RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 MED6O75586 246 aa10.02□□□□□ -0.81
LINC00339-211ENST00000641009 C1orf194Q5T5A4 169 aa10.02□□□□□ -0.81
LINC00339-211ENST00000641009 CCDC190Q86UF4 302 aa10.02□□□□□ -0.81
LINC00339-211ENST00000641009 CENPSQ8N2Z9 138 aa10.02□□□□□ -0.81
LINC00339-211ENST00000641009 THAP8Q8NA92 274 aa10.02□□□□□ -0.81
LINC00339-211ENST00000641009 SAV1Q9H4B6 383 aaPredicted RBP10.02□□□□□ -0.81
LINC00339-211ENST00000641009 DNAH2Q9P225 4427 aa10.02□□□□□ -0.81
LINC00339-211ENST00000641009 IGHV4-4A0A075B6R2 117 aa10.01□□□□□ -0.81
LINC00339-211ENST00000641009 PRSS46E5RG02 174 aa10.01□□□□□ -0.81
LINC00339-211ENST00000641009 ID1P41134 155 aa10.01□□□□□ -0.81
LINC00339-211ENST00000641009 PSMB3P49720 205 aa10.01□□□□□ -0.81
LINC00339-211ENST00000641009 C12orf74Q32Q52 190 aa10.01□□□□□ -0.81
LINC00339-211ENST00000641009 GGNBP1Q5YKI7 109 aa10.01□□□□□ -0.81
LINC00339-211ENST00000641009 OR8I2Q8N0Y5 310 aa10.01□□□□□ -0.81
LINC00339-211ENST00000641009 COQ8AQ8NI60 647 aa10.01□□□□□ -0.81
LINC00339-211ENST00000641009 DEDD2Q8WXF8 326 aa10.01□□□□□ -0.81
LINC00339-211ENST00000641009 CIB3Q96Q77 187 aaPredicted RBP10.01□□□□□ -0.81
LINC00339-211ENST00000641009 F6UB75 175 aa10□□□□□ -0.81
LINC00339-211ENST00000641009 H3BP45 60 aa10□□□□□ -0.81
LINC00339-211ENST00000641009 GATA2P23769 480 aaPredicted RBP10□□□□□ -0.81
LINC00339-211ENST00000641009 SPANXN5Q5MJ07 72 aa10□□□□□ -0.81
LINC00339-211ENST00000641009 ZNF705AQ6ZN79 300 aaPredicted RBP10□□□□□ -0.81
LINC00339-211ENST00000641009 FOXI2Q6ZQN5 318 aa10□□□□□ -0.81
LINC00339-211ENST00000641009 OR4B1Q8NGF8 309 aa10□□□□□ -0.81
LINC00339-211ENST00000641009 RBM38Q9H0Z9 239 aaKnown RBP10□□□□□ -0.81
LINC00339-211ENST00000641009 IGHV3OR16-12A0A075B7B8 117 aa9.99□□□□□ -0.81
LINC00339-211ENST00000641009 DEFB131BA0A096LNP1 70 aa9.99□□□□□ -0.81
LINC00339-211ENST00000641009 RPP30P78346 268 aaKnown RBP9.99□□□□□ -0.81
LINC00339-211ENST00000641009 TMEM182Q6ZP80 229 aaPredicted RBP9.99□□□□□ -0.81
LINC00339-211ENST00000641009 ZNF709Q8N972 641 aa9.99□□□□□ -0.81
LINC00339-211ENST00000641009 SCRT1Q9BWW7 348 aa9.99□□□□□ -0.81
LINC00339-211ENST00000641009 SRRQ9GZT4 340 aa9.99□□□□□ -0.81
LINC00339-211ENST00000641009 SLC35B3Q9H1N7 401 aa9.99□□□□□ -0.81
LINC00339-211ENST00000641009 SLC25A32Q9H2D1 315 aa9.99□□□□□ -0.81
LINC00339-211ENST00000641009 SLC25A22Q9H936 323 aa9.99□□□□□ -0.81
LINC00339-211ENST00000641009 FAT2Q9NYQ8 4349 aa9.99□□□□□ -0.81
LINC00339-211ENST00000641009 ZNF705FA8MVS1 300 aaPredicted RBP9.98□□□□□ -0.81
LINC00339-211ENST00000641009 ISLRO14498 428 aa9.98□□□□□ -0.81
LINC00339-211ENST00000641009 ADAP1O75689 374 aa9.98□□□□□ -0.81
LINC00339-211ENST00000641009 ZNF705DP0CH99 300 aaPredicted RBP9.98□□□□□ -0.81
LINC00339-211ENST00000641009 ZNF705BP0CI00 300 aaPredicted RBP9.98□□□□□ -0.81
LINC00339-211ENST00000641009 EMP1P54849 157 aa9.98□□□□□ -0.81
LINC00339-211ENST00000641009 SPANXN2Q5MJ10 180 aa9.98□□□□□ -0.81
LINC00339-211ENST00000641009 C20orf173Q96LM9 149 aa9.98□□□□□ -0.81
LINC00339-211ENST00000641009 RNF126Q9BV68 326 aa9.98□□□□□ -0.81
LINC00339-211ENST00000641009 C9orf170A2RU37 121 aa9.98□□□□□ -0.81
LINC00339-211ENST00000641009 ZNF98A6NK75 572 aa9.98□□□□□ -0.81
LINC00339-211ENST00000641009 CFDP00746 253 aaPredicted RBP9.98□□□□□ -0.81
LINC00339-211ENST00000641009 ORM2P19652 201 aa9.98□□□□□ -0.81
LINC00339-211ENST00000641009 UBE2MP61081 183 aaKnown RBP9.98□□□□□ -0.81
LINC00339-211ENST00000641009 AKR1C1Q04828 323 aa9.98□□□□□ -0.81
LINC00339-211ENST00000641009 BAK1Q16611 211 aa9.98□□□□□ -0.81
LINC00339-211ENST00000641009 FAM78BQ5VT40 261 aa9.98□□□□□ -0.81
LINC00339-211ENST00000641009 ACOT7LQ6ZUV0 252 aa9.98□□□□□ -0.81
LINC00339-211ENST00000641009 C16orf92Q96LL3 132 aa9.98□□□□□ -0.81
LINC00339-211ENST00000641009 C17orf77Q96MU5 243 aa9.98□□□□□ -0.81
LINC00339-211ENST00000641009 CLUHP3Q96NS8 147 aa9.98□□□□□ -0.81
LINC00339-211ENST00000641009 NEU1Q99519 415 aa9.98□□□□□ -0.81
LINC00339-211ENST00000641009 FLVCR2Q9UPI3 526 aa9.98□□□□□ -0.81
LINC00339-211ENST00000641009 STRAPQ9Y3F4 350 aaKnown RBP9.98□□□□□ -0.81
LINC00339-211ENST00000641009 A0A0J9YX75 114 aa9.97□□□□□ -0.81
LINC00339-211ENST00000641009 NDUFB6O95139 128 aa9.97□□□□□ -0.81
LINC00339-211ENST00000641009 AMBPP02760 352 aa9.97□□□□□ -0.81
LINC00339-211ENST00000641009 GALR1P47211 349 aa9.97□□□□□ -0.81
LINC00339-211ENST00000641009 INPP1P49441 399 aa9.97□□□□□ -0.81
LINC00339-211ENST00000641009 PAX9P55771 341 aa9.97□□□□□ -0.81
LINC00339-211ENST00000641009 POLR2GP62487 172 aaKnown RBP eCLIP9.97□□□□□ -0.81
LINC00339-211ENST00000641009 EBLN2Q6P2I7 272 aa9.97□□□□□ -0.81
LINC00339-211ENST00000641009 BPIFCQ8NFQ6 507 aa9.97□□□□□ -0.81
LINC00339-211ENST00000641009 OR1B1Q8NGR6 318 aa9.97□□□□□ -0.81
LINC00339-211ENST00000641009 RSG1Q9BU20 258 aa9.97□□□□□ -0.81
LINC00339-211ENST00000641009 LINC00854A0A1B0GVQ3 168 aa9.96□□□□□ -0.82
LINC00339-211ENST00000641009 SMIM9A6NGZ8 99 aa9.96□□□□□ -0.82
LINC00339-211ENST00000641009 MEOX2P50222 304 aa9.96□□□□□ -0.82
LINC00339-211ENST00000641009 PSG9Q00887 426 aa9.96□□□□□ -0.82
LINC00339-211ENST00000641009 ID3Q02535 119 aa9.96□□□□□ -0.82
LINC00339-211ENST00000641009 SPATA31B1PQ5VZV4 182 aa9.96□□□□□ -0.82
LINC00339-211ENST00000641009 TRIQKQ629K1 86 aa9.96□□□□□ -0.82
LINC00339-211ENST00000641009 RPRMQ9NS64 109 aa9.96□□□□□ -0.82
LINC00339-211ENST00000641009 DOK5Q9P104 306 aa9.96□□□□□ -0.82
LINC00339-211ENST00000641009 SLC45A2Q9UMX9 530 aa9.96□□□□□ -0.82
LINC00339-211ENST00000641009 PKHD1P08F94 4074 aa9.96□□□□□ -0.82
LINC00339-211ENST00000641009 DNAH17Q9UFH2 4485 aa9.95□□□□□ -0.82
LINC00339-211ENST00000641009 SMCO3A2RU48 225 aa9.95□□□□□ -0.82
LINC00339-211ENST00000641009 SSSCA1O60232 199 aa9.95□□□□□ -0.82
LINC00339-211ENST00000641009 OR4E1P0C645 316 aa9.95□□□□□ -0.82
LINC00339-211ENST00000641009 SPART-AS1P0CW21 52 aa9.95□□□□□ -0.82
LINC00339-211ENST00000641009 CNPY1Q3B7I2 92 aa9.95□□□□□ -0.82
LINC00339-211ENST00000641009 SAMD13Q5VXD3 122 aa9.95□□□□□ -0.82
LINC00339-211ENST00000641009 IGFL4Q6B9Z1 124 aa9.95□□□□□ -0.82
LINC00339-211ENST00000641009 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.95□□□□□ -0.82
LINC00339-211ENST00000641009 C1orf158Q8N1D5 194 aa9.95□□□□□ -0.82
LINC00339-211ENST00000641009 OR4D5Q8NGN0 318 aa9.95□□□□□ -0.82
LINC00339-211ENST00000641009 TMEM147Q9BVK8 224 aa9.95□□□□□ -0.82
LINC00339-211ENST00000641009 PSENENQ9NZ42 101 aa9.95□□□□□ -0.82
LINC00339-211ENST00000641009 RFNGQ9Y644 331 aa9.95□□□□□ -0.82
LINC00339-211ENST00000641009 TMEM189A5PLL7 270 aa9.94□□□□□ -0.82
LINC00339-211ENST00000641009 NAP1L6A6NFF2 107 aa9.94□□□□□ -0.82
LINC00339-211ENST00000641009 ZNF701M0R085 212 aaPredicted RBP9.94□□□□□ -0.82
LINC00339-211ENST00000641009 CCNKO75909 580 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms