641939	PLEC	Q15149	4684 aa	Known RBP	10.97	□□□□□ -0.65
PHGDH-231	ENST00000641939		H3BMM0	161 aa		10.97	□□□□□ -0.65
PHGDH-231	ENST00000641939	SOCS3	O14543	225 aa		10.97	□□□□□ -0.65
PHGDH-231	ENST00000641939	PRAF2	O60831	178 aa		10.97	□□□□□ -0.65
PHGDH-231	ENST00000641939	HYPM	O75409	117 aa		10.97	□□□□□ -0.65
PHGDH-231	ENST00000641939	HLA-DRB4	P13762	266 aa		10.97	□□□□□ -0.65
PHGDH-231	ENST00000641939	C4BPB	P20851	252 aa		10.97	□□□□□ -0.65
PHGDH-231	ENST00000641939	MEOX2	P50222	304 aa		10.97	□□□□□ -0.65
PHGDH-231	ENST00000641939	DEFA1	P59665	94 aa		10.97	□□□□□ -0.65
PHGDH-231	ENST00000641939	DEFA3	P59666	94 aa		10.97	□□□□□ -0.65
PHGDH-231	ENST00000641939	RAP2B	P61225	183 aa		10.97	□□□□□ -0.65
PHGDH-231	ENST00000641939	SLC38A11	Q08AI6	406 aa		10.97	□□□□□ -0.65
PHGDH-231	ENST00000641939	RAB32	Q13637	225 aa		10.97	□□□□□ -0.65
PHGDH-231	ENST00000641939	LINC00052	Q96N35	136 aa		10.97	□□□□□ -0.65
PHGDH-231	ENST00000641939	GPR82	Q96P67	336 aa		10.97	□□□□□ -0.65
PHGDH-231	ENST00000641939	RSG1	Q9BU20	258 aa		10.97	□□□□□ -0.65
PHGDH-231	ENST00000641939	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	10.97	□□□□□ -0.65
PHGDH-231	ENST00000641939	HIGD1A	Q9Y241	93 aa		10.97	□□□□□ -0.65
PHGDH-231	ENST00000641939	HLA-DRB4	X5D2U9	266 aa		10.97	□□□□□ -0.65
PHGDH-231	ENST00000641939	FAM24A	A6NFZ4	105 aa		10.96	□□□□□ -0.65
PHGDH-231	ENST00000641939	INMT-MINDY4	F8WBC2	141 aa		10.96	□□□□□ -0.65
PHGDH-231	ENST00000641939		H3BRN7	92 aa		10.96	□□□□□ -0.65
PHGDH-231	ENST00000641939	ISLR	O14498	428 aa		10.96	□□□□□ -0.65
PHGDH-231	ENST00000641939	NUTF2	P61970	127 aa	Known RBP	10.96	□□□□□ -0.65
PHGDH-231	ENST00000641939	S100A7A	Q86SG5	101 aa		10.96	□□□□□ -0.65
PHGDH-231	ENST00000641939	C16orf92	Q96LL3	132 aa		10.96	□□□□□ -0.65
PHGDH-231	ENST00000641939	SHANK2-AS3	Q9BTD1	123 aa		10.96	□□□□□ -0.65
PHGDH-231	ENST00000641939	SCRT1	Q9BWW7	348 aa		10.96	□□□□□ -0.65
PHGDH-231	ENST00000641939	LYRM2	Q9NU23	88 aa	Predicted RBP	10.96	□□□□□ -0.65
PHGDH-231	ENST00000641939	GOSR2	O14653	212 aa		10.95	□□□□□ -0.66
PHGDH-231	ENST00000641939	AGPAT2	O15120	278 aa		10.95	□□□□□ -0.66
PHGDH-231	ENST00000641939	CST7	O76096	145 aa		10.95	□□□□□ -0.66
PHGDH-231	ENST00000641939	OR5G3	P0C626	314 aa		10.95	□□□□□ -0.66
PHGDH-231	ENST00000641939	PMS2P11	Q13670	270 aa		10.95	□□□□□ -0.66
PHGDH-231	ENST00000641939	PXDC1	Q5TGL8	231 aa		10.95	□□□□□ -0.66
PHGDH-231	ENST00000641939	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		10.95	□□□□□ -0.66
PHGDH-231	ENST00000641939	FOXI2	Q6ZQN5	318 aa		10.95	□□□□□ -0.66
PHGDH-231	ENST00000641939	ZNF546	Q86UE3	836 aa		10.95	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms