RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 PGPA6NDG6 321 aa9.67□□□□□ -0.86
RBFOX1-224ENST00000641259 GNG3P63215 75 aa9.67□□□□□ -0.86
RBFOX1-224ENST00000641259 GATA3P23771 443 aa9.67□□□□□ -0.86
RBFOX1-224ENST00000641259 INSL3P51460 131 aa9.67□□□□□ -0.86
RBFOX1-224ENST00000641259 MRPL27Q9P0M9 148 aaKnown RBP9.67□□□□□ -0.86
RBFOX1-224ENST00000641259 FAM215AQ9Y5M1 114 aa9.67□□□□□ -0.86
RBFOX1-224ENST00000641259 TRAV9-1A0A075B6T8 112 aa9.66□□□□□ -0.86
RBFOX1-224ENST00000641259 TRGV10A0A0A0MS01 117 aa9.66□□□□□ -0.86
RBFOX1-224ENST00000641259 WNT9BO14905 357 aa9.66□□□□□ -0.86
RBFOX1-224ENST00000641259 AGFG2O95081 481 aa9.66□□□□□ -0.86
RBFOX1-224ENST00000641259 SCGB1C2P0DMR2 95 aa9.66□□□□□ -0.86
RBFOX1-224ENST00000641259 RPL39P5Q59GN2 51 aa9.66□□□□□ -0.86
RBFOX1-224ENST00000641259 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.66□□□□□ -0.86
RBFOX1-224ENST00000641259 H7C2G1 150 aa9.66□□□□□ -0.86
RBFOX1-224ENST00000641259 PRNTQ86SH4 94 aa9.66□□□□□ -0.86
RBFOX1-224ENST00000641259 DPF1Q92782 380 aa9.66□□□□□ -0.86
RBFOX1-224ENST00000641259 RNF183Q96D59 192 aa9.66□□□□□ -0.86
RBFOX1-224ENST00000641259 C20orf78Q9BR46 151 aa9.66□□□□□ -0.86
RBFOX1-224ENST00000641259 NBASA2RRP1 2371 aa9.66□□□□□ -0.86
RBFOX1-224ENST00000641259 ACACAQ13085 2346 aa9.66□□□□□ -0.86
RBFOX1-224ENST00000641259 SHISA2Q6UWI4 295 aa9.66□□□□□ -0.86
RBFOX1-224ENST00000641259 PET117Q6UWS5 81 aa9.66□□□□□ -0.86
RBFOX1-224ENST00000641259 Q6ZR03 302 aa9.66□□□□□ -0.86
RBFOX1-224ENST00000641259 Q6ZT83 130 aa9.66□□□□□ -0.86
RBFOX1-224ENST00000641259 ZNF479Q96JC4 524 aa9.66□□□□□ -0.86
RBFOX1-224ENST00000641259 HIST1H4GQ99525 98 aa9.66□□□□□ -0.86
RBFOX1-224ENST00000641259 OPRK1P41145 380 aa9.65□□□□□ -0.86
RBFOX1-224ENST00000641259 C3orf36Q3SXR2 165 aa9.65□□□□□ -0.86
RBFOX1-224ENST00000641259 DEFB108BQ8NET1 73 aa9.65□□□□□ -0.86
RBFOX1-224ENST00000641259 OR9G1Q8NH87 305 aa9.65□□□□□ -0.86
RBFOX1-224ENST00000641259 MRAP2Q96G30 205 aa9.65□□□□□ -0.86
RBFOX1-224ENST00000641259 ZNF71Q9NQZ8 489 aaPredicted RBP9.65□□□□□ -0.86
RBFOX1-224ENST00000641259 hADV38S2A0JD32 116 aa9.65□□□□□ -0.86
RBFOX1-224ENST00000641259 GGTLC3B5MD39 225 aa9.65□□□□□ -0.86
RBFOX1-224ENST00000641259 FAM90A26D6RGX4 464 aa9.65□□□□□ -0.86
RBFOX1-224ENST00000641259 H3BRM9 83 aa9.65□□□□□ -0.86
RBFOX1-224ENST00000641259 GDF5OSQ5U4N7 250 aa9.65□□□□□ -0.86
RBFOX1-224ENST00000641259 Q8NA96 180 aa9.65□□□□□ -0.86
RBFOX1-224ENST00000641259 ZNF414Q96IQ9 312 aa9.65□□□□□ -0.86
RBFOX1-224ENST00000641259 TXNDC17Q9BRA2 123 aa9.65□□□□□ -0.86
RBFOX1-224ENST00000641259 TRAV8-1A0A0A6YYK1 113 aa9.64□□□□□ -0.87
RBFOX1-224ENST00000641259 NCR2O95944 276 aa9.64□□□□□ -0.87
RBFOX1-224ENST00000641259 SRSF12Q8WXF0 261 aaKnown RBP9.64□□□□□ -0.87
RBFOX1-224ENST00000641259 ZNF391Q9UJN7 358 aa9.64□□□□□ -0.87
RBFOX1-224ENST00000641259 TCF19Q9Y242 345 aa9.64□□□□□ -0.87
RBFOX1-224ENST00000641259 GAGE13Q4V321 117 aa9.64□□□□□ -0.87
RBFOX1-224ENST00000641259 PAXXQ9BUH6 204 aa9.64□□□□□ -0.87
RBFOX1-224ENST00000641259 PCNX1Q96RV3 2341 aa9.64□□□□□ -0.87
RBFOX1-224ENST00000641259 LINC00473A8K010 186 aa9.64□□□□□ -0.87
RBFOX1-224ENST00000641259 C12orf77C9JDV5 145 aa9.64□□□□□ -0.87
RBFOX1-224ENST00000641259 COX8AP10176 69 aa9.64□□□□□ -0.87
RBFOX1-224ENST00000641259 WDR31Q8NA23 367 aa9.64□□□□□ -0.87
RBFOX1-224ENST00000641259 SCRT2Q9NQ03 307 aa9.64□□□□□ -0.87
RBFOX1-224ENST00000641259 TMEM160Q9NX00 188 aa9.64□□□□□ -0.87
RBFOX1-224ENST00000641259 CREBBPQ92793 2442 aa9.63□□□□□ -0.87
RBFOX1-224ENST00000641259 PRR30Q53SZ7 412 aaPredicted RBP9.63□□□□□ -0.87
RBFOX1-224ENST00000641259 ZNF645Q8N7E2 425 aa9.63□□□□□ -0.87
RBFOX1-224ENST00000641259 GLMPQ8WWB7 406 aa9.63□□□□□ -0.87
RBFOX1-224ENST00000641259 RND1Q92730 232 aa9.63□□□□□ -0.87
RBFOX1-224ENST00000641259 TMEM30CPA0ZSE6 113 aa9.63□□□□□ -0.87
RBFOX1-224ENST00000641259 PSMB11A5LHX3 300 aa9.63□□□□□ -0.87
RBFOX1-224ENST00000641259 PSMB2P49721 201 aa9.63□□□□□ -0.87
RBFOX1-224ENST00000641259 GTSCR1Q86UQ5 136 aa9.63□□□□□ -0.87
RBFOX1-224ENST00000641259 ASCL4Q6XD76 172 aa9.63□□□□□ -0.87
RBFOX1-224ENST00000641259 PDPNQ86YL7 162 aa9.63□□□□□ -0.87
RBFOX1-224ENST00000641259 MBD3L4A6NDZ8 208 aaPredicted RBP9.62□□□□□ -0.87
RBFOX1-224ENST00000641259 MBD3L3A6NE82 208 aaPredicted RBP9.62□□□□□ -0.87
RBFOX1-224ENST00000641259 MBD3L5A6NJ08 208 aaPredicted RBP9.62□□□□□ -0.87
RBFOX1-224ENST00000641259 PRTN3P24158 256 aa9.62□□□□□ -0.87
RBFOX1-224ENST00000641259 SP5Q6BEB4 398 aaPredicted RBP9.62□□□□□ -0.87
RBFOX1-224ENST00000641259 MBD3L2Q8NHZ7 208 aaPredicted RBP9.62□□□□□ -0.87
RBFOX1-224ENST00000641259 LRRC29Q8WV35 223 aa9.62□□□□□ -0.87
RBFOX1-224ENST00000641259 GRAMD2BQ96HH9 432 aa9.62□□□□□ -0.87
RBFOX1-224ENST00000641259 POLDIP2Q9Y2S7 368 aa9.62□□□□□ -0.87
RBFOX1-224ENST00000641259 C9JCJ5 164 aa9.62□□□□□ -0.87
RBFOX1-224ENST00000641259 K7ENP7 123 aa9.62□□□□□ -0.87
RBFOX1-224ENST00000641259 MPDU1O75352 247 aa9.62□□□□□ -0.87
RBFOX1-224ENST00000641259 FXYD2P54710 66 aa9.62□□□□□ -0.87
RBFOX1-224ENST00000641259 ZNF718Q3SXZ3 478 aa9.62□□□□□ -0.87
RBFOX1-224ENST00000641259 INO80CQ6PI98 192 aaPredicted RBP9.62□□□□□ -0.87
RBFOX1-224ENST00000641259 SPAG8Q99932 426 aaPredicted RBP9.62□□□□□ -0.87
RBFOX1-224ENST00000641259 KLK15Q9H2R5 256 aa9.62□□□□□ -0.87
RBFOX1-224ENST00000641259 MSRB2Q9Y3D2 182 aa9.62□□□□□ -0.87
RBFOX1-224ENST00000641259 C8orf88P0DMB2 117 aa9.61□□□□□ -0.87
RBFOX1-224ENST00000641259 FAM222BQ8WU58 562 aa9.61□□□□□ -0.87
RBFOX1-224ENST00000641259 SAA2-SAA4A0A096LPE2 208 aa9.61□□□□□ -0.87
RBFOX1-224ENST00000641259 SMKR1H3BMG3 65 aa9.61□□□□□ -0.87
RBFOX1-224ENST00000641259 PEX7O00628 323 aa9.61□□□□□ -0.87
RBFOX1-224ENST00000641259 RPS20P60866 119 aaKnown RBP9.61□□□□□ -0.87
RBFOX1-224ENST00000641259 TTC32Q5I0X7 151 aa9.61□□□□□ -0.87
RBFOX1-224ENST00000641259 ZNF474Q6S9Z5 364 aaPredicted RBP9.61□□□□□ -0.87
RBFOX1-224ENST00000641259 H1FXQ92522 213 aaKnown RBP9.61□□□□□ -0.87
RBFOX1-224ENST00000641259 PTPRQQ9UMZ3 2332 aa9.61□□□□□ -0.87
RBFOX1-224ENST00000641259 MOSP00540 346 aa9.61□□□□□ -0.87
RBFOX1-224ENST00000641259 REG1AP05451 166 aa9.61□□□□□ -0.87
RBFOX1-224ENST00000641259 IFI27P40305 119 aaPredicted RBP9.61□□□□□ -0.87
RBFOX1-224ENST00000641259 C22orf34Q6ZV56 151 aa9.61□□□□□ -0.87
RBFOX1-224ENST00000641259 WDR86Q86TI4 376 aa9.61□□□□□ -0.87
RBFOX1-224ENST00000641259 VGLL1Q99990 258 aa9.61□□□□□ -0.87
RBFOX1-224ENST00000641259 RTL8AQ9BWD3 113 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms