RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 SEM1Q6ZVN7 128 aa10.98□□□□□ -0.65
PAX6-280ENST00000640872 VSTM2AQ8TAG5 236 aa10.98□□□□□ -0.65
PAX6-280ENST00000640872 NAV3Q8IVL0 2385 aa10.97□□□□□ -0.65
PAX6-280ENST00000640872 FAM231BA6NCW3 169 aa10.97□□□□□ -0.65
PAX6-280ENST00000640872 HSBP1L1C9JCN9 74 aa10.97□□□□□ -0.65
PAX6-280ENST00000640872 APOHP02749 345 aaPredicted RBP10.97□□□□□ -0.65
PAX6-280ENST00000640872 TCRAP04437 139 aa10.97□□□□□ -0.65
PAX6-280ENST00000640872 CRYGCP07315 174 aa10.97□□□□□ -0.65
PAX6-280ENST00000640872 GP9P14770 177 aa10.97□□□□□ -0.65
PAX6-280ENST00000640872 RNF151Q2KHN1 245 aa10.97□□□□□ -0.65
PAX6-280ENST00000640872 TEX36Q5VZQ5 186 aa10.97□□□□□ -0.65
PAX6-280ENST00000640872 LHFPL4Q7Z7J7 247 aa10.97□□□□□ -0.65
PAX6-280ENST00000640872 OR4C13Q8NGP0 309 aa10.97□□□□□ -0.65
PAX6-280ENST00000640872 OR1B1Q8NGR6 318 aa10.97□□□□□ -0.65
PAX6-280ENST00000640872 H1FXQ92522 213 aaKnown RBP10.97□□□□□ -0.65
PAX6-280ENST00000640872 MAP1LC3CQ9BXW4 147 aa10.97□□□□□ -0.65
PAX6-280ENST00000640872 SSUH2Q9Y2M2 353 aa10.97□□□□□ -0.65
PAX6-280ENST00000640872 OVOL3O00110 214 aa10.97□□□□□ -0.65
PAX6-280ENST00000640872 NBL1P41271 181 aa10.97□□□□□ -0.65
PAX6-280ENST00000640872 TIMM23BQ5SRD1 257 aa10.97□□□□□ -0.65
PAX6-280ENST00000640872 MS4A6AQ9H2W1 248 aa10.97□□□□□ -0.65
PAX6-280ENST00000640872 CST9LQ9H4G1 147 aa10.97□□□□□ -0.65
PAX6-280ENST00000640872 RELNP78509 3460 aa10.97□□□□□ -0.65
PAX6-280ENST00000640872 A0A1W2PPI3 338 aa10.96□□□□□ -0.65
PAX6-280ENST00000640872 PSG1P11464 419 aa10.96□□□□□ -0.65
PAX6-280ENST00000640872 PRSS33Q8NF86 280 aa10.96□□□□□ -0.65
PAX6-280ENST00000640872 HAX1O00165 279 aa10.96□□□□□ -0.66
PAX6-280ENST00000640872 CHEK1O14757 476 aa10.96□□□□□ -0.66
PAX6-280ENST00000640872 CCL3L1P16619 93 aa10.96□□□□□ -0.66
PAX6-280ENST00000640872 ZNF138P52744 262 aa10.96□□□□□ -0.66
PAX6-280ENST00000640872 HIST1H1AQ02539 215 aaPredicted RBP10.96□□□□□ -0.66
PAX6-280ENST00000640872 TCF15Q12870 199 aa10.96□□□□□ -0.66
PAX6-280ENST00000640872 DIAPH2-AS1Q14236 149 aa10.96□□□□□ -0.66
PAX6-280ENST00000640872 DEFB109BQ30KR1 87 aa10.96□□□□□ -0.66
PAX6-280ENST00000640872 LDLRAD2Q5SZI1 272 aa10.96□□□□□ -0.66
PAX6-280ENST00000640872 PVRIGQ6DKI7 326 aa10.96□□□□□ -0.66
PAX6-280ENST00000640872 DAZAP1Q96EP5 407 aaKnown RBP10.96□□□□□ -0.66
PAX6-280ENST00000640872 TRGV9Q99603 122 aa10.96□□□□□ -0.66
PAX6-280ENST00000640872 MCRIP2Q9BUT9 160 aaKnown RBP10.96□□□□□ -0.66
PAX6-280ENST00000640872 Q9H3A6 140 aa10.96□□□□□ -0.66
PAX6-280ENST00000640872 MBD3L4A6NDZ8 208 aaPredicted RBP10.95□□□□□ -0.66
PAX6-280ENST00000640872 MBD3L3A6NE82 208 aaPredicted RBP10.95□□□□□ -0.66
PAX6-280ENST00000640872 MBD3L5A6NJ08 208 aaPredicted RBP10.95□□□□□ -0.66
PAX6-280ENST00000640872 CD5LO43866 347 aa10.95□□□□□ -0.66
PAX6-280ENST00000640872 MRGPRG-AS1Q2M3A8 158 aa10.95□□□□□ -0.66
PAX6-280ENST00000640872 C3orf36Q3SXR2 165 aa10.95□□□□□ -0.66
PAX6-280ENST00000640872 OCIAD2Q56VL3 154 aa10.95□□□□□ -0.66
PAX6-280ENST00000640872 LINC01545Q5VT33 79 aa10.95□□□□□ -0.66
PAX6-280ENST00000640872 ZNF474Q6S9Z5 364 aaPredicted RBP10.95□□□□□ -0.66
PAX6-280ENST00000640872 C16orf54Q6UWD8 224 aa10.95□□□□□ -0.66
PAX6-280ENST00000640872 IGFL2Q6UWQ7 119 aa10.95□□□□□ -0.66
PAX6-280ENST00000640872 Q86TA4 180 aa10.95□□□□□ -0.66
PAX6-280ENST00000640872 MBD3L2Q8NHZ7 208 aaPredicted RBP10.95□□□□□ -0.66
PAX6-280ENST00000640872 HSPB8Q9UJY1 196 aa10.95□□□□□ -0.66
PAX6-280ENST00000640872 CBY3A6NI87 242 aa10.95□□□□□ -0.66
PAX6-280ENST00000640872 MEF2CQ06413 473 aaPredicted RBP10.95□□□□□ -0.66
PAX6-280ENST00000640872 AMMECR1LQ6DCA0 310 aa10.95□□□□□ -0.66
PAX6-280ENST00000640872 FAM71F2Q6NXP2 309 aa10.95□□□□□ -0.66
PAX6-280ENST00000640872 OR10X1Q8NGY0 326 aa10.95□□□□□ -0.66
PAX6-280ENST00000640872 TMUB1Q9BVT8 246 aa10.95□□□□□ -0.66
PAX6-280ENST00000640872 TPSG1Q9NRR2 321 aa10.95□□□□□ -0.66
PAX6-280ENST00000640872 RNF24Q9Y225 148 aa10.95□□□□□ -0.66
PAX6-280ENST00000640872 A0A087X0K7 114 aa10.94□□□□□ -0.66
PAX6-280ENST00000640872 TRAV17A0A0B4J275 112 aa10.94□□□□□ -0.66
PAX6-280ENST00000640872 H3BTX0 84 aa10.94□□□□□ -0.66
PAX6-280ENST00000640872 FCN3O75636 299 aa10.94□□□□□ -0.66
PAX6-280ENST00000640872 TOX4O94842 621 aa10.94□□□□□ -0.66
PAX6-280ENST00000640872 FAM87AP0C7U9 286 aa10.94□□□□□ -0.66
PAX6-280ENST00000640872 ETFRF1Q6IPR1 90 aa10.94□□□□□ -0.66
PAX6-280ENST00000640872 ARFGEF3Q5TH69 2177 aa10.94□□□□□ -0.66
PAX6-280ENST00000640872 APC2O95996 2303 aa10.94□□□□□ -0.66
PAX6-280ENST00000640872 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.94□□□□□ -0.66
PAX6-280ENST00000640872 PSG9Q00887 426 aa10.94□□□□□ -0.66
PAX6-280ENST00000640872 NEU4Q8WWR8 484 aaPredicted RBP10.94□□□□□ -0.66
PAX6-280ENST00000640872 ZZEF1O43149 2961 aa10.93□□□□□ -0.66
PAX6-280ENST00000640872 SLC25A17O43808 307 aa10.93□□□□□ -0.66
PAX6-280ENST00000640872 COL8A1P27658 744 aa10.93□□□□□ -0.66
PAX6-280ENST00000640872 PLP1P60201 277 aa10.93□□□□□ -0.66
PAX6-280ENST00000640872 C2orf91Q6ZV80 131 aa10.93□□□□□ -0.66
PAX6-280ENST00000640872 CIARTQ8N365 385 aaPredicted RBP10.93□□□□□ -0.66
PAX6-280ENST00000640872 IGLV2-11P01706 119 aa10.92□□□□□ -0.66
PAX6-280ENST00000640872 COX8AP10176 69 aa10.92□□□□□ -0.66
PAX6-280ENST00000640872 GPR183P32249 361 aa10.92□□□□□ -0.66
PAX6-280ENST00000640872 TMEM200BQ69YZ2 307 aa10.92□□□□□ -0.66
PAX6-280ENST00000640872 HCP5Q6MZN7 132 aa10.92□□□□□ -0.66
PAX6-280ENST00000640872 Q71RC1 249 aaPredicted RBP10.92□□□□□ -0.66
PAX6-280ENST00000640872 TMEM116Q8NCL8 245 aa10.92□□□□□ -0.66
PAX6-280ENST00000640872 TMEM186Q96B77 213 aa10.92□□□□□ -0.66
PAX6-280ENST00000640872 PMCHL2Q9BQD1 86 aa10.92□□□□□ -0.66
PAX6-280ENST00000640872 ACACAQ13085 2346 aa10.92□□□□□ -0.66
PAX6-280ENST00000640872 TRAV8-1A0A0A6YYK1 113 aa10.92□□□□□ -0.66
PAX6-280ENST00000640872 TRAV8-6A0A0B4J262 113 aa10.92□□□□□ -0.66
PAX6-280ENST00000640872 H0Y8G0 127 aa10.92□□□□□ -0.66
PAX6-280ENST00000640872 HOXB4P17483 251 aaPredicted RBP10.92□□□□□ -0.66
PAX6-280ENST00000640872 FOXE3Q13461 319 aa10.92□□□□□ -0.66
PAX6-280ENST00000640872 VMA21Q3ZAQ7 101 aa10.92□□□□□ -0.66
PAX6-280ENST00000640872 LINC00311Q8N616 119 aa10.92□□□□□ -0.66
PAX6-280ENST00000640872 C8orf46Q8TAG6 207 aa10.92□□□□□ -0.66
PAX6-280ENST00000640872 RITA1Q96K30 269 aa10.92□□□□□ -0.66
PAX6-280ENST00000640872 OTORQ9NRC9 128 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms