RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 ELOA3CA0A087WX78 387 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-230ENST00000641927 MYCNOSP40205 109 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 RIPPLY3P57055 190 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 PLP1P60201 277 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 KLF5Q13887 457 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-230ENST00000641927 TMEM41BQ5BJD5 291 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 SHISA2Q6UWI4 295 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 OR4F17Q8NGA8 305 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 TMEM37Q8WXS4 190 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 DLX4Q92988 240 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-230ENST00000641927 OR4F4Q96R69 305 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 METTL26Q96S19 204 aa13.37□□□□□ -0.27
PHGDH-230ENST00000641927 UMAD1C9J7I0 102 aa13.36□□□□□ -0.27
PHGDH-230ENST00000641927 NPPCP23582 126 aa13.36□□□□□ -0.27
PHGDH-230ENST00000641927 TM4SF20Q53R12 229 aa13.36□□□□□ -0.27
PHGDH-230ENST00000641927 FAM78BQ5VT40 261 aa13.36□□□□□ -0.27
PHGDH-230ENST00000641927 FAM122CQ6P4D5 195 aa13.36□□□□□ -0.27
PHGDH-230ENST00000641927 PATE2Q6UY27 113 aa13.36□□□□□ -0.27
PHGDH-230ENST00000641927 LINC00305Q7Z4B0 112 aa13.36□□□□□ -0.27
PHGDH-230ENST00000641927 MDFIQ99750 246 aa13.36□□□□□ -0.27
PHGDH-230ENST00000641927 DAZ1Q9NQZ3 744 aaKnown RBP13.36□□□□□ -0.27
PHGDH-230ENST00000641927 RPRMQ9NS64 109 aa13.36□□□□□ -0.27
PHGDH-230ENST00000641927 PLA2G2EQ9NZK7 142 aa13.36□□□□□ -0.27
PHGDH-230ENST00000641927 UFC1Q9Y3C8 167 aa13.36□□□□□ -0.27
PHGDH-230ENST00000641927 IGHV3-49A0A0A0MS15 119 aa13.35□□□□□ -0.27
PHGDH-230ENST00000641927 A0A1W2PPV4 95 aa13.35□□□□□ -0.27
PHGDH-230ENST00000641927 GATAD1Q8WUU5 269 aa13.35□□□□□ -0.27
PHGDH-230ENST00000641927 UBQLN2Q9UHD9 624 aa13.35□□□□□ -0.27
PHGDH-230ENST00000641927 IGHV3OR16-13A0A075B7E8 117 aa13.34□□□□□ -0.27
PHGDH-230ENST00000641927 IGHV3-74A0A0B4J1X5 117 aa13.34□□□□□ -0.27
PHGDH-230ENST00000641927 LGALS9O00182 355 aa13.34□□□□□ -0.27
PHGDH-230ENST00000641927 FHITP49789 147 aa13.34□□□□□ -0.27
PHGDH-230ENST00000641927 REC114Q7Z4M0 266 aa13.34□□□□□ -0.27
PHGDH-230ENST00000641927 S100A7AQ86SG5 101 aa13.34□□□□□ -0.27
PHGDH-230ENST00000641927 FAM213BQ8TBF2 198 aa13.34□□□□□ -0.27
PHGDH-230ENST00000641927 SEPSECSQ9HD40 501 aaKnown RBP13.34□□□□□ -0.27
PHGDH-230ENST00000641927 MRPL27Q9P0M9 148 aaKnown RBP13.34□□□□□ -0.27
PHGDH-230ENST00000641927 IGHV3-66A0A0C4DH42 116 aa13.34□□□□□ -0.27
PHGDH-230ENST00000641927 EIF3GO75821 320 aaKnown RBP eCLIP13.34□□□□□ -0.27
PHGDH-230ENST00000641927 RHOBP62745 196 aa13.34□□□□□ -0.27
PHGDH-230ENST00000641927 RPP25LQ8N5L8 163 aaKnown RBP13.34□□□□□ -0.27
PHGDH-230ENST00000641927 NARS2Q96I59 477 aaKnown RBP13.34□□□□□ -0.27
PHGDH-230ENST00000641927 SLC25A39Q9BZJ4 359 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-230ENST00000641927 SLC25A22Q9H936 323 aa13.34□□□□□ -0.27
PHGDH-230ENST00000641927 PEMTQ9UBM1 199 aa13.34□□□□□ -0.27
PHGDH-230ENST00000641927 COL6A5A8TX70 2615 aa13.33□□□□□ -0.28
PHGDH-230ENST00000641927 S100A7P31151 101 aa13.33□□□□□ -0.28
PHGDH-230ENST00000641927 SULT1A2P50226 295 aa13.33□□□□□ -0.28
PHGDH-230ENST00000641927 SPATA31B1PQ5VZV4 182 aa13.33□□□□□ -0.28
PHGDH-230ENST00000641927 LEMD1Q68G75 181 aa13.33□□□□□ -0.28
PHGDH-230ENST00000641927 MIR17HGQ75NE6 70 aa13.33□□□□□ -0.28
PHGDH-230ENST00000641927 OR9G4Q8NGQ1 327 aa13.33□□□□□ -0.28
PHGDH-230ENST00000641927 RNF141Q8WVD5 230 aa13.33□□□□□ -0.28
PHGDH-230ENST00000641927 SCRT1Q9BWW7 348 aa13.33□□□□□ -0.28
PHGDH-230ENST00000641927 ACTR3CQ9C0K3 210 aaPredicted RBP13.33□□□□□ -0.28
PHGDH-230ENST00000641927 PFDN2Q9UHV9 154 aa13.33□□□□□ -0.28
PHGDH-230ENST00000641927 A8MWP6 167 aa13.32□□□□□ -0.28
PHGDH-230ENST00000641927 K7EMT4 169 aa13.32□□□□□ -0.28
PHGDH-230ENST00000641927 OVOL1O14753 267 aa13.32□□□□□ -0.28
PHGDH-230ENST00000641927 HMGB3O15347 200 aaKnown RBP13.32□□□□□ -0.28
PHGDH-230ENST00000641927 APOHP02749 345 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-230ENST00000641927 EDN2P20800 178 aa13.32□□□□□ -0.28
PHGDH-230ENST00000641927 CRYBB3P26998 211 aa13.32□□□□□ -0.28
PHGDH-230ENST00000641927 CDC34P49427 236 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-230ENST00000641927 RAB5CP51148 216 aa13.32□□□□□ -0.28
PHGDH-230ENST00000641927 RNF2Q99496 336 aa13.32□□□□□ -0.28
PHGDH-230ENST00000641927 FUT9Q9Y231 359 aa13.32□□□□□ -0.28
PHGDH-230ENST00000641927 TRAV5A0A0B4J249 113 aa13.31□□□□□ -0.28
PHGDH-230ENST00000641927 TMEM213A2RRL7 107 aa13.31□□□□□ -0.28
PHGDH-230ENST00000641927 ZNF705EA8MWA4 302 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-230ENST00000641927 MORN5Q5VZ52 161 aa13.31□□□□□ -0.28
PHGDH-230ENST00000641927 SHANK2-AS3Q9BTD1 123 aa13.31□□□□□ -0.28
PHGDH-230ENST00000641927 MRPL32Q9BYC8 188 aaKnown RBP13.31□□□□□ -0.28
PHGDH-230ENST00000641927 IGHV7-4-1A0A0J9YVY3 117 aa13.31□□□□□ -0.28
PHGDH-230ENST00000641927 ZNF98A6NK75 572 aa13.31□□□□□ -0.28
PHGDH-230ENST00000641927 H3BRN7 92 aa13.31□□□□□ -0.28
PHGDH-230ENST00000641927 M0QZ24 198 aa13.31□□□□□ -0.28
PHGDH-230ENST00000641927 ATP6V1G1O75348 118 aa13.31□□□□□ -0.28
PHGDH-230ENST00000641927 DPPA3Q6W0C5 159 aa13.31□□□□□ -0.28
PHGDH-230ENST00000641927 RAB24Q969Q5 203 aa13.31□□□□□ -0.28
PHGDH-230ENST00000641927 C2orf70A6NJV1 201 aa13.3□□□□□ -0.28
PHGDH-230ENST00000641927 RHPN1-AS1Q9BWJ2 59 aa13.3□□□□□ -0.28
PHGDH-230ENST00000641927 SELENOKQ9Y6D0 94 aa13.3□□□□□ -0.28
PHGDH-230ENST00000641927 WNK1Q9H4A3 2382 aa13.3□□□□□ -0.28
PHGDH-230ENST00000641927 A0A1W2PS18 150 aa13.29□□□□□ -0.28
PHGDH-230ENST00000641927 SEC14L6B5MCN3 397 aa13.29□□□□□ -0.28
PHGDH-230ENST00000641927 FOLR2P14207 255 aa13.29□□□□□ -0.28
PHGDH-230ENST00000641927 CBLN1P23435 193 aa13.29□□□□□ -0.28
PHGDH-230ENST00000641927 TAS2R45P59539 299 aa13.29□□□□□ -0.28
PHGDH-230ENST00000641927 ZNF726P1Q15940 193 aa13.29□□□□□ -0.28
PHGDH-230ENST00000641927 NDUFA5Q16718 116 aa13.29□□□□□ -0.28
PHGDH-230ENST00000641927 LCN15Q6UWW0 184 aa13.29□□□□□ -0.28
PHGDH-230ENST00000641927 SSX7Q7RTT5 188 aa13.29□□□□□ -0.28
PHGDH-230ENST00000641927 OR8I2Q8N0Y5 310 aa13.29□□□□□ -0.28
PHGDH-230ENST00000641927 LINC00482Q8N8I6 264 aa13.29□□□□□ -0.28
PHGDH-230ENST00000641927 GRAMD2BQ96HH9 432 aa13.29□□□□□ -0.28
PHGDH-230ENST00000641927 ELOVL1Q9BW60 279 aa13.29□□□□□ -0.28
PHGDH-230ENST00000641927 TECRQ9NZ01 308 aaKnown RBP13.29□□□□□ -0.28
PHGDH-230ENST00000641927 SMPXQ9UHP9 88 aa13.29□□□□□ -0.28
PHGDH-230ENST00000641927 STAB1Q9NY15 2570 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms